Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is yqgX [H]

Identifier: 78355833

GI number: 78355833

Start: 806743

End: 807369

Strand: Reverse

Name: yqgX [H]

Synonym: Dde_0786

Alternate gene names: 78355833

Gene position: 807369-806743 (Counterclockwise)

Preceding gene: 78355834

Following gene: 78355832

Centisome position: 21.64

GC content: 57.1

Gene sequence:

>627_bases
ATGACCATACGCACATTTCCCATCGGACCGCTGGAAACAAACTGCCACATATTGTCCCATCAGGGGCAGGCTCTTGCTGT
GGACCCCGGCGGCGATCCCGCACAGCTGCTGGAATACTGCACAGAAAAATCACTGCAGCTTAAGCATATTCTGCTGACCC
ACCTGCATTTTGACCACCTGTACGGCGTGGCGGCACTGGCAGAGCGCACCGGCGCACAGGTTTCCGCCAACAACGCGGAT
GCCTACCTGATGCAGACAGAACTGGGCAAGGGAGGCATGTTCGGGTTCCCCCGTGTGCAGCCGTTTGATTTCACGGCGCT
GGAGGCAGGGGAACACACGTTCATAGGGCTTTCCTGCACCGTGCTGGAAACCCCCGGCCATACTCCGGGCAGCTTTTCCT
TTTACTTTCCGCAGGCAGAAGCCGTCTTTGTGGGCGATCTGCTGTTCCATCGCTCCGTAGGGCGGACAGACTTTCCGGGC
GGAGACTCTGCAACGCTGCTGAATTCGGTAAAAAAAGCCATTTTCAGTCTGCCGGACACCACCGTGGTCTACCCCGGACA
CGGCATAGAAACCACAGTGGGCGACGAAAAACTGAACAACCCGTTTTTTACCGAGTTCCGGAGATAG

Upstream 100 bases:

>100_bases
CGCCGGTCACCCCGCGCAGAACGGATCATCATCGCGCAGACCGCTGGCCGAACTTTTGCTGGAAGAACCTTTTCCCCAAC
CCGAATAAAACGAGACCGTC

Downstream 100 bases:

>100_bases
ATTAAACTGTAATTTCGTTGTAAGAGGACAAAAATATGCCCGAAGAACGCATTGACCTGCGTAACAAATGCTGAGGTGTC
TCGCTGGAGATAAGTTGGTA

Product: metallo-beta-lactamase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MTIRTFPIGPLETNCHILSHQGQALAVDPGGDPAQLLEYCTEKSLQLKHILLTHLHFDHLYGVAALAERTGAQVSANNAD
AYLMQTELGKGGMFGFPRVQPFDFTALEAGEHTFIGLSCTVLETPGHTPGSFSFYFPQAEAVFVGDLLFHRSVGRTDFPG
GDSATLLNSVKKAIFSLPDTTVVYPGHGIETTVGDEKLNNPFFTEFRR

Sequences:

>Translated_208_residues
MTIRTFPIGPLETNCHILSHQGQALAVDPGGDPAQLLEYCTEKSLQLKHILLTHLHFDHLYGVAALAERTGAQVSANNAD
AYLMQTELGKGGMFGFPRVQPFDFTALEAGEHTFIGLSCTVLETPGHTPGSFSFYFPQAEAVFVGDLLFHRSVGRTDFPG
GDSATLLNSVKKAIFSLPDTTVVYPGHGIETTVGDEKLNNPFFTEFRR
>Mature_207_residues
TIRTFPIGPLETNCHILSHQGQALAVDPGGDPAQLLEYCTEKSLQLKHILLTHLHFDHLYGVAALAERTGAQVSANNADA
YLMQTELGKGGMFGFPRVQPFDFTALEAGEHTFIGLSCTVLETPGHTPGSFSFYFPQAEAVFVGDLLFHRSVGRTDFPGG
DSATLLNSVKKAIFSLPDTTVVYPGHGIETTVGDEKLNNPFFTEFRR

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Homo sapiens, GI41327741, Length=196, Percent_Identity=30.1020408163265, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI1787158, Length=210, Percent_Identity=36.1904761904762, Blast_Score=131, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI17538952, Length=204, Percent_Identity=32.3529411764706, Blast_Score=91, Evalue=4e-19,
Organism=Drosophila melanogaster, GI221330176, Length=190, Percent_Identity=31.0526315789474, Blast_Score=87, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 22657; Mature: 22526

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRTFPIGPLETNCHILSHQGQALAVDPGGDPAQLLEYCTEKSLQLKHILLTHLHFDHL
CEEEECCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
YGVAALAERTGAQVSANNADAYLMQTELGKGGMFGFPRVQPFDFTALEAGEHTFIGLSCT
HHHHHHHHHCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCEEEEEEEEE
VLETPGHTPGSFSFYFPQAEAVFVGDLLFHRSVGRTDFPGGDSATLLNSVKKAIFSLPDT
EEECCCCCCCCEEEECCCCCEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
TVVYPGHGIETTVGDEKLNNPFFTEFRR
EEEECCCCCCCCCCCHHCCCCHHHHCCC
>Mature Secondary Structure 
TIRTFPIGPLETNCHILSHQGQALAVDPGGDPAQLLEYCTEKSLQLKHILLTHLHFDHL
EEEECCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
YGVAALAERTGAQVSANNADAYLMQTELGKGGMFGFPRVQPFDFTALEAGEHTFIGLSCT
HHHHHHHHHCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCEEEEEEEEE
VLETPGHTPGSFSFYFPQAEAVFVGDLLFHRSVGRTDFPGGDSATLLNSVKKAIFSLPDT
EEECCCCCCCCEEEECCCCCEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
TVVYPGHGIETTVGDEKLNNPFFTEFRR
EEEECCCCCCCCCCCHHCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]