| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is ybhG [C]
Identifier: 78355872
GI number: 78355872
Start: 848561
End: 849655
Strand: Reverse
Name: ybhG [C]
Synonym: Dde_0825
Alternate gene names: 78355872
Gene position: 849655-848561 (Counterclockwise)
Preceding gene: 78355873
Following gene: 78355871
Centisome position: 22.78
GC content: 60.64
Gene sequence:
>1095_bases ATGAAGCAGCTGGCAGTTATTGTCCTGTTGCTCGCCCTCGCGGGGGGAGCTTACTACGTTCTCAGGCAGGAGCTTGAAAA AAATCCCGCCGTGCTGCTGGATTCCAGTCCGGCAGCCGAGCAGGTTGAAATGCGCCCCGCGCGCATGGCCGTGGCTCCCG GTGTTGTGGAACCGGTGTCGGAAGAACGCAGGCTGGGATTTGAAGTAAACGGCGTGGTGCATGAAGTAATGGTAACCGAA GGGCAGCCCGTGACACAGGGGGCACTGCTGGCCACACTGCGCGACGAAGAACAGCGGGCCGCTCTGGCCGCTGCCGAAGC CGAAGCCGCCGCCGCACAGGCAGAGTATGACAAACTGATCCGCGGAGCCCGGCCGGCTGAAAAGAGTGAAGCATGGGCCG CCGTGCGCAGCGCGCGTGCCATACGTGATCAGGCCCTGAAAGAAGCCAAACGCCGTGAGCAGCTTGCCGCGCAGAAACAC ATCGCACCGGAAGAAGCCGACAGGGCATGGAAGGATTACCGCGTGGCAGCCGAACAGTATGAAGAAGCCAGACAACGCTT TGTGCTGGTGGAAGACATGTTCCGCAAAGAAGACATCGCCAAAGCTTCCTTTCAGTTGCAGAGCGCCACGGCGCGGGTGC GCGAAGCCGAAGCGGCTCTGGCCAAAACACGTTTGCGGGCAACGGTTTCCGGCACGGTGCTGCGTGTCAACCGCAAGGCC GGAGAGGTTTTTTCGCTTTTTTACGACAGCCCCGTCATTACCATAGGCAACATAGCAACTCTGAATGTGCGTGTGGAAGT GGATGAAAAAGACGTGGCCAGAGTACGCGCGGGACAGCCCGCCTATGTGGTGGCCGATGCATACGGCGACACACGTTTTG AAGGAACCGTCACCCGGGTGGAACTGGTGATGGGTAAAAAACATACCCGCACCGGCGACCCTGCCGAGCATATGGACAGG CGGGTGCGGGAAGTGCTTGTGACTCTGCGGGGAACCCCGCCGCTTGTCAGCGGTCTGCGGGTGGACGCCTACATCGACAC CGGCACCACGCGCGCACAGGCCGCAGAAACAACCAGAGGAGCACAACAACCTTGA
Upstream 100 bases:
>100_bases TCATTGTGACGCACGACAACCGCATTACCGGTTTTGCAGACAGAGTGGTACGCATAGAAGACGGCAGGCTGCATCCGGAC AGCCCTGCGGAGGAAACAGC
Downstream 100 bases:
>100_bases CCCCGTCACACAACCGGCCCCGCACCGCCGGCGGCCTGCACGACATTCTGCCGCGGATACTGCCTTTTTGCTGTTACATG GTGTTCATAGCAGCGCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MKQLAVIVLLLALAGGAYYVLRQELEKNPAVLLDSSPAAEQVEMRPARMAVAPGVVEPVSEERRLGFEVNGVVHEVMVTE GQPVTQGALLATLRDEEQRAALAAAEAEAAAAQAEYDKLIRGARPAEKSEAWAAVRSARAIRDQALKEAKRREQLAAQKH IAPEEADRAWKDYRVAAEQYEEARQRFVLVEDMFRKEDIAKASFQLQSATARVREAEAALAKTRLRATVSGTVLRVNRKA GEVFSLFYDSPVITIGNIATLNVRVEVDEKDVARVRAGQPAYVVADAYGDTRFEGTVTRVELVMGKKHTRTGDPAEHMDR RVREVLVTLRGTPPLVSGLRVDAYIDTGTTRAQAAETTRGAQQP
Sequences:
>Translated_364_residues MKQLAVIVLLLALAGGAYYVLRQELEKNPAVLLDSSPAAEQVEMRPARMAVAPGVVEPVSEERRLGFEVNGVVHEVMVTE GQPVTQGALLATLRDEEQRAALAAAEAEAAAAQAEYDKLIRGARPAEKSEAWAAVRSARAIRDQALKEAKRREQLAAQKH IAPEEADRAWKDYRVAAEQYEEARQRFVLVEDMFRKEDIAKASFQLQSATARVREAEAALAKTRLRATVSGTVLRVNRKA GEVFSLFYDSPVITIGNIATLNVRVEVDEKDVARVRAGQPAYVVADAYGDTRFEGTVTRVELVMGKKHTRTGDPAEHMDR RVREVLVTLRGTPPLVSGLRVDAYIDTGTTRAQAAETTRGAQQP >Mature_364_residues MKQLAVIVLLLALAGGAYYVLRQELEKNPAVLLDSSPAAEQVEMRPARMAVAPGVVEPVSEERRLGFEVNGVVHEVMVTE GQPVTQGALLATLRDEEQRAALAAAEAEAAAAQAEYDKLIRGARPAEKSEAWAAVRSARAIRDQALKEAKRREQLAAQKH IAPEEADRAWKDYRVAAEQYEEARQRFVLVEDMFRKEDIAKASFQLQSATARVREAEAALAKTRLRATVSGTVLRVNRKA GEVFSLFYDSPVITIGNIATLNVRVEVDEKDVARVRAGQPAYVVADAYGDTRFEGTVTRVELVMGKKHTRTGDPAEHMDR RVREVLVTLRGTPPLVSGLRVDAYIDTGTTRAQAAETTRGAQQP
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0194 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 - InterPro: IPR022936 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 39950; Mature: 39950
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLAVIVLLLALAGGAYYVLRQELEKNPAVLLDSSPAAEQVEMRPARMAVAPGVVEPVS CHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCHHHHHCCHHHHHCCCCCCCCCC EERRLGFEVNGVVHEVMVTEGQPVTQGALLATLRDEEQRAALAAAEAEAAAAQAEYDKLI HHHHCCEEHHHHEEEEEEECCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH RGARPAEKSEAWAAVRSARAIRDQALKEAKRREQLAAQKHIAPEEADRAWKDYRVAAEQY HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH EEARQRFVLVEDMFRKEDIAKASFQLQSATARVREAEAALAKTRLRATVSGTVLRVNRKA HHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCC GEVFSLFYDSPVITIGNIATLNVRVEVDEKDVARVRAGQPAYVVADAYGDTRFEGTVTRV CCEEEEEECCCEEEECCEEEEEEEEEECCHHHHHHHCCCCCEEEEECCCCCCCCCHHEEE ELVMGKKHTRTGDPAEHMDRRVREVLVTLRGTPPLVSGLRVDAYIDTGTTRAQAAETTRG EEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCEEEEEEECCCCHHHHHHHCCC AQQP CCCC >Mature Secondary Structure MKQLAVIVLLLALAGGAYYVLRQELEKNPAVLLDSSPAAEQVEMRPARMAVAPGVVEPVS CHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCHHHHHCCHHHHHCCCCCCCCCC EERRLGFEVNGVVHEVMVTEGQPVTQGALLATLRDEEQRAALAAAEAEAAAAQAEYDKLI HHHHCCEEHHHHEEEEEEECCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH RGARPAEKSEAWAAVRSARAIRDQALKEAKRREQLAAQKHIAPEEADRAWKDYRVAAEQY HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH EEARQRFVLVEDMFRKEDIAKASFQLQSATARVREAEAALAKTRLRATVSGTVLRVNRKA HHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCC GEVFSLFYDSPVITIGNIATLNVRVEVDEKDVARVRAGQPAYVVADAYGDTRFEGTVTRV CCEEEEEECCCEEEECCEEEEEEEEEECCHHHHHHHCCCCCEEEEECCCCCCCCCHHEEE ELVMGKKHTRTGDPAEHMDRRVREVLVTLRGTPPLVSGLRVDAYIDTGTTRAQAAETTRG EEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCEEEEEEECCCCHHHHHHHCCC AQQP CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA