Click here to switch to the map view.

The map label for this gene is lemA [H]

Identifier: 78355624

GI number: 78355624

Start: 603389

End: 603943

Strand: Reverse

Name: lemA [H]

Synonym: Dde_0577

Alternate gene names: 78355624

Gene position: 603943-603389 (Counterclockwise)

Preceding gene: 78355635

Following gene: 78355623

Centisome position: 16.19

GC content: 56.4

Gene sequence:

>555_bases
ATGTATATTTTCATAGCAACGGCGGCACCCGCAGCATTGATCGTGCTGTGGGGCATCATGCTGTACAACCGTTTTGTCCG
CTTCCGGGCCATGATTGAAGAAGCCTGGAGCGGTATCGACGTTCATCTGAAGCAGCGTCACGATCTTGTGCCCAACCTTG
TCGCCACTGTGCGCGGATATGCAGACCACGAAAATCAGACCCTGACGGCTGTCACTGAAGCGAGAAGCCGCTGCATGACA
GCGGGCGGACCGCAGGAGGCGGCAGTGGCGGAAAGCTTTCTGGGTCAGGCGCTTGGCAATCTGTTCGCCCTCTCGGAAAG
CTACCCCCAACTGAAGGCCGATGCCGGATTCAGACAGCTGCAGGAACAGCTTGCCTCTCTGGAAGACAACATCCAGAACG
CCCGCCGCTACTACAACGGCACAGTACGCCAGATGAATGTGGCCGTAGACAGTTTCCCGTCAAATATCATAGCCGGAATA
TTCAAGTTTTCCCGCGCAGACTATTTTGAACTGGAAGACGCCGCCCAGCGTGCTGTCCCCGCCGTGCAGTTTTAG

Upstream 100 bases:

>100_bases
TCTGCGCCGATGCGCCGCACCGCAGCCTCTTTGCGGTACTGCACATCACCCGCACTGCGCGGCAGCAGCAACAGCATCTG
ATTACCTTGGAGCAAACACG

Downstream 100 bases:

>100_bases
CACGGGGCACTGCCCCGCCGCTGATACCGGCCCTGTGCAGCCGTACGCACCTGAAAACCGGCCGCAACGCGTTGCGGCCT
TTACGACGCCCCTTGCTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MYIFIATAAPAALIVLWGIMLYNRFVRFRAMIEEAWSGIDVHLKQRHDLVPNLVATVRGYADHENQTLTAVTEARSRCMT
AGGPQEAAVAESFLGQALGNLFALSESYPQLKADAGFRQLQEQLASLEDNIQNARRYYNGTVRQMNVAVDSFPSNIIAGI
FKFSRADYFELEDAAQRAVPAVQF

Sequences:

>Translated_184_residues
MYIFIATAAPAALIVLWGIMLYNRFVRFRAMIEEAWSGIDVHLKQRHDLVPNLVATVRGYADHENQTLTAVTEARSRCMT
AGGPQEAAVAESFLGQALGNLFALSESYPQLKADAGFRQLQEQLASLEDNIQNARRYYNGTVRQMNVAVDSFPSNIIAGI
FKFSRADYFELEDAAQRAVPAVQF
>Mature_184_residues
MYIFIATAAPAALIVLWGIMLYNRFVRFRAMIEEAWSGIDVHLKQRHDLVPNLVATVRGYADHENQTLTAVTEARSRCMT
AGGPQEAAVAESFLGQALGNLFALSESYPQLKADAGFRQLQEQLASLEDNIQNARRYYNGTVRQMNVAVDSFPSNIIAGI
FKFSRADYFELEDAAQRAVPAVQF

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 20509; Mature: 20509

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIFIATAAPAALIVLWGIMLYNRFVRFRAMIEEAWSGIDVHLKQRHDLVPNLVATVRGY
CEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCC
ADHENQTLTAVTEARSRCMTAGGPQEAAVAESFLGQALGNLFALSESYPQLKADAGFRQL
CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHH
QEQLASLEDNIQNARRYYNGTVRQMNVAVDSFPSNIIAGIFKFSRADYFELEDAAQRAVP
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
AVQF
CCCC
>Mature Secondary Structure
MYIFIATAAPAALIVLWGIMLYNRFVRFRAMIEEAWSGIDVHLKQRHDLVPNLVATVRGY
CEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCC
ADHENQTLTAVTEARSRCMTAGGPQEAAVAESFLGQALGNLFALSESYPQLKADAGFRQL
CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHH
QEQLASLEDNIQNARRYYNGTVRQMNVAVDSFPSNIIAGIFKFSRADYFELEDAAQRAVP
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
AVQF
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]