| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is zraS [H]
Identifier: 78355743
GI number: 78355743
Start: 709531
End: 711243
Strand: Reverse
Name: zraS [H]
Synonym: Dde_0696
Alternate gene names: 78355743
Gene position: 711243-709531 (Counterclockwise)
Preceding gene: 78355745
Following gene: 78355742
Centisome position: 19.07
GC content: 60.3
Gene sequence:
>1713_bases ATGCAGAAAACCAACGCAATGGGACACAAACTGGCTATCTGGGTTTCGGCCTTTGTGCTGCTGTTCGTCTCTCTGACGCT GGCGCTGACCTACACGCTGGTATCCCACGGTCTGGAAGCGGCCTACGCCAGACGCTCCAGCCAGTACCTTTCCAGTATTG TCCGGCAGCACTCCATACAGATCGACAGCTTTCTGCGCGAACGCAGGGCCAACCTCGCCTTTCTGGGCAAGTCGCGCACC GTGGACGAACTGCGTTCGCACGGTCATCTGGAGTGGCTGCTATGGCGGCTTAACGGACAGTACGAAAATGCCTTTGAGGA TCTGAGTCTTATCTCTCCGCAGGGAGAAGTGACCGCATACGCCGGACATGAGGGCCTGCTGGGCAGCAATGTATTTGAAG CCCGCTGGTTCCAGCGGGCCATAGCTAAGCCGTCCTATGTGGGCGACGTGGTTGCCATGCCGGACGGATCCCCCAAGCTG GTTGTTACACTGCGGCTGGGCAGCGCCAAGGAACCGTGGCTTATCAGCGCCACTCTGCGCATGCAGCTGATGGCCGATCT GGTCCGCTCCGCCGCGCAGTTCACCGAAGGCGACGTGGCCGTCATCAACCGCGCGGGCGTGCCGCAAAGCGGCCTGAACG CAAGTCAGGAACAGGGCCGCCCCGTCAGCGCCATGGCCGACAAGCTTTTTGCCATGCATGCCGCATCGGGCAGTGCAGTC ACCACCTACGAGCAGAACGGCGACCTGTATGCGTTTGCCGACCTGAATGAAGGCCGCTGGCTGCTTGTGTCGCGCACCCC CAATGCCGCCATACAACAGCCCTTTGCCGCTCCCAAAAAGCAGCTGCTCGACAAGCTGATACTGCTGGCGCTGCTGCTCA TCGGCGGGGCAGCCATGTTTGTGCACTATGTGACCCGCCAGACCAGACGGCTGGCCGCAGAAAAGGATTCGCTGAACACA CAGGTCATTGAAGCCAACAGGCTGGGCGCGCTGGGCGAACTGGCGGCGGGAGTGGCGCACGAAATCAACAACCCGCTGGC CATCATCCGCGAAGAAAGCGGCTGGATTGAAGACGTGCTGGATGACGGTTTTGATAATCCGGAAGCACTGGAAGGCGAAA TCCGCCGCAGTGTCACGCAGATAAATACCCAGACCCTGCGATGCAGAGACATCACCCACAAGCTGCTTTCGTTTGCGCGC CGCAGTACCGGCCATGAAGCCTGTGTCGATGTAAACATGCTGCTGCAGGAAATAGTGGGCTTTGCCGAACAGCGCGCCCG CTACATCAACGTGACCACGCGCATGCGGCTGGACCCCGCCCTGCCCATGCTCTCCGCCAGCCCTTCAGAACTGCAGCAGG TGTTCATCAATCTGGTGAACAACGCGCTGGACGCCATGGAAGACCGCCGCGACGGCACCCTGACCGTCACCTCGCGCCTG CAGGGAAACACGGCTGTCATCACCGTAAGCGACACAGGCCAGGGCATACCCGACACCCTGCTGAACAAGATATTCGACCC GTTCTTCACTACCAAGTCGGTGGGAAAGGGCAACGGTCTCGGTCTTTCCATCTGCCACGGCCTTGTGACCCGTGCAGGCG GAGATATCCGGGTCCAGAGCGAACTGCATAAGGGAACCACCTTCACCGTCGAGCTGCCCGTCACCCCATGCTCGGCAGAA CCAACAGGCAACGCAGACAGGAGTATCTCATGA
Upstream 100 bases:
>100_bases ATCAGCATATTAGAAAAACACATCAGGCCACAGGCACACCCCGTGCACAAGCAGCTGCATTCACGGTCACAACAACGCTG AAAAACAAGTGGACACTGCC
Downstream 100 bases:
>100_bases ACGTTTTACTGGTTGATGACGAAGTGGCCTTTGTGGAAGCCCTCGCACGGCGGCTGACCCGCAAGAACATGACCGTGCAC ACTGTGCACAACGGACCGGA
Product: periplasmic sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 570; Mature: 570
Protein sequence:
>570_residues MQKTNAMGHKLAIWVSAFVLLFVSLTLALTYTLVSHGLEAAYARRSSQYLSSIVRQHSIQIDSFLRERRANLAFLGKSRT VDELRSHGHLEWLLWRLNGQYENAFEDLSLISPQGEVTAYAGHEGLLGSNVFEARWFQRAIAKPSYVGDVVAMPDGSPKL VVTLRLGSAKEPWLISATLRMQLMADLVRSAAQFTEGDVAVINRAGVPQSGLNASQEQGRPVSAMADKLFAMHAASGSAV TTYEQNGDLYAFADLNEGRWLLVSRTPNAAIQQPFAAPKKQLLDKLILLALLLIGGAAMFVHYVTRQTRRLAAEKDSLNT QVIEANRLGALGELAAGVAHEINNPLAIIREESGWIEDVLDDGFDNPEALEGEIRRSVTQINTQTLRCRDITHKLLSFAR RSTGHEACVDVNMLLQEIVGFAEQRARYINVTTRMRLDPALPMLSASPSELQQVFINLVNNALDAMEDRRDGTLTVTSRL QGNTAVITVSDTGQGIPDTLLNKIFDPFFTTKSVGKGNGLGLSICHGLVTRAGGDIRVQSELHKGTTFTVELPVTPCSAE PTGNADRSIS
Sequences:
>Translated_570_residues MQKTNAMGHKLAIWVSAFVLLFVSLTLALTYTLVSHGLEAAYARRSSQYLSSIVRQHSIQIDSFLRERRANLAFLGKSRT VDELRSHGHLEWLLWRLNGQYENAFEDLSLISPQGEVTAYAGHEGLLGSNVFEARWFQRAIAKPSYVGDVVAMPDGSPKL VVTLRLGSAKEPWLISATLRMQLMADLVRSAAQFTEGDVAVINRAGVPQSGLNASQEQGRPVSAMADKLFAMHAASGSAV TTYEQNGDLYAFADLNEGRWLLVSRTPNAAIQQPFAAPKKQLLDKLILLALLLIGGAAMFVHYVTRQTRRLAAEKDSLNT QVIEANRLGALGELAAGVAHEINNPLAIIREESGWIEDVLDDGFDNPEALEGEIRRSVTQINTQTLRCRDITHKLLSFAR RSTGHEACVDVNMLLQEIVGFAEQRARYINVTTRMRLDPALPMLSASPSELQQVFINLVNNALDAMEDRRDGTLTVTSRL QGNTAVITVSDTGQGIPDTLLNKIFDPFFTTKSVGKGNGLGLSICHGLVTRAGGDIRVQSELHKGTTFTVELPVTPCSAE PTGNADRSIS >Mature_570_residues MQKTNAMGHKLAIWVSAFVLLFVSLTLALTYTLVSHGLEAAYARRSSQYLSSIVRQHSIQIDSFLRERRANLAFLGKSRT VDELRSHGHLEWLLWRLNGQYENAFEDLSLISPQGEVTAYAGHEGLLGSNVFEARWFQRAIAKPSYVGDVVAMPDGSPKL VVTLRLGSAKEPWLISATLRMQLMADLVRSAAQFTEGDVAVINRAGVPQSGLNASQEQGRPVSAMADKLFAMHAASGSAV TTYEQNGDLYAFADLNEGRWLLVSRTPNAAIQQPFAAPKKQLLDKLILLALLLIGGAAMFVHYVTRQTRRLAAEKDSLNT QVIEANRLGALGELAAGVAHEINNPLAIIREESGWIEDVLDDGFDNPEALEGEIRRSVTQINTQTLRCRDITHKLLSFAR RSTGHEACVDVNMLLQEIVGFAEQRARYINVTTRMRLDPALPMLSASPSELQQVFINLVNNALDAMEDRRDGTLTVTSRL QGNTAVITVSDTGQGIPDTLLNKIFDPFFTTKSVGKGNGLGLSICHGLVTRAGGDIRVQSELHKGTTFTVELPVTPCSAE PTGNADRSIS
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=318, Percent_Identity=31.1320754716981, Blast_Score=136, Evalue=3e-33, Organism=Escherichia coli, GI1788549, Length=269, Percent_Identity=32.7137546468402, Blast_Score=112, Evalue=7e-26, Organism=Escherichia coli, GI145693157, Length=230, Percent_Identity=30.4347826086957, Blast_Score=86, Evalue=8e-18, Organism=Escherichia coli, GI1790861, Length=318, Percent_Identity=25.4716981132075, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1790300, Length=256, Percent_Identity=30.078125, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI48994928, Length=141, Percent_Identity=35.4609929078014, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI87082128, Length=223, Percent_Identity=28.2511210762332, Blast_Score=70, Evalue=5e-13, Organism=Escherichia coli, GI1788393, Length=227, Percent_Identity=27.3127753303965, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI1786912, Length=224, Percent_Identity=25.8928571428571, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI87081816, Length=116, Percent_Identity=32.7586206896552, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 62330; Mature: 62330
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKTNAMGHKLAIWVSAFVLLFVSLTLALTYTLVSHGLEAAYARRSSQYLSSIVRQHSIQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH IDSFLRERRANLAFLGKSRTVDELRSHGHLEWLLWRLNGQYENAFEDLSLISPQGEVTAY HHHHHHHHCCCEEEECCCCCHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCCCCCCEEEE AGHEGLLGSNVFEARWFQRAIAKPSYVGDVVAMPDGSPKLVVTLRLGSAKEPWLISATLR CCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCEEEEEEEECCCCCCEEEHHHHH MQLMADLVRSAAQFTEGDVAVINRAGVPQSGLNASQEQGRPVSAMADKLFAMHAASGSAV HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCCEE TTYEQNGDLYAFADLNEGRWLLVSRTPNAAIQQPFAAPKKQLLDKLILLALLLIGGAAMF EEEECCCCEEEEEECCCCCEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH VHYVTRQTRRLAAEKDSLNTQVIEANRLGALGELAAGVAHEINNPLAIIREESGWIEDVL HHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHH DDGFDNPEALEGEIRRSVTQINTQTLRCRDITHKLLSFARRSTGHEACVDVNMLLQEIVG HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH FAEQRARYINVTTRMRLDPALPMLSASPSELQQVFINLVNNALDAMEDRRDGTLTVTSRL HHHHCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC QGNTAVITVSDTGQGIPDTLLNKIFDPFFTTKSVGKGNGLGLSICHGLVTRAGGDIRVQS CCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEE ELHKGTTFTVELPVTPCSAEPTGNADRSIS HHCCCCEEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQKTNAMGHKLAIWVSAFVLLFVSLTLALTYTLVSHGLEAAYARRSSQYLSSIVRQHSIQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH IDSFLRERRANLAFLGKSRTVDELRSHGHLEWLLWRLNGQYENAFEDLSLISPQGEVTAY HHHHHHHHCCCEEEECCCCCHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCCCCCCEEEE AGHEGLLGSNVFEARWFQRAIAKPSYVGDVVAMPDGSPKLVVTLRLGSAKEPWLISATLR CCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCEEEEEEEECCCCCCEEEHHHHH MQLMADLVRSAAQFTEGDVAVINRAGVPQSGLNASQEQGRPVSAMADKLFAMHAASGSAV HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCCEE TTYEQNGDLYAFADLNEGRWLLVSRTPNAAIQQPFAAPKKQLLDKLILLALLLIGGAAMF EEEECCCCEEEEEECCCCCEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH VHYVTRQTRRLAAEKDSLNTQVIEANRLGALGELAAGVAHEINNPLAIIREESGWIEDVL HHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHH DDGFDNPEALEGEIRRSVTQINTQTLRCRDITHKLLSFARRSTGHEACVDVNMLLQEIVG HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH FAEQRARYINVTTRMRLDPALPMLSASPSELQQVFINLVNNALDAMEDRRDGTLTVTSRL HHHHCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC QGNTAVITVSDTGQGIPDTLLNKIFDPFFTTKSVGKGNGLGLSICHGLVTRAGGDIRVQS CCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEE ELHKGTTFTVELPVTPCSAEPTGNADRSIS HHCCCCEEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 2666400; 11243806 [H]