| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355506
Identifier: 78355506
GI number: 78355506
Start: 469796
End: 470563
Strand: Reverse
Name: 78355506
Synonym: Dde_0459
Alternate gene names: NA
Gene position: 470563-469796 (Counterclockwise)
Preceding gene: 78355507
Following gene: 78355505
Centisome position: 12.61
GC content: 54.69
Gene sequence:
>768_bases ATGTGGTATTCCATACGTACAGTTGTTTTCATCATGCTTCTGCTGGCCGTTACGGCGCTGCCGTTTTATGCCGCGCAAAA AACGGAACGGCCGCTGGTGCTTGTATGCGACGTATGGCCACCCTATCAGACCCAGCACGACGGGCGTGTCAACGGGTTTG CCACACGCGTTGTGCACCACGTGCTTAACGGCATGGGGGTGCCGGTAAAAAGCACCAAGGCGTTTCCATGGCAGCGCGCC ATGGGCATTTTTCAGGCAGGCGGGGCCGATGTGCTGTTTTCGGCAAACCATACGGCCGACCGGGAGATGTTTGCGCGCTA CCCGGAAGAATCTCTGGTGGATTCACCATGGATACTCTGGAGCAGGAAGAAAAACCTGCGCTCGCTTGACGACCTGCGGG GGCTTAAAATCGGTGTTGTAAGCGGTTACAGCTATACTCTGGAATTCTGGGACTACATCGAGACCCACTGCGTGGTGGAA AAGGTGCATTCCGACGCCATCAACTTTAAGAAACTGGCCATGGGCCGGCTGGACGCCATTGCCGCGGAATACGGCAACGG GCGGCATGTGCTGAACTCCCTCCACCTAAAGGGAATCAGACCGCATACCGATATTGTAATAAAGACTGACGGTCTGTACG CCATCTTCAACAAAAACACCGTGACAGAAAAATTTGTACAGGAGTTTTCCTTCCGGCTGAAGGAGTACAAAGCGTCAGAA GGGTACCGGGATCTGTACCGGGCATACTTCATGCCCGGGCAGGAGTGA
Upstream 100 bases:
>100_bases AAAAATGCTCACCCGCGCCTCGTGCCATGTGCGCGCCGGACAGAAGCCGACTTAAAAAAATACTGTCTGGTTCCCCGCAT TTTCTGTAGTATCCTCAACC
Downstream 100 bases:
>100_bases CCACCCTGCAGATCCGGAGCCGCAGGCAGACAGATGATAACCTGTTGTTCCGCCGCCGGAGCCGACATATCCGCGCAGCC TGCGGAGTTATCATTGCCGC
Product: amino acid ABC transporter periplasmic protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MWYSIRTVVFIMLLLAVTALPFYAAQKTERPLVLVCDVWPPYQTQHDGRVNGFATRVVHHVLNGMGVPVKSTKAFPWQRA MGIFQAGGADVLFSANHTADREMFARYPEESLVDSPWILWSRKKNLRSLDDLRGLKIGVVSGYSYTLEFWDYIETHCVVE KVHSDAINFKKLAMGRLDAIAAEYGNGRHVLNSLHLKGIRPHTDIVIKTDGLYAIFNKNTVTEKFVQEFSFRLKEYKASE GYRDLYRAYFMPGQE
Sequences:
>Translated_255_residues MWYSIRTVVFIMLLLAVTALPFYAAQKTERPLVLVCDVWPPYQTQHDGRVNGFATRVVHHVLNGMGVPVKSTKAFPWQRA MGIFQAGGADVLFSANHTADREMFARYPEESLVDSPWILWSRKKNLRSLDDLRGLKIGVVSGYSYTLEFWDYIETHCVVE KVHSDAINFKKLAMGRLDAIAAEYGNGRHVLNSLHLKGIRPHTDIVIKTDGLYAIFNKNTVTEKFVQEFSFRLKEYKASE GYRDLYRAYFMPGQE >Mature_255_residues MWYSIRTVVFIMLLLAVTALPFYAAQKTERPLVLVCDVWPPYQTQHDGRVNGFATRVVHHVLNGMGVPVKSTKAFPWQRA MGIFQAGGADVLFSANHTADREMFARYPEESLVDSPWILWSRKKNLRSLDDLRGLKIGVVSGYSYTLEFWDYIETHCVVE KVHSDAINFKKLAMGRLDAIAAEYGNGRHVLNSLHLKGIRPHTDIVIKTDGLYAIFNKNTVTEKFVQEFSFRLKEYKASE GYRDLYRAYFMPGQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29246; Mature: 29246
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWYSIRTVVFIMLLLAVTALPFYAAQKTERPLVLVCDVWPPYQTQHDGRVNGFATRVVHH CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH VLNGMGVPVKSTKAFPWQRAMGIFQAGGADVLFSANHTADREMFARYPEESLVDSPWILW HHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCHHHHCCCCEEEE SRKKNLRSLDDLRGLKIGVVSGYSYTLEFWDYIETHCVVEKVHSDAINFKKLAMGRLDAI CCCCCHHHHHHHCCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAEYGNGRHVLNSLHLKGIRPHTDIVIKTDGLYAIFNKNTVTEKFVQEFSFRLKEYKASE HHHCCCCHHHHHHHHCCCCCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHCCC GYRDLYRAYFMPGQE CHHHHHHHHCCCCCC >Mature Secondary Structure MWYSIRTVVFIMLLLAVTALPFYAAQKTERPLVLVCDVWPPYQTQHDGRVNGFATRVVHH CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH VLNGMGVPVKSTKAFPWQRAMGIFQAGGADVLFSANHTADREMFARYPEESLVDSPWILW HHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCHHHHCCCCEEEE SRKKNLRSLDDLRGLKIGVVSGYSYTLEFWDYIETHCVVEKVHSDAINFKKLAMGRLDAI CCCCCHHHHHHHCCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAEYGNGRHVLNSLHLKGIRPHTDIVIKTDGLYAIFNKNTVTEKFVQEFSFRLKEYKASE HHHCCCCHHHHHHHHCCCCCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHCCC GYRDLYRAYFMPGQE CHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA