| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355939
Identifier: 78355939
GI number: 78355939
Start: 920440
End: 921606
Strand: Reverse
Name: 78355939
Synonym: Dde_0892
Alternate gene names: NA
Gene position: 921606-920440 (Counterclockwise)
Preceding gene: 78355940
Following gene: 78355938
Centisome position: 24.71
GC content: 52.36
Gene sequence:
>1167_bases ATGGCAACTTTAAACCTTCGCCGCTTTTCGAAGCCGGAAATGCTCCGGAAGATCGACCGGAGCCATCTGATCACATTTCT TGAGCCCTACACCGAATATCTATCCGGGCGAGGGATAGAGTTGCCATCGGCAGCCGCAGAAAACGGACTGGATTATACAG TCATGAGTAACGTGCTGCTGAACCCGAACACCAGCACACCTCCTGAGATGTCGGAAGCTCTCTATTACATTAACGAGATG TCGACTCCTGAAGGCTTCGACCTGATACAGGAGGCCATTGCCGACACTGAGATCGATGTCAACATCTCCGAAGATGCCGC TTACGGTGACCTGGCTTTGCAGGTATGGGTGCAGGACCGCAACATCATCGAGCGACTCCATGCCGAGCAGTTCCTGTTTC GCCCGCGCTCATTTGAATATTTCAAATGCACCCGTGAAACCATTCCTGATTTTGAAGAGCCAAGCGAAGAAACCATCACC GCCCTCGAAGCGGATCTGGATGAATGGTTTGCCAAGAAACGCCGTGGCCGTGCTTCCAAGGTTTTCATCTATGTGAAAGA GGACTATGTCTGGTTCCTTGTCCGCCATGGAGAGCCATTCACCCGGGAGTCGATCATCAAGGATGGTGAATCCAAAAGCC TGTTCTATCGGCCGGAAAAATATGACGTGCTCGTTTACAGCCCGGAAAATGGTGAGATCCGGATGAACGCCCGCTCCAAG GGTGAAAAGGAACTGTACCGCACGAAGTTTGGCCTGCACCTTTTCGGTGACAGCGAGTTTTTCGACGGCAAAAGCAAATT CACATTGGAGCCCTTACGGGAGGTAGGTTCGGCGTCCGTCCTCTGTGATGATGTTGAAGGGATTGATTGGGTGCGCCTGA AGGAGTTCCAGATCTTCCGTGGCGGAACACACAAAGAGATCGAGATCCGCAAAGCCGAGGACATCTTTGCTTCATTGGAA GAGCGAGAGCGCACGATTCCCAACGGTGGGCGATTGAGCAAGGCCAGCTTCCAGATCAAGTTTTCCGATTCCAAAACACC GCGAACCGTTACACTCAGCTCTGGTAACCGGGCTCAGTTCAAACGGGATGATGACGCCGAGATTCTTGAAGAGTGGCTGA TCCGCCGGGGCTTTATCATCGTTGATTCGGAGGATGACGGTGAGTGA
Upstream 100 bases:
>100_bases AAGATGAATTGAGGATTCTCGGCAAAGTGGTGGGCCGTAAACGAATTTGAGAGAACACTATGTAAGGACAGCTATAAGCT AAAAAAAACAGGAGAAATTA
Downstream 100 bases:
>100_bases AACCCGGCTTTGGCAATTCTTAGAAGAGCACCCTAAGCAGAATGCCCCGTGGTGTGAATGGCAGGATGAGTTTGGCGGCT GGGATTCCTTCAACGGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MATLNLRRFSKPEMLRKIDRSHLITFLEPYTEYLSGRGIELPSAAAENGLDYTVMSNVLLNPNTSTPPEMSEALYYINEM STPEGFDLIQEAIADTEIDVNISEDAAYGDLALQVWVQDRNIIERLHAEQFLFRPRSFEYFKCTRETIPDFEEPSEETIT ALEADLDEWFAKKRRGRASKVFIYVKEDYVWFLVRHGEPFTRESIIKDGESKSLFYRPEKYDVLVYSPENGEIRMNARSK GEKELYRTKFGLHLFGDSEFFDGKSKFTLEPLREVGSASVLCDDVEGIDWVRLKEFQIFRGGTHKEIEIRKAEDIFASLE ERERTIPNGGRLSKASFQIKFSDSKTPRTVTLSSGNRAQFKRDDDAEILEEWLIRRGFIIVDSEDDGE
Sequences:
>Translated_388_residues MATLNLRRFSKPEMLRKIDRSHLITFLEPYTEYLSGRGIELPSAAAENGLDYTVMSNVLLNPNTSTPPEMSEALYYINEM STPEGFDLIQEAIADTEIDVNISEDAAYGDLALQVWVQDRNIIERLHAEQFLFRPRSFEYFKCTRETIPDFEEPSEETIT ALEADLDEWFAKKRRGRASKVFIYVKEDYVWFLVRHGEPFTRESIIKDGESKSLFYRPEKYDVLVYSPENGEIRMNARSK GEKELYRTKFGLHLFGDSEFFDGKSKFTLEPLREVGSASVLCDDVEGIDWVRLKEFQIFRGGTHKEIEIRKAEDIFASLE ERERTIPNGGRLSKASFQIKFSDSKTPRTVTLSSGNRAQFKRDDDAEILEEWLIRRGFIIVDSEDDGE >Mature_387_residues ATLNLRRFSKPEMLRKIDRSHLITFLEPYTEYLSGRGIELPSAAAENGLDYTVMSNVLLNPNTSTPPEMSEALYYINEMS TPEGFDLIQEAIADTEIDVNISEDAAYGDLALQVWVQDRNIIERLHAEQFLFRPRSFEYFKCTRETIPDFEEPSEETITA LEADLDEWFAKKRRGRASKVFIYVKEDYVWFLVRHGEPFTRESIIKDGESKSLFYRPEKYDVLVYSPENGEIRMNARSKG EKELYRTKFGLHLFGDSEFFDGKSKFTLEPLREVGSASVLCDDVEGIDWVRLKEFQIFRGGTHKEIEIRKAEDIFASLEE RERTIPNGGRLSKASFQIKFSDSKTPRTVTLSSGNRAQFKRDDDAEILEEWLIRRGFIIVDSEDDGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44928; Mature: 44797
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLNLRRFSKPEMLRKIDRSHLITFLEPYTEYLSGRGIELPSAAAENGLDYTVMSNVLL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEEEEE NPNTSTPPEMSEALYYINEMSTPEGFDLIQEAIADTEIDVNISEDAAYGDLALQVWVQDR CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCH NIIERLHAEQFLFRPRSFEYFKCTRETIPDFEEPSEETITALEADLDEWFAKKRRGRASK HHHHHHHHHHHHCCCCCCHHEEECHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEE VFIYVKEDYVWFLVRHGEPFTRESIIKDGESKSLFYRPEKYDVLVYSPENGEIRMNARSK EEEEEECCEEEEEEECCCCCCHHHHHCCCCCCCEEECCCCEEEEEECCCCCEEEECCCCC GEKELYRTKFGLHLFGDSEFFDGKSKFTLEPLREVGSASVLCDDVEGIDWVRLKEFQIFR CHHHHHHHHCCEEEECCCCEECCCCCEEHHHHHHCCCCEEEEECCCCCCEEEEEEEEEEE GGTHKEIEIRKAEDIFASLEERERTIPNGGRLSKASFQIKFSDSKTPRTVTLSSGNRAQF CCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCEEEECCCCCCCC KRDDDAEILEEWLIRRGFIIVDSEDDGE CCCCCHHHHHHHHHHCCEEEEECCCCCC >Mature Secondary Structure ATLNLRRFSKPEMLRKIDRSHLITFLEPYTEYLSGRGIELPSAAAENGLDYTVMSNVLL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEEEEE NPNTSTPPEMSEALYYINEMSTPEGFDLIQEAIADTEIDVNISEDAAYGDLALQVWVQDR CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCH NIIERLHAEQFLFRPRSFEYFKCTRETIPDFEEPSEETITALEADLDEWFAKKRRGRASK HHHHHHHHHHHHCCCCCCHHEEECHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEE VFIYVKEDYVWFLVRHGEPFTRESIIKDGESKSLFYRPEKYDVLVYSPENGEIRMNARSK EEEEEECCEEEEEEECCCCCCHHHHHCCCCCCCEEECCCCEEEEEECCCCCEEEECCCCC GEKELYRTKFGLHLFGDSEFFDGKSKFTLEPLREVGSASVLCDDVEGIDWVRLKEFQIFR CHHHHHHHHCCEEEECCCCEECCCCCEEHHHHHHCCCCEEEEECCCCCCEEEEEEEEEEE GGTHKEIEIRKAEDIFASLEERERTIPNGGRLSKASFQIKFSDSKTPRTVTLSSGNRAQF CCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCEEEECCCCCCCC KRDDDAEILEEWLIRRGFIIVDSEDDGE CCCCCHHHHHHHHHHCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA