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The map label for this gene is ybhS [H]

Identifier: 78355745

GI number: 78355745

Start: 714020

End: 715150

Strand: Reverse

Name: ybhS [H]

Synonym: Dde_0698

Alternate gene names: 78355745

Gene position: 715150-714020 (Counterclockwise)

Preceding gene: 78355746

Following gene: 78355743

Centisome position: 19.17

GC content: 58.36

Gene sequence:

>1131_bases
ATGAACGGTCTGTCATTGCGGCGTTTTTTTGCCATTGTCGCCAAAGAATTCATCCAGATGCGGCGCGACCGCATGACACT
GGGCATGATGCTGGGCATTCCGCTGCTGCAGCTGGTGCTGTTCGGCTTTGCCATAAACTCCGACCCGCGCAATCTGCCCA
CGGCCGTACTGGCCGCAGACAATTCGCCGTTTGCCCGGTCGGTTGTCAGCGCCATGCAGACCAGCACCTACTTCCGCATC
ACCCGGCATGCCGCATCACGTCAGGAATTACGTCACCTGCTCGATTCCGGTCAGGTGCAGTTTGCCCTGACCATTCCCGA
AGACTTTTCACGCCGTCTGCTGCGCGGCGAAAAACCCGTTCTGCTGCTGGAGGCGGATGCCACTGATCCCATGGCTTCTG
GCGGCGGAACAGGGGCCTTTGCCGAAATTGTCCGCAGAGCGCTGCAACGCGACCTGCAGGGGCCGACCGGCATTCCCCGG
CAGGAACTGCCTGTGACCATCCGCATTCATGCCGACTACAACCCGGAAGCCGTCACCCAGTACAACATCGTCCCCGGACT
CATGGGGGTTATTCTTACCCTTACTCTGGTGGTCATCACCGCCGTGGCCATCACCCGCGAACGGGAAAGGGGCACCATGG
AATACCTGCTTTCAACGCCGGTCAGTCCGCCCGAAGTCATCATCGGAAAAATACTGCCGTACATTCTTGTGGGCTACGTG
CAGATGACACTTATCATCGCAGCCGCCCGATATGTGTTTGCAGTGCCCATAGCAGGCGACATCTGGCTGGTGTTTGCGCT
GGCCCTGCCGTTCATCGGCGCAAACCTGAGCATGGGTGTCACCTTCTCCACTTTTGCCCGCAACCAGCTTCAGGCGGTGC
AGCTCTCCATCTTTTTCTTCCTGCCCTCACTGCTGCTGTCGGGCTTCATGTTTCCGTTCCGCGGCATGCCGGAATGGGCA
CAGGCCATCGGTTCAGTTCTGCCGCTCACCCATTTTTTGCGAATCGTGCGCGGCATACTGCTTAAAGGCAACGGATTTGA
GGCTTCATGGCCTTCGCTGTGGCCCATACTCGTATTCTGGCTGGCTGCCGTGGTGCTGGCACTCAAAAGATACAGCAAAA
CACTGGACTGA

Upstream 100 bases:

>100_bases
TCATGCAGTCACACAGCCCCGACGTCCGGCACACCGGCACGGAAGAGCCGGACGGCGGAAAAAACGGCAGACATATACCG
CCGTACGGAGGGTCCGGCTC

Downstream 100 bases:

>100_bases
CCCGCTACACAGCCAGCCGGTACGCAGTGGCCGGTCCGGCTCCGCTTCTGGTCACCAGCCCCCGTTCGAACAGCCCCTGC
AGGTCTCTGCCTGCCGTGCG

Product: putative transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MNGLSLRRFFAIVAKEFIQMRRDRMTLGMMLGIPLLQLVLFGFAINSDPRNLPTAVLAADNSPFARSVVSAMQTSTYFRI
TRHAASRQELRHLLDSGQVQFALTIPEDFSRRLLRGEKPVLLLEADATDPMASGGGTGAFAEIVRRALQRDLQGPTGIPR
QELPVTIRIHADYNPEAVTQYNIVPGLMGVILTLTLVVITAVAITRERERGTMEYLLSTPVSPPEVIIGKILPYILVGYV
QMTLIIAAARYVFAVPIAGDIWLVFALALPFIGANLSMGVTFSTFARNQLQAVQLSIFFFLPSLLLSGFMFPFRGMPEWA
QAIGSVLPLTHFLRIVRGILLKGNGFEASWPSLWPILVFWLAAVVLALKRYSKTLD

Sequences:

>Translated_376_residues
MNGLSLRRFFAIVAKEFIQMRRDRMTLGMMLGIPLLQLVLFGFAINSDPRNLPTAVLAADNSPFARSVVSAMQTSTYFRI
TRHAASRQELRHLLDSGQVQFALTIPEDFSRRLLRGEKPVLLLEADATDPMASGGGTGAFAEIVRRALQRDLQGPTGIPR
QELPVTIRIHADYNPEAVTQYNIVPGLMGVILTLTLVVITAVAITRERERGTMEYLLSTPVSPPEVIIGKILPYILVGYV
QMTLIIAAARYVFAVPIAGDIWLVFALALPFIGANLSMGVTFSTFARNQLQAVQLSIFFFLPSLLLSGFMFPFRGMPEWA
QAIGSVLPLTHFLRIVRGILLKGNGFEASWPSLWPILVFWLAAVVLALKRYSKTLD
>Mature_376_residues
MNGLSLRRFFAIVAKEFIQMRRDRMTLGMMLGIPLLQLVLFGFAINSDPRNLPTAVLAADNSPFARSVVSAMQTSTYFRI
TRHAASRQELRHLLDSGQVQFALTIPEDFSRRLLRGEKPVLLLEADATDPMASGGGTGAFAEIVRRALQRDLQGPTGIPR
QELPVTIRIHADYNPEAVTQYNIVPGLMGVILTLTLVVITAVAITRERERGTMEYLLSTPVSPPEVIIGKILPYILVGYV
QMTLIIAAARYVFAVPIAGDIWLVFALALPFIGANLSMGVTFSTFARNQLQAVQLSIFFFLPSLLLSGFMFPFRGMPEWA
QAIGSVLPLTHFLRIVRGILLKGNGFEASWPSLWPILVFWLAAVVLALKRYSKTLD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=344, Percent_Identity=31.1046511627907, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1787010, Length=352, Percent_Identity=27.8409090909091, Blast_Score=163, Evalue=2e-41,
Organism=Escherichia coli, GI48994943, Length=361, Percent_Identity=29.3628808864266, Blast_Score=138, Evalue=5e-34,
Organism=Escherichia coli, GI226510979, Length=396, Percent_Identity=29.2929292929293, Blast_Score=125, Evalue=5e-30,
Organism=Drosophila melanogaster, GI85725260, Length=375, Percent_Identity=22.9333333333333, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24650855, Length=366, Percent_Identity=23.7704918032787, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24650853, Length=366, Percent_Identity=23.4972677595628, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI85725262, Length=375, Percent_Identity=22.9333333333333, Blast_Score=90, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41631; Mature: 41631

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGLSLRRFFAIVAKEFIQMRRDRMTLGMMLGIPLLQLVLFGFAINSDPRNLPTAVLAAD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
NSPFARSVVSAMQTSTYFRITRHAASRQELRHLLDSGQVQFALTIPEDFSRRLLRGEKPV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCE
LLLEADATDPMASGGGTGAFAEIVRRALQRDLQGPTGIPRQELPVTIRIHADYNPEAVTQ
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHEE
YNIVPGLMGVILTLTLVVITAVAITRERERGTMEYLLSTPVSPPEVIIGKILPYILVGYV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
QMTLIIAAARYVFAVPIAGDIWLVFALALPFIGANLSMGVTFSTFARNQLQAVQLSIFFF
HHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LPSLLLSGFMFPFRGMPEWAQAIGSVLPLTHFLRIVRGILLKGNGFEASWPSLWPILVFW
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
LAAVVLALKRYSKTLD
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNGLSLRRFFAIVAKEFIQMRRDRMTLGMMLGIPLLQLVLFGFAINSDPRNLPTAVLAAD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
NSPFARSVVSAMQTSTYFRITRHAASRQELRHLLDSGQVQFALTIPEDFSRRLLRGEKPV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCE
LLLEADATDPMASGGGTGAFAEIVRRALQRDLQGPTGIPRQELPVTIRIHADYNPEAVTQ
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHEE
YNIVPGLMGVILTLTLVVITAVAITRERERGTMEYLLSTPVSPPEVIIGKILPYILVGYV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
QMTLIIAAARYVFAVPIAGDIWLVFALALPFIGANLSMGVTFSTFARNQLQAVQLSIFFF
HHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LPSLLLSGFMFPFRGMPEWAQAIGSVLPLTHFLRIVRGILLKGNGFEASWPSLWPILVFW
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
LAAVVLALKRYSKTLD
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]