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The map label for this gene is ybjZ [C]

Identifier: 78355780

GI number: 78355780

Start: 760465

End: 761157

Strand: Reverse

Name: ybjZ [C]

Synonym: Dde_0733

Alternate gene names: 78355780

Gene position: 761157-760465 (Counterclockwise)

Preceding gene: 78355781

Following gene: 78355779

Centisome position: 20.41

GC content: 62.05

Gene sequence:

>693_bases
ATGACCCCGCATGACGCCCGAAAGCACACCCGCCCCGAAGAAAAGCGCAGGCAGATCGTCCTGCCTTTCAGCAAATCGGT
GGAGATAGCCTGGCGCAATCTGCGGGCACGCCTTTTCCGCTCACTGATCACGGCTGGCAGTCTGGTGCTGGCCGTGGCAT
TTCTGTCTTTTGTGCTGGTCAGCACCGATATTGCCTCCGGTCTGGCGCGCCACGGCAGTGCCGGGACCCTGCGCGCGCTG
TACCGTGCCGGTTTTGATGTGGACACGGTTACCGGAGCGGTTCAGGCGGGGGCAAAAGACAGATGGATCATCATCCTTTC
GTTGCTGGTCTGTACCGTGGGTATAGTCAATGCCCAGATGATGTCCGTTACGGAACGGTTCCGCGAAATCGGCATCATGA
AGTGCCTGGGGGCGCTTGATTCCATGATTCTGCGGCTGTTTCTGCTGGAGGCTGTAATGCAGGGTGTCGCCGGATCCGCC
GCGGGCGCCGTTGCCGGACTGGCTGCGGCCATATCGGGCGGGCTGGCACGTTTCGGAACCGATGCCGTCACCCTGCTGCC
GTGGAGCGATGTGCTGCTTTCCCTTGTACAGGCCACGGGCACAGGGTTGATTCTCAGCCTTGCCGCGGTGCTGTATCCGG
CCATTGTGGCCGCCCGTATGCCGCCCGTGGCAGCCATGCGGGCAGACCTGTAA

Upstream 100 bases:

>100_bases
CATCCGCACCTGCATGTTGTTGATGTCCGCCGTTATATGTTATGAATAGGGTACCACCCGTCACAATCAATGGTACCGCT
CCGGCGACAGAAAGGACAGC

Downstream 100 bases:

>100_bases
ATCCTGCCGCCATGCCGCAGGGCCACACCGCAGGCACGCACCGGTCGGCGGGGTGTAACCATTCACGGGATATTTTCTGA
TGCACACACGCGACAAACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MTPHDARKHTRPEEKRRQIVLPFSKSVEIAWRNLRARLFRSLITAGSLVLAVAFLSFVLVSTDIASGLARHGSAGTLRAL
YRAGFDVDTVTGAVQAGAKDRWIIILSLLVCTVGIVNAQMMSVTERFREIGIMKCLGALDSMILRLFLLEAVMQGVAGSA
AGAVAGLAAAISGGLARFGTDAVTLLPWSDVLLSLVQATGTGLILSLAAVLYPAIVAARMPPVAAMRADL

Sequences:

>Translated_230_residues
MTPHDARKHTRPEEKRRQIVLPFSKSVEIAWRNLRARLFRSLITAGSLVLAVAFLSFVLVSTDIASGLARHGSAGTLRAL
YRAGFDVDTVTGAVQAGAKDRWIIILSLLVCTVGIVNAQMMSVTERFREIGIMKCLGALDSMILRLFLLEAVMQGVAGSA
AGAVAGLAAAISGGLARFGTDAVTLLPWSDVLLSLVQATGTGLILSLAAVLYPAIVAARMPPVAAMRADL
>Mature_229_residues
TPHDARKHTRPEEKRRQIVLPFSKSVEIAWRNLRARLFRSLITAGSLVLAVAFLSFVLVSTDIASGLARHGSAGTLRALY
RAGFDVDTVTGAVQAGAKDRWIIILSLLVCTVGIVNAQMMSVTERFREIGIMKCLGALDSMILRLFLLEAVMQGVAGSAA
GAVAGLAAAISGGLARFGTDAVTLLPWSDVLLSLVQATGTGLILSLAAVLYPAIVAARMPPVAAMRADL

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 24296; Mature: 24165

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPHDARKHTRPEEKRRQIVLPFSKSVEIAWRNLRARLFRSLITAGSLVLAVAFLSFVLV
CCCCCCHHCCCCHHHHCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STDIASGLARHGSAGTLRALYRAGFDVDTVTGAVQAGAKDRWIIILSLLVCTVGIVNAQM
HHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
MSVTERFREIGIMKCLGALDSMILRLFLLEAVMQGVAGSAAGAVAGLAAAISGGLARFGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
DAVTLLPWSDVLLSLVQATGTGLILSLAAVLYPAIVAARMPPVAAMRADL
CCEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure 
TPHDARKHTRPEEKRRQIVLPFSKSVEIAWRNLRARLFRSLITAGSLVLAVAFLSFVLV
CCCCCHHCCCCHHHHCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STDIASGLARHGSAGTLRALYRAGFDVDTVTGAVQAGAKDRWIIILSLLVCTVGIVNAQM
HHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
MSVTERFREIGIMKCLGALDSMILRLFLLEAVMQGVAGSAAGAVAGLAAAISGGLARFGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
DAVTLLPWSDVLLSLVQATGTGLILSLAAVLYPAIVAARMPPVAAMRADL
CCEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]