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The map label for this gene is yciQ [H]

Identifier: 78355623

GI number: 78355623

Start: 601317

End: 603275

Strand: Reverse

Name: yciQ [H]

Synonym: Dde_0576

Alternate gene names: 78355623

Gene position: 603275-601317 (Counterclockwise)

Preceding gene: 78355624

Following gene: 78355622

Centisome position: 16.17

GC content: 60.95

Gene sequence:

>1959_bases
ATGTCCCACACCCTGCAAAAGCGGACAGCGCTGCTTGCCGCCTGTCTGGCCGCCGTGCCGCTGCTCTGCGCTCTGCTGCT
GTCTTCTCCCGTTCCCGCCTGCGCAGCCCGGCAGGCCCCTGCGGCAGAACGCATTCTGCTGTTTGATTCCACCGTGCACA
TTCAGCCCGACGGGCTGTTGTCCGAGCGTGAGACCATCAGGGTCAACGTTCTGGGCCAAAACATCCGGCGCGGCATTTTC
CGCGATATTCCGGTGCGCTACAAGCTCGGCATGGGGTTACGCCGCCGTCATGCGCTCATTGTGCAGAACGTGCTGCGCAA
CGGAAAACCGGAACCCTATGCCGTGGAACAGCGCAATCATGTACTGCGCATACTCATCGGCTCGGGGCATGCCATGCTGG
ACCACGGGGTGCACACCTATGAGATAACCTACACGCTGGACAAACAGATAGGTGTACCCGAAGACGGCAAAGAAGCGCTG
CTGGCGTGGAACGTGACAGGCAACTACTGGGACTTCACCATCGACAAAGCCACGTGCACCGTTGTGGCTCCTCCCGGGGT
ATCTGTTGTGTCCGCCACGGGGGCCACAGGCAGACCCGGTGAACACGGCACGACGTTCACCGCATCGTACCACGGGGCAG
AAGCCGCATTTGCCACCACCAAGCCGCTGCCGCCCCGGGAAGGCTTCACCATATTCACGCGGCTGACACCGCCGGACGGC
CTTGCGGGACCGCAGGGCTTTGCTGCCGTATGGGCTGACAACAAACTTTTCTTTGCCGGAATCGCGCTGCAGTTGCTGCC
CCTTCTGGTCTTTGCCCTCCTTTGGCACAAATTCGGACGCGACCCGCACGGCCCGGTGGTAATCCCCCGCTATGAGCCGC
CCGCAGGTATGGACGCGGCATCTGCCGGCAGCCTGCTGCAAAACGCCCCCATGCCGCGCAAACGCGCGCTGATGCTCAGC
ATCGTGCATCTGGCAGCAGAAGGCTGTCTGACCATTGAAACGGAAAAAATGACACATGTTCTGCATGCCACCGGCAAGCC
CTCGTCGGTACCCGCCAACCGGCAGGTGCTGGAAGAGCTGTTCAGGACAGGCAACACAGTGCAGCTGAGCAGCTATAACC
GGCCGGCGCTTTCTTCGGCGGCGGATGCGCTGCAGCGCTCCATGAAAGAACGCTATGACACCCCTGAAATACGCCGCAAC
AACACCTCCAAGCTGCTGCTGTGTGTGCTGAGCAGCATTGCCGCACTGGCAGGCAGTGTACCGCTTGTGTTCGCCGGTGA
TGCCGGAGGATTTATGGCGGGGGCCGCTTCCGGCATGTTGCTGCTCATGGCAGGACTTGTGCCCTACAAGATTCTCAGCA
GGCGGTTCAGCATTCCGGGCATACTGTTCTCTTTGATATTTTTCAGTTTCGCGCTCATCTTTTTTGCCTCTTTCAACAGA
CATGCAGAAGCCAACACCGGCATGGTCATCGTGCTGTGGAACGTGTTTCTGCTCTGGCTTTTCCGCAGACTGATGCCCGC
CTACACCGAAAAAGGCATGGCTCTCGTCAATGAGCTCAAAGGATTCAGACTGTTTCTTTCGCTCACCGAAAAGCAGCGGC
TGCAGATGCAGGACCAGCCTGAAATCACCCGCGAACGGTTTGAGGCCCTGTTGCCCTTTGCCATGGCTTTCGGCGTTGAA
CGCCGCTGGGAGGACAGCTTTAAAGCTGCCATGCAGCTGCGCGGCGAAGACAGCACCAACTACGGCATACGCTGGTATGA
CAGGGGTTTTTCCGGCACAGAGATGCGCCATGCCGGACTGGGTGCCGCGCTGGGCAGCAGCATCGGGGCATCAGTCTCCG
CCAGCATGCCGGAATCCACCGTCTCCGGTTCTTCCGGCGGCTTCAGCAGCGGCGGAAGCGGCAGCAGCGGCGGCGGCAGC
GGTTCCGGAGGAGGCGGCGGCGGGGGCGGCGGCTGGTAA

Upstream 100 bases:

>100_bases
CCCGCCGCTGATACCGGCCCTGTGCAGCCGTACGCACCTGAAAACCGGCCGCAACGCGTTGCGGCCTTTACGACGCCCCT
TGCTTATCAGGATCATCACC

Downstream 100 bases:

>100_bases
TCATCCTATTGCGCCCGCACGTGAAGTGCGGCATCATCGTAACAAGCAGAGAATGCAGCGGGTACACGCGGACAATGCCG
CGTGCGCACCCGCCGCCATC

Product: putative transmembrane signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 652; Mature: 651

Protein sequence:

>652_residues
MSHTLQKRTALLAACLAAVPLLCALLLSSPVPACAARQAPAAERILLFDSTVHIQPDGLLSERETIRVNVLGQNIRRGIF
RDIPVRYKLGMGLRRRHALIVQNVLRNGKPEPYAVEQRNHVLRILIGSGHAMLDHGVHTYEITYTLDKQIGVPEDGKEAL
LAWNVTGNYWDFTIDKATCTVVAPPGVSVVSATGATGRPGEHGTTFTASYHGAEAAFATTKPLPPREGFTIFTRLTPPDG
LAGPQGFAAVWADNKLFFAGIALQLLPLLVFALLWHKFGRDPHGPVVIPRYEPPAGMDAASAGSLLQNAPMPRKRALMLS
IVHLAAEGCLTIETEKMTHVLHATGKPSSVPANRQVLEELFRTGNTVQLSSYNRPALSSAADALQRSMKERYDTPEIRRN
NTSKLLLCVLSSIAALAGSVPLVFAGDAGGFMAGAASGMLLLMAGLVPYKILSRRFSIPGILFSLIFFSFALIFFASFNR
HAEANTGMVIVLWNVFLLWLFRRLMPAYTEKGMALVNELKGFRLFLSLTEKQRLQMQDQPEITRERFEALLPFAMAFGVE
RRWEDSFKAAMQLRGEDSTNYGIRWYDRGFSGTEMRHAGLGAALGSSIGASVSASMPESTVSGSSGGFSSGGSGSSGGGS
GSGGGGGGGGGW

Sequences:

>Translated_652_residues
MSHTLQKRTALLAACLAAVPLLCALLLSSPVPACAARQAPAAERILLFDSTVHIQPDGLLSERETIRVNVLGQNIRRGIF
RDIPVRYKLGMGLRRRHALIVQNVLRNGKPEPYAVEQRNHVLRILIGSGHAMLDHGVHTYEITYTLDKQIGVPEDGKEAL
LAWNVTGNYWDFTIDKATCTVVAPPGVSVVSATGATGRPGEHGTTFTASYHGAEAAFATTKPLPPREGFTIFTRLTPPDG
LAGPQGFAAVWADNKLFFAGIALQLLPLLVFALLWHKFGRDPHGPVVIPRYEPPAGMDAASAGSLLQNAPMPRKRALMLS
IVHLAAEGCLTIETEKMTHVLHATGKPSSVPANRQVLEELFRTGNTVQLSSYNRPALSSAADALQRSMKERYDTPEIRRN
NTSKLLLCVLSSIAALAGSVPLVFAGDAGGFMAGAASGMLLLMAGLVPYKILSRRFSIPGILFSLIFFSFALIFFASFNR
HAEANTGMVIVLWNVFLLWLFRRLMPAYTEKGMALVNELKGFRLFLSLTEKQRLQMQDQPEITRERFEALLPFAMAFGVE
RRWEDSFKAAMQLRGEDSTNYGIRWYDRGFSGTEMRHAGLGAALGSSIGASVSASMPESTVSGSSGGFSSGGSGSSGGGS
GSGGGGGGGGGW
>Mature_651_residues
SHTLQKRTALLAACLAAVPLLCALLLSSPVPACAARQAPAAERILLFDSTVHIQPDGLLSERETIRVNVLGQNIRRGIFR
DIPVRYKLGMGLRRRHALIVQNVLRNGKPEPYAVEQRNHVLRILIGSGHAMLDHGVHTYEITYTLDKQIGVPEDGKEALL
AWNVTGNYWDFTIDKATCTVVAPPGVSVVSATGATGRPGEHGTTFTASYHGAEAAFATTKPLPPREGFTIFTRLTPPDGL
AGPQGFAAVWADNKLFFAGIALQLLPLLVFALLWHKFGRDPHGPVVIPRYEPPAGMDAASAGSLLQNAPMPRKRALMLSI
VHLAAEGCLTIETEKMTHVLHATGKPSSVPANRQVLEELFRTGNTVQLSSYNRPALSSAADALQRSMKERYDTPEIRRNN
TSKLLLCVLSSIAALAGSVPLVFAGDAGGFMAGAASGMLLLMAGLVPYKILSRRFSIPGILFSLIFFSFALIFFASFNRH
AEANTGMVIVLWNVFLLWLFRRLMPAYTEKGMALVNELKGFRLFLSLTEKQRLQMQDQPEITRERFEALLPFAMAFGVER
RWEDSFKAAMQLRGEDSTNYGIRWYDRGFSGTEMRHAGLGAALGSSIGASVSASMPESTVSGSSGGFSSGGSGSSGGGSG
SGGGGGGGGGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787522, Length=476, Percent_Identity=25.2100840336134, Blast_Score=97, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018702 [H]

Pfam domain/function: PF09972 DUF2207 [H]

EC number: NA

Molecular weight: Translated: 70153; Mature: 70022

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHTLQKRTALLAACLAAVPLLCALLLSSPVPACAARQAPAAERILLFDSTVHIQPDGLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCEEEEEECEEEECCCCCC
SERETIRVNVLGQNIRRGIFRDIPVRYKLGMGLRRRHALIVQNVLRNGKPEPYAVEQRNH
CCCCEEEEEEECHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEECCCCC
VLRILIGSGHAMLDHGVHTYEITYTLDKQIGVPEDGKEALLAWNVTGNYWDFTIDKATCT
EEEEEEECCCCHHHCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCEEEE
VVAPPGVSVVSATGATGRPGEHGTTFTASYHGAEAAFATTKPLPPREGFTIFTRLTPPDG
EECCCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCEEEEEECCCCC
LAGPQGFAAVWADNKLFFAGIALQLLPLLVFALLWHKFGRDPHGPVVIPRYEPPAGMDAA
CCCCCCCEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCH
SAGSLLQNAPMPRKRALMLSIVHLAAEGCLTIETEKMTHVLHATGKPSSVPANRQVLEEL
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCCCCCCCCHHHHHHH
FRTGNTVQLSSYNRPALSSAADALQRSMKERYDTPEIRRNNTSKLLLCVLSSIAALAGSV
HHCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHCCC
PLVFAGDAGGFMAGAASGMLLLMAGLVPYKILSRRFSIPGILFSLIFFSFALIFFASFNR
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
HAEANTGMVIVLWNVFLLWLFRRLMPAYTEKGMALVNELKGFRLFLSLTEKQRLQMQDQP
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHCCCCCCC
EITRERFEALLPFAMAFGVERRWEDSFKAAMQLRGEDSTNYGIRWYDRGFSGTEMRHAGL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHCC
GAALGSSIGASVSASMPESTVSGSSGGFSSGGSGSSGGGSGSGGGGGGGGGW
CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SHTLQKRTALLAACLAAVPLLCALLLSSPVPACAARQAPAAERILLFDSTVHIQPDGLL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCEEEEEECEEEECCCCCC
SERETIRVNVLGQNIRRGIFRDIPVRYKLGMGLRRRHALIVQNVLRNGKPEPYAVEQRNH
CCCCEEEEEEECHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEECCCCC
VLRILIGSGHAMLDHGVHTYEITYTLDKQIGVPEDGKEALLAWNVTGNYWDFTIDKATCT
EEEEEEECCCCHHHCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCEEEE
VVAPPGVSVVSATGATGRPGEHGTTFTASYHGAEAAFATTKPLPPREGFTIFTRLTPPDG
EECCCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCEEEEEECCCCC
LAGPQGFAAVWADNKLFFAGIALQLLPLLVFALLWHKFGRDPHGPVVIPRYEPPAGMDAA
CCCCCCCEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCH
SAGSLLQNAPMPRKRALMLSIVHLAAEGCLTIETEKMTHVLHATGKPSSVPANRQVLEEL
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCCCCCCCCHHHHHHH
FRTGNTVQLSSYNRPALSSAADALQRSMKERYDTPEIRRNNTSKLLLCVLSSIAALAGSV
HHCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHCCC
PLVFAGDAGGFMAGAASGMLLLMAGLVPYKILSRRFSIPGILFSLIFFSFALIFFASFNR
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
HAEANTGMVIVLWNVFLLWLFRRLMPAYTEKGMALVNELKGFRLFLSLTEKQRLQMQDQP
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHCCCCCCC
EITRERFEALLPFAMAFGVERRWEDSFKAAMQLRGEDSTNYGIRWYDRGFSGTEMRHAGL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHCC
GAALGSSIGASVSASMPESTVSGSSGGFSSGGSGSSGGGSGSGGGGGGGGGW
CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]