| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355871
Identifier: 78355871
GI number: 78355871
Start: 847836
End: 848564
Strand: Reverse
Name: 78355871
Synonym: Dde_0824
Alternate gene names: NA
Gene position: 848564-847836 (Counterclockwise)
Preceding gene: 78355872
Following gene: 78355870
Centisome position: 22.75
GC content: 57.61
Gene sequence:
>729_bases TTGACCCCGTCACACAACCGGCCCCGCACCGCCGGCGGCCTGCACGACATTCTGCCGCGGATACTGCCTTTTTGCTGTTA CATGGTGTTCATAGCAGCGCGCGAGGTTTCTGTTCTTTTTTCCGGCATGTCGGACAAACTGACAGATACCGTTTCTTTTA TATATCCTGTGCAAATAGCCATAGTGGTCGCAGCCCTGTGCTATGCCGTACCCCGCTGCCCCGAGCTTTCGCTGCGGGAC GTGGGACTTTCGGGCAGCCGCGGACGCAATACACTGTTTTCCGCAGCCACCGGCGTCGCGGTCTTTGCCATATGGATTCA TCTTGACCTGCCGTGGGCACGCATAGGAACCCCTGCGGGTTTTTCGCCCGACATCGCCGAACCGGGACTGCCCCGTAACG CCCTGCTGGCCGTGCGGCTGGCCGGAGCCACTCTGGTGGTGCCCGTGATGGAAGAATTGTTCTGGCGCTCGTTCCTCATA CGCTATATCCGCAAACCCGACTTCACCAGCGTGCCCGCCGGTTCACTGCACTGGCCTTCTTTCTGCGCTGTGGCGTTACT TTTCGGTCTGGAGCATCATCTGGTTGTCGCCGGCACAATTGCAGGAATTGCTTACAATATCGTGCTGATACGCACCGGAA GCATTATGCAGTGCGTGCTTTCACATGCCGTTACCAACGGGATGCTCGGAGTGTGGGTCATACTTACCGGTTCATGGTCA TTCTGGTAA
Upstream 100 bases:
>100_bases GAACCCCGCCGCTTGTCAGCGGTCTGCGGGTGGACGCCTACATCGACACCGGCACCACGCGCGCACAGGCCGCAGAAACA ACCAGAGGAGCACAACAACC
Downstream 100 bases:
>100_bases ACCGCCTGACAGGTGCGGTCGGCTTTTTTTACAGATAATCTATATCACGGGCAAGGAGCATATTCACAACTAACTGATAT TATGCAGCTTACCCACATGG
Product: CAAX amino terminal protease family protein
Products: NA
Alternate protein names: CAAX Prenyl Protease-Related Protein; CAAX Amino Terminal Protease Family Protein; Caax Prenyl Protease-Related Protein; Protease Abi Superfamily
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MTPSHNRPRTAGGLHDILPRILPFCCYMVFIAAREVSVLFSGMSDKLTDTVSFIYPVQIAIVVAALCYAVPRCPELSLRD VGLSGSRGRNTLFSAATGVAVFAIWIHLDLPWARIGTPAGFSPDIAEPGLPRNALLAVRLAGATLVVPVMEELFWRSFLI RYIRKPDFTSVPAGSLHWPSFCAVALLFGLEHHLVVAGTIAGIAYNIVLIRTGSIMQCVLSHAVTNGMLGVWVILTGSWS FW
Sequences:
>Translated_242_residues MTPSHNRPRTAGGLHDILPRILPFCCYMVFIAAREVSVLFSGMSDKLTDTVSFIYPVQIAIVVAALCYAVPRCPELSLRD VGLSGSRGRNTLFSAATGVAVFAIWIHLDLPWARIGTPAGFSPDIAEPGLPRNALLAVRLAGATLVVPVMEELFWRSFLI RYIRKPDFTSVPAGSLHWPSFCAVALLFGLEHHLVVAGTIAGIAYNIVLIRTGSIMQCVLSHAVTNGMLGVWVILTGSWS FW >Mature_241_residues TPSHNRPRTAGGLHDILPRILPFCCYMVFIAAREVSVLFSGMSDKLTDTVSFIYPVQIAIVVAALCYAVPRCPELSLRDV GLSGSRGRNTLFSAATGVAVFAIWIHLDLPWARIGTPAGFSPDIAEPGLPRNALLAVRLAGATLVVPVMEELFWRSFLIR YIRKPDFTSVPAGSLHWPSFCAVALLFGLEHHLVVAGTIAGIAYNIVLIRTGSIMQCVLSHAVTNGMLGVWVILTGSWSF W
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26304; Mature: 26173
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSHNRPRTAGGLHDILPRILPFCCYMVFIAAREVSVLFSGMSDKLTDTVSFIYPVQIA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH IVVAALCYAVPRCPELSLRDVGLSGSRGRNTLFSAATGVAVFAIWIHLDLPWARIGTPAG HHHHHHHHHCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC FSPDIAEPGLPRNALLAVRLAGATLVVPVMEELFWRSFLIRYIRKPDFTSVPAGSLHWPS CCCCCCCCCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH FCAVALLFGLEHHLVVAGTIAGIAYNIVLIRTGSIMQCVLSHAVTNGMLGVWVILTGSWS HHHHHHHHCCCCHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCC FW CC >Mature Secondary Structure TPSHNRPRTAGGLHDILPRILPFCCYMVFIAAREVSVLFSGMSDKLTDTVSFIYPVQIA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH IVVAALCYAVPRCPELSLRDVGLSGSRGRNTLFSAATGVAVFAIWIHLDLPWARIGTPAG HHHHHHHHHCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC FSPDIAEPGLPRNALLAVRLAGATLVVPVMEELFWRSFLIRYIRKPDFTSVPAGSLHWPS CCCCCCCCCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH FCAVALLFGLEHHLVVAGTIAGIAYNIVLIRTGSIMQCVLSHAVTNGMLGVWVILTGSWS HHHHHHHHCCCCHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCC FW CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA