| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355641
Identifier: 78355641
GI number: 78355641
Start: 617570
End: 619630
Strand: Reverse
Name: 78355641
Synonym: Dde_0594
Alternate gene names: NA
Gene position: 619630-617570 (Counterclockwise)
Preceding gene: 78355642
Following gene: 78355635
Centisome position: 16.61
GC content: 60.5
Gene sequence:
>2061_bases ATGACTACCGCAACAACAACCGATACAGCCCGACAGGGACAGGTTCTGCTCCGGCGGCCCGAAGCGGGCCGGCAGACGGA ACTGACGACCGGAGCTCAGGCCATTATGCTGGGCTTCAATCTGGATGAAGCAACGCTGGTGCAGGATAGCGGCGATCTGA TTTTCCAGTTTGCCGACGGCGGCACCATTACGCTGGAAGGCTTTGTCGATGGCCTTGCAGCGGGTGAAGCTCCGCAATTG ACACTTGCCGACGGCACCGTGCTGGACGGTCAGGCGTTTTTCCAGATGCAGGGACTTGAAATTGAAACAGCCGCCGGTCC CGGCGCAGCAAGCGGCGGGTCGGGGGAATACTCCGACGATCCCGGCCTGCTGTACGACGGCATCGATCCGCTTGACCCCA TCGGTAACGTCAACTTTGTCAATCCGTTGCCCGAAGGCCCGCTGGACGAGGAAGGTCTGGACCCCGACGACGGCGGAACG GGCGCAGGCGGCACGCCGTCCACACTTATTGTGGGCAGCAACGAAGGTGACAACCTGACCGGCACACAACCGCACACCGA CCGCGTGGACGACGGCACGCAAGTGCCGGTGGACAGCGGAACCATTACCGGCACCGGTGGCAATGATGTGCTGGTGGGTG ATGCGCAGGGTCAGCTGGAAAACGCCAACGTGCTTGTTGTCATCGACATGTCGTACAGCATGTCCGAATCCATATCAGAC GGAAACGGAGGCACGCAGGCGCGCTACGAAGCGGCGGCAAAGGCGCTGAGCGACTTCATCAGCAAATACGCAGGCCACGA CAACATAAACCTTGCCGTGACCACGTTCGGCTACACCACGCTTACCGGACCGGTAACTATCGACCTGACCAACCCCGATA TGGCCACCGTCATAAGCAACGCGCTGCATGCACTGGGGATTGACCAGCCGCCTGTGAACCCGCAGGGAACCAACTTCGAC GCCGCCATGGAAACCGGCAGAGAATGGTTCGATGCCGCCAATCAGGACCCCGGTCATGCCGGTTACAAAAATGTAGCCAT CTTTGTAACCGACGGCGCCCCCACGGTGCACAATGATCCGGGCAGCACCGACGGGTACGACAAAGGCTCCAGCCTGAACG GCAAGGTAATGGACCAGAACGACTTTGACCCCGCGCTGGACGGATACAACGCACTTATCGGCGCATCATGGGGCGTGGAG GTCCATACCTTCGGTCTCGGACAGGCTGACACCATAATACGCACCCGTCCCAGCGAGGATATCAACCCCGCAGGTGACGA GACCGCAGGCTGGGTGGCCGATCAGTTCGACAACACCGGCGGATCGGAATTTGTCAACACCACCCCCGATCTGTCGCATG CCATGCAGAATGTCCATCAGCAGCTCGGCGACGACCTGCTGACCGGCGGCGACGGCAACGACATCATGTTCGGCGATGTG CTGAACACCGACGGCATCACTTCCATCAGCGGCAACGCAAGCATAGACGCCCACCCCGACGGACAGGGCTGGGCTGTCAT GCAGAAGCTGGTCGCTGCCGGTGAATCGTGGGAAAACATCGTCGACTATATCCGCGACAACCACGAAGCTCTTGCTTCCG GTTCGCGCTACGGCGGCGACGACACCCTTGACGGCGGAGCCGGAGATGACATCATGTACGGCCAGAGCGGCAATGATGTG CTGCTGGGCGGCGCCGGAAACGACATTCTGGTGGGCGGACCGGGCAACGATACGCTTGAGGGCGGAACCGGTGCCGACAC CTTCATGTGGCATAACGGCGATCAGGGCACAGTTACCACGCCTGCACACGACCACATCATGGACTACGACACCACACAGG GTGACAGCCTTGATCTGCGCGACCTGCTCTCCGGCGTGTCTTCGGACAGCAACCTGCACGACAACATCACCATAAGCAGC GACGGCACAGACACCACCATCAGCATACACGCCGACGGTGCTCCCGCACAGGTGGTGCAGGAAATCACCCTGCACGGAGT GGATGCCACATCCATGACCGATCAGCTGAACGAACTGAACATCATTCTGGGAACCCCGTAA
Upstream 100 bases:
>100_bases GGTACATACCCCGCGGCACGGGCTGCCCACGGCAGTCCGCACGCCGGAAACACGGCCAGTATCACCCGCAGCAAAATGCT GCCGGGGGGAGGGATAAGCC
Downstream 100 bases:
>100_bases CAGCAACGGGGGCAAAAAAACACCAAAGGGCGCCGCAAAGGCGCCCTTTTTCATTCATATCCTCCGCCGCTCCCGCAGTC AGCGGGCCGCCTGACGGACA
Product: von Willebrand factor, type A
Products: NA
Alternate protein names: Outer Membrane Adhesin Like Proteiin; Von Willebrand Factor Type A; Hemagglutinin/Hemolysin-Related Protein; RTX xin; Von Willebrand Factor
Number of amino acids: Translated: 686; Mature: 685
Protein sequence:
>686_residues MTTATTTDTARQGQVLLRRPEAGRQTELTTGAQAIMLGFNLDEATLVQDSGDLIFQFADGGTITLEGFVDGLAAGEAPQL TLADGTVLDGQAFFQMQGLEIETAAGPGAASGGSGEYSDDPGLLYDGIDPLDPIGNVNFVNPLPEGPLDEEGLDPDDGGT GAGGTPSTLIVGSNEGDNLTGTQPHTDRVDDGTQVPVDSGTITGTGGNDVLVGDAQGQLENANVLVVIDMSYSMSESISD GNGGTQARYEAAAKALSDFISKYAGHDNINLAVTTFGYTTLTGPVTIDLTNPDMATVISNALHALGIDQPPVNPQGTNFD AAMETGREWFDAANQDPGHAGYKNVAIFVTDGAPTVHNDPGSTDGYDKGSSLNGKVMDQNDFDPALDGYNALIGASWGVE VHTFGLGQADTIIRTRPSEDINPAGDETAGWVADQFDNTGGSEFVNTTPDLSHAMQNVHQQLGDDLLTGGDGNDIMFGDV LNTDGITSISGNASIDAHPDGQGWAVMQKLVAAGESWENIVDYIRDNHEALASGSRYGGDDTLDGGAGDDIMYGQSGNDV LLGGAGNDILVGGPGNDTLEGGTGADTFMWHNGDQGTVTTPAHDHIMDYDTTQGDSLDLRDLLSGVSSDSNLHDNITISS DGTDTTISIHADGAPAQVVQEITLHGVDATSMTDQLNELNIILGTP
Sequences:
>Translated_686_residues MTTATTTDTARQGQVLLRRPEAGRQTELTTGAQAIMLGFNLDEATLVQDSGDLIFQFADGGTITLEGFVDGLAAGEAPQL TLADGTVLDGQAFFQMQGLEIETAAGPGAASGGSGEYSDDPGLLYDGIDPLDPIGNVNFVNPLPEGPLDEEGLDPDDGGT GAGGTPSTLIVGSNEGDNLTGTQPHTDRVDDGTQVPVDSGTITGTGGNDVLVGDAQGQLENANVLVVIDMSYSMSESISD GNGGTQARYEAAAKALSDFISKYAGHDNINLAVTTFGYTTLTGPVTIDLTNPDMATVISNALHALGIDQPPVNPQGTNFD AAMETGREWFDAANQDPGHAGYKNVAIFVTDGAPTVHNDPGSTDGYDKGSSLNGKVMDQNDFDPALDGYNALIGASWGVE VHTFGLGQADTIIRTRPSEDINPAGDETAGWVADQFDNTGGSEFVNTTPDLSHAMQNVHQQLGDDLLTGGDGNDIMFGDV LNTDGITSISGNASIDAHPDGQGWAVMQKLVAAGESWENIVDYIRDNHEALASGSRYGGDDTLDGGAGDDIMYGQSGNDV LLGGAGNDILVGGPGNDTLEGGTGADTFMWHNGDQGTVTTPAHDHIMDYDTTQGDSLDLRDLLSGVSSDSNLHDNITISS DGTDTTISIHADGAPAQVVQEITLHGVDATSMTDQLNELNIILGTP >Mature_685_residues TTATTTDTARQGQVLLRRPEAGRQTELTTGAQAIMLGFNLDEATLVQDSGDLIFQFADGGTITLEGFVDGLAAGEAPQLT LADGTVLDGQAFFQMQGLEIETAAGPGAASGGSGEYSDDPGLLYDGIDPLDPIGNVNFVNPLPEGPLDEEGLDPDDGGTG AGGTPSTLIVGSNEGDNLTGTQPHTDRVDDGTQVPVDSGTITGTGGNDVLVGDAQGQLENANVLVVIDMSYSMSESISDG NGGTQARYEAAAKALSDFISKYAGHDNINLAVTTFGYTTLTGPVTIDLTNPDMATVISNALHALGIDQPPVNPQGTNFDA AMETGREWFDAANQDPGHAGYKNVAIFVTDGAPTVHNDPGSTDGYDKGSSLNGKVMDQNDFDPALDGYNALIGASWGVEV HTFGLGQADTIIRTRPSEDINPAGDETAGWVADQFDNTGGSEFVNTTPDLSHAMQNVHQQLGDDLLTGGDGNDIMFGDVL NTDGITSISGNASIDAHPDGQGWAVMQKLVAAGESWENIVDYIRDNHEALASGSRYGGDDTLDGGAGDDIMYGQSGNDVL LGGAGNDILVGGPGNDTLEGGTGADTFMWHNGDQGTVTTPAHDHIMDYDTTQGDSLDLRDLLSGVSSDSNLHDNITISSD GTDTTISIHADGAPAQVVQEITLHGVDATSMTDQLNELNIILGTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70914; Mature: 70783
Theoretical pI: Translated: 3.62; Mature: 3.62
Prosite motif: PS50234 VWFA ; PS00330 HEMOLYSIN_CALCIUM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTATTTDTARQGQVLLRRPEAGRQTELTTGAQAIMLGFNLDEATLVQDSGDLIFQFADG CCCCCCCCCCCCCCEEEECCCCCCCCEECCCCEEEEEECCCCCEEEEECCCCEEEEEECC GTITLEGFVDGLAAGEAPQLTLADGTVLDGQAFFQMQGLEIETAAGPGAASGGSGEYSDD CEEEEEEHHHHHHCCCCCEEEECCCEEECCCEEEEEECEEEEECCCCCCCCCCCCCCCCC PGLLYDGIDPLDPIGNVNFVNPLPEGPLDEEGLDPDDGGTGAGGTPSTLIVGSNEGDNLT CCEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC GTQPHTDRVDDGTQVPVDSGTITGTGGNDVLVGDAQGQLENANVLVVIDMSYSMSESISD CCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCC GNGGTQARYEAAAKALSDFISKYAGHDNINLAVTTFGYTTLTGPVTIDLTNPDMATVISN CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEECCCEEEEECCCHHHHHHHH ALHALGIDQPPVNPQGTNFDAAMETGREWFDAANQDPGHAGYKNVAIFVTDGAPTVHNDP HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCC GSTDGYDKGSSLNGKVMDQNDFDPALDGYNALIGASWGVEVHTFGLGQADTIIRTRPSED CCCCCCCCCCCCCCEEECCCCCCCHHCCCCEEEECCCCCEEEEECCCCCCEEEEECCCCC INPAGDETAGWVADQFDNTGGSEFVNTTPDLSHAMQNVHQQLGDDLLTGGDGNDIMFGDV CCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCEEEEEEE LNTDGITSISGNASIDAHPDGQGWAVMQKLVAAGESWENIVDYIRDNHEALASGSRYGGD ECCCCCEEECCCCEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCCCCCCCC DTLDGGAGDDIMYGQSGNDVLLGGAGNDILVGGPGNDTLEGGTGADTFMWHNGDQGTVTT CCCCCCCCCCEEECCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEC PAHDHIMDYDTTQGDSLDLRDLLSGVSSDSNLHDNITISSDGTDTTISIHADGAPAQVVQ CCHHCEECCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEECCCHHHHHH EITLHGVDATSMTDQLNELNIILGTP HHHHCCCCHHHHHHHHCCEEEEEECC >Mature Secondary Structure TTATTTDTARQGQVLLRRPEAGRQTELTTGAQAIMLGFNLDEATLVQDSGDLIFQFADG CCCCCCCCCCCCCEEEECCCCCCCCEECCCCEEEEEECCCCCEEEEECCCCEEEEEECC GTITLEGFVDGLAAGEAPQLTLADGTVLDGQAFFQMQGLEIETAAGPGAASGGSGEYSDD CEEEEEEHHHHHHCCCCCEEEECCCEEECCCEEEEEECEEEEECCCCCCCCCCCCCCCCC PGLLYDGIDPLDPIGNVNFVNPLPEGPLDEEGLDPDDGGTGAGGTPSTLIVGSNEGDNLT CCEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC GTQPHTDRVDDGTQVPVDSGTITGTGGNDVLVGDAQGQLENANVLVVIDMSYSMSESISD CCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCC GNGGTQARYEAAAKALSDFISKYAGHDNINLAVTTFGYTTLTGPVTIDLTNPDMATVISN CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEECCCEEEEECCCHHHHHHHH ALHALGIDQPPVNPQGTNFDAAMETGREWFDAANQDPGHAGYKNVAIFVTDGAPTVHNDP HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCC GSTDGYDKGSSLNGKVMDQNDFDPALDGYNALIGASWGVEVHTFGLGQADTIIRTRPSED CCCCCCCCCCCCCCEEECCCCCCCHHCCCCEEEECCCCCEEEEECCCCCCEEEEECCCCC INPAGDETAGWVADQFDNTGGSEFVNTTPDLSHAMQNVHQQLGDDLLTGGDGNDIMFGDV CCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCEEEEEEE LNTDGITSISGNASIDAHPDGQGWAVMQKLVAAGESWENIVDYIRDNHEALASGSRYGGD ECCCCCEEECCCCEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCCCCCCCC DTLDGGAGDDIMYGQSGNDVLLGGAGNDILVGGPGNDTLEGGTGADTFMWHNGDQGTVTT CCCCCCCCCCEEECCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEC PAHDHIMDYDTTQGDSLDLRDLLSGVSSDSNLHDNITISSDGTDTTISIHADGAPAQVVQ CCHHCEECCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEECCCHHHHHH EITLHGVDATSMTDQLNELNIILGTP HHHHCCCCHHHHHHHHCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA