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The map label for this gene is fdoI [C]

Identifier: 78355727

GI number: 78355727

Start: 696418

End: 697137

Strand: Reverse

Name: fdoI [C]

Synonym: Dde_0680

Alternate gene names: 78355727

Gene position: 697137-696418 (Counterclockwise)

Preceding gene: 78355728

Following gene: 78355726

Centisome position: 18.69

GC content: 60.28

Gene sequence:

>720_bases
ATGAACAGAACATACAAGCGCCATGACCGCTCCGACATAGCCATACACTGGTTCAACGCTCTGTGCTGGCTGCTGCTGCT
TGTCAGCGGGCTGGGGCTGATCAGCAACCCCGCTCTGAATCCGCTGGGAGAACGTCTGCCGGCGGCACTGCGCGCTTTTG
CCGGCGGCGGAGGCAACCTGCTGGTCTTTCACGAAGCCGTGGGAATAGGCTGGATAACTTCCTTTGTGCTGTACCTTGTA
CTCAACCCGCGCGGCGCACTTTTCTTTCTGAAAGAGATCTTCAGCGTGAGTCCTGCGCGGGACATGACGTGGATGCTGCG
CAAGATGGTGCTTATGACCGCAGGCGAAAAAGCCCTGCGCCGTCTCGGACAGCCTGCCGATCTGCCGCCTCAGGGCTTTT
ACAACATGGGGCAGAAAGGATTCGCGCAGGTGGCCGTCATCGGCGGGCTGGTCATCGCCGCCACCGGACTGGTGATGGTG
TTTTCCGACGCGGGACCGGTCACGCCGTCCGCAGCGCTTACAGGCTGGGCGGTAACGCTGCACTATCTTGCTGTGGGTGT
TGTTCTGGCAGGTCTGCTGGTGCACATATACATGGCGGCCATATCACCGGAAGAACGGCCGGGGTTCCGCTCCATGTTCA
CCGGCGTGGTGCCCGAAGATTATGCAAAGCATCACCACCGGCTGTGGTACGACCGCGTGGCCCGTCATACGCAGGAATAA

Upstream 100 bases:

>100_bases
CAGCAGTGCTTCCGGCAGCAATGCTTCCGGCAGCAATACATCCGGCACACAACACTCTGCGCCGGCAGACACCGAAGACA
GCAGGGAGTAGGAGGACGCC

Downstream 100 bases:

>100_bases
CCATCCGGCGGCGCAGGTAATGCCGCCTGCCGCCGGACACACAGTAACAGGAGAGAATCTGCAATGAAAACGATGCGCAA
ACCGTTGCTGACAACGCTGA

Product: formate dehydrogenase subunit gamma

Products: CO2; NADH2 [C]

Alternate protein names: Formate Dehydrogenase Subunit Gamma; Cytochrome B/B6 Domain-Containing Protein; Formate Dehydrogenase Cytochrome

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MNRTYKRHDRSDIAIHWFNALCWLLLLVSGLGLISNPALNPLGERLPAALRAFAGGGGNLLVFHEAVGIGWITSFVLYLV
LNPRGALFFLKEIFSVSPARDMTWMLRKMVLMTAGEKALRRLGQPADLPPQGFYNMGQKGFAQVAVIGGLVIAATGLVMV
FSDAGPVTPSAALTGWAVTLHYLAVGVVLAGLLVHIYMAAISPEERPGFRSMFTGVVPEDYAKHHHRLWYDRVARHTQE

Sequences:

>Translated_239_residues
MNRTYKRHDRSDIAIHWFNALCWLLLLVSGLGLISNPALNPLGERLPAALRAFAGGGGNLLVFHEAVGIGWITSFVLYLV
LNPRGALFFLKEIFSVSPARDMTWMLRKMVLMTAGEKALRRLGQPADLPPQGFYNMGQKGFAQVAVIGGLVIAATGLVMV
FSDAGPVTPSAALTGWAVTLHYLAVGVVLAGLLVHIYMAAISPEERPGFRSMFTGVVPEDYAKHHHRLWYDRVARHTQE
>Mature_239_residues
MNRTYKRHDRSDIAIHWFNALCWLLLLVSGLGLISNPALNPLGERLPAALRAFAGGGGNLLVFHEAVGIGWITSFVLYLV
LNPRGALFFLKEIFSVSPARDMTWMLRKMVLMTAGEKALRRLGQPADLPPQGFYNMGQKGFAQVAVIGGLVIAATGLVMV
FSDAGPVTPSAALTGWAVTLHYLAVGVVLAGLLVHIYMAAISPEERPGFRSMFTGVVPEDYAKHHHRLWYDRVARHTQE

Specific function: Allows To Use Formate As Major Electron Donor During Aerobic Respiration. Subunit Gamma Is Probably The Cytochrome B556(Fdo) Component Of The Formate Dehydrogenase. [C]

COG id: COG2864

COG function: function code C; Cytochrome b subunit of formate dehydrogenase

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26219; Mature: 26219

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRTYKRHDRSDIAIHWFNALCWLLLLVSGLGLISNPALNPLGERLPAALRAFAGGGGNL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHCCCCCCE
LVFHEAVGIGWITSFVLYLVLNPRGALFFLKEIFSVSPARDMTWMLRKMVLMTAGEKALR
EEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHH
RLGQPADLPPQGFYNMGQKGFAQVAVIGGLVIAATGLVMVFSDAGPVTPSAALTGWAVTL
HCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHH
HYLAVGVVLAGLLVHIYMAAISPEERPGFRSMFTGVVPEDYAKHHHRLWYDRVARHTQE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNRTYKRHDRSDIAIHWFNALCWLLLLVSGLGLISNPALNPLGERLPAALRAFAGGGGNL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHCCCCCCE
LVFHEAVGIGWITSFVLYLVLNPRGALFFLKEIFSVSPARDMTWMLRKMVLMTAGEKALR
EEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHH
RLGQPADLPPQGFYNMGQKGFAQVAVIGGLVIAATGLVMVFSDAGPVTPSAALTGWAVTL
HCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHH
HYLAVGVVLAGLLVHIYMAAISPEERPGFRSMFTGVVPEDYAKHHHRLWYDRVARHTQE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate; NAD [C]

Specific reaction: formate + NAD = CO2 + NADH2 [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA