| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355726
Identifier: 78355726
GI number: 78355726
Start: 695263
End: 696354
Strand: Reverse
Name: 78355726
Synonym: Dde_0679
Alternate gene names: NA
Gene position: 696354-695263 (Counterclockwise)
Preceding gene: 78355727
Following gene: 78355725
Centisome position: 18.67
GC content: 57.23
Gene sequence:
>1092_bases ATGAAAACGATGCGCAAACCGTTGCTGACAACGCTGATGCTCATGCTGGGGCTTATGCTGCTTTCCGGATGTGCGGCACA GCAGCCCCGCGAACCGTGGATGATAAATGACATCGTTGATGTGGAGTACGTGGCGCAGTACGTCAAGGTACCCCATCCCG AAAATGTCATGATCATCGATTCGCGCCCGTACGAGGCAAAGTTCGTCAAAGGATACATTCCCACTGCCGTCAGCATTCCC GACACGCAGTTTGAAAAACATGCCGACAGGCTGCCGGCCGATAAAAATGCTCTGCTTATTTTCTACTGCGGCGGCTGGCA GTGCAAGCTCTCGCACAAATCCGCCCGTAAAGCCATGGATATGGGCTACACCAATGTAAAGGTGTTTGCCGCCGGATACC CCGCATGGCTGGAAAGCGGCCGCGTACCGGCGCTGGGGCTTGAAGCGCTGCACGACATGCTTGCTTCCGGCGCGGACTAT ATGCTCATAGATTCCCGCCCCGTGCAGAAGTATCTCGAAGGCACCATCCCTTCGGCCATATCTGTGCCGGACAGCAGGTT TGACGCCAAGAAGGGACTGCTGCCCGCCGATAAAAACACGCCGCTCATATTCTTCTGCGGCGGACTCAAGTGTCCTCTCA GCCACAAGTCGGCGGCTAAGGCGCAGGCACTGGGCTACACCAGCGTGTGGATAGCCGAAGAAGGCGAACCCGGCTGGAAA GCCCTTTACGGCGGCGGACAGGCCGTAGCCGTCCAGTCCGGCGGAGAAGAAGGCTCCATCGACGCGGAGCAGTTTAAAAC CATCATGGCGGAGTCTCCCGGCAGCATCATGGTGGTGGATGTGCGCGACCCGGACGAGTTCAATGCGGGCCATATGAAAG GAGCCGTCAACATCCCTGTGGACAGGCTTGAAAAAGAAATAGCCGCCCTGCCCGCAGATAAGCCCGTGGTCTTTGTATGC GCCACAGGCGCCCGCAGCGGCGAAGCCTACTACATGACCCGCGACCTGCGGCCGGAAATAAAAGACGTCTTCTATCTTGA AGCCGAAACCACCTATCATAAGGATGGCAGCTTCGACATAACGGTACCCTAA
Upstream 100 bases:
>100_bases GTGGTACGACCGCGTGGCCCGTCATACGCAGGAATAACCATCCGGCGGCGCAGGTAATGCCGCCTGCCGCCGGACACACA GTAACAGGAGAGAATCTGCA
Downstream 100 bases:
>100_bases CCTCATGCCGCGCGGCGGGAATGCATTCCCGCCGCGCGCACCGTGCCGGAGGCAGCATGTCCGTAATCCGGTCTTTCCCC TTCTGCCGCACATCCATGCG
Product: rhodanese-like protein
Products: NA
Alternate protein names: Rhodanese Domain-Containing Protein; Rhodanese-Like Protein; Rhodanese-Like Domain-Containing Protein; Sulfur Transferase Selenocysteine-Containing Protein; Sulfur Transferase Selenocysteine-Containing; Sulfur Transferase; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; Rhodanese-Like Sulfur Transferase
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MKTMRKPLLTTLMLMLGLMLLSGCAAQQPREPWMINDIVDVEYVAQYVKVPHPENVMIIDSRPYEAKFVKGYIPTAVSIP DTQFEKHADRLPADKNALLIFYCGGWQCKLSHKSARKAMDMGYTNVKVFAAGYPAWLESGRVPALGLEALHDMLASGADY MLIDSRPVQKYLEGTIPSAISVPDSRFDAKKGLLPADKNTPLIFFCGGLKCPLSHKSAAKAQALGYTSVWIAEEGEPGWK ALYGGGQAVAVQSGGEEGSIDAEQFKTIMAESPGSIMVVDVRDPDEFNAGHMKGAVNIPVDRLEKEIAALPADKPVVFVC ATGARSGEAYYMTRDLRPEIKDVFYLEAETTYHKDGSFDITVP
Sequences:
>Translated_363_residues MKTMRKPLLTTLMLMLGLMLLSGCAAQQPREPWMINDIVDVEYVAQYVKVPHPENVMIIDSRPYEAKFVKGYIPTAVSIP DTQFEKHADRLPADKNALLIFYCGGWQCKLSHKSARKAMDMGYTNVKVFAAGYPAWLESGRVPALGLEALHDMLASGADY MLIDSRPVQKYLEGTIPSAISVPDSRFDAKKGLLPADKNTPLIFFCGGLKCPLSHKSAAKAQALGYTSVWIAEEGEPGWK ALYGGGQAVAVQSGGEEGSIDAEQFKTIMAESPGSIMVVDVRDPDEFNAGHMKGAVNIPVDRLEKEIAALPADKPVVFVC ATGARSGEAYYMTRDLRPEIKDVFYLEAETTYHKDGSFDITVP >Mature_363_residues MKTMRKPLLTTLMLMLGLMLLSGCAAQQPREPWMINDIVDVEYVAQYVKVPHPENVMIIDSRPYEAKFVKGYIPTAVSIP DTQFEKHADRLPADKNALLIFYCGGWQCKLSHKSARKAMDMGYTNVKVFAAGYPAWLESGRVPALGLEALHDMLASGADY MLIDSRPVQKYLEGTIPSAISVPDSRFDAKKGLLPADKNTPLIFFCGGLKCPLSHKSAAKAQALGYTSVWIAEEGEPGWK ALYGGGQAVAVQSGGEEGSIDAEQFKTIMAESPGSIMVVDVRDPDEFNAGHMKGAVNIPVDRLEKEIAALPADKPVVFVC ATGARSGEAYYMTRDLRPEIKDVFYLEAETTYHKDGSFDITVP
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39747; Mature: 39747
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTMRKPLLTTLMLMLGLMLLSGCAAQQPREPWMINDIVDVEYVAQYVKVPHPENVMIID CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCEEEEE SRPYEAKFVKGYIPTAVSIPDTQFEKHADRLPADKNALLIFYCGGWQCKLSHKSARKAMD CCCCCCEEEECCCCCEEECCCHHHHHHHHHCCCCCCEEEEEEECCEEEEECHHHHHHHHH MGYTNVKVFAAGYPAWLESGRVPALGLEALHDMLASGADYMLIDSRPVQKYLEGTIPSAI CCCCEEEEEECCCHHHHHCCCCCEECHHHHHHHHHCCCCEEEECCCHHHHHHCCCCCCEE SVPDSRFDAKKGLLPADKNTPLIFFCGGLKCPLSHKSAAKAQALGYTSVWIAEEGEPGWK CCCCCHHHHHCCCCCCCCCCCEEEEECCEECCCCCCCHHHHHHCCCEEEEEEECCCCCCE ALYGGGQAVAVQSGGEEGSIDAEQFKTIMAESPGSIMVVDVRDPDEFNAGHMKGAVNIPV EEECCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEECCH DRLEKEIAALPADKPVVFVCATGARSGEAYYMTRDLRPEIKDVFYLEAETTYHKDGSFDI HHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCEEEEEEECCEEECCCCEEE TVP ECC >Mature Secondary Structure MKTMRKPLLTTLMLMLGLMLLSGCAAQQPREPWMINDIVDVEYVAQYVKVPHPENVMIID CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCEEEEE SRPYEAKFVKGYIPTAVSIPDTQFEKHADRLPADKNALLIFYCGGWQCKLSHKSARKAMD CCCCCCEEEECCCCCEEECCCHHHHHHHHHCCCCCCEEEEEEECCEEEEECHHHHHHHHH MGYTNVKVFAAGYPAWLESGRVPALGLEALHDMLASGADYMLIDSRPVQKYLEGTIPSAI CCCCEEEEEECCCHHHHHCCCCCEECHHHHHHHHHCCCCEEEECCCHHHHHHCCCCCCEE SVPDSRFDAKKGLLPADKNTPLIFFCGGLKCPLSHKSAAKAQALGYTSVWIAEEGEPGWK CCCCCHHHHHCCCCCCCCCCCEEEEECCEECCCCCCCHHHHHHCCCEEEEEEECCCCCCE ALYGGGQAVAVQSGGEEGSIDAEQFKTIMAESPGSIMVVDVRDPDEFNAGHMKGAVNIPV EEECCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEECCH DRLEKEIAALPADKPVVFVCATGARSGEAYYMTRDLRPEIKDVFYLEAETTYHKDGSFDI HHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCEEEEEEECCEEECCCCEEE TVP ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA