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The map label for this gene is dcrA [H]

Identifier: 78355505

GI number: 78355505

Start: 467454

End: 469634

Strand: Reverse

Name: dcrA [H]

Synonym: Dde_0458

Alternate gene names: 78355505

Gene position: 469634-467454 (Counterclockwise)

Preceding gene: 78355506

Following gene: 78355490

Centisome position: 12.59

GC content: 57.96

Gene sequence:

>2181_bases
ATGAAGGGAACCATATCGCTCAAGACCAAAATGATCGCGTTCTGCCTTGCCATCGGGCTTCTGCCGTTCATCGGCATGGG
GTATTACGCCTTCACATCAGCTTCAGACAAACTCGAAGAACAGTATTTCGGTCAGCTTACCTCGCTCAGGGCAATCAAGC
AGCATGCCGCGCAGGAAATCATCCGCTCATGGAACAACGAAATACTGCAGCTGGCACGCAGCACGGCGGCTGCGGATTTT
CTTTCACGCTTCATCATGTATGCCGAAACACCGGATGCAAACACGGCATCAGGCCTTGATGTCACCTCCGCTGCATATAC
CCGCCTGCACAAACGCGCGGTGCCGCACTTTGAAAACTATGTGCTCGAAAAAGGCTATTACGACCTTTTTCTGGTGGATG
GAAAAGGACGCATTCTTTTTACACAGGCCAGAGAATCAGACCTGGGACAAAGTCTGACACAGGGACCGCTTGCCGGCAGC
AGCATAGCGCAGGCATGGCAGACCGCGCAGCAGAGCGATATAGGCTTTGCCGATTTCCGGCCCTATGCCCCCTCAAACGG
AGAGCCCGCCGCCTTCATCGCCAGAAAGATAGAAAACAGAAGCGGCATTGAGGGCACCGTCATCCTGCAGATACCCCTCG
ACCGCATCAACGCGCTCATGCAGCTGCGCGACGGCATGGGTCAGACGGGTGAAACCTATCTTGTAGGTCAGGACAAGCTG
ATGCGCTCGGATTCATTCCTTGAACCGGAATTTCATTCCGTTGCCGGATCATTCCGCAATCCGCAGAAAGGCAAGGTGGA
TACCGAAGCATCACGCAGCGCGCTTGAGGGCAGGTCCGGCACACGCATCATCACCGACTACAACGGCAATCCGGTGTTGT
CGTCATTCGCACCGCTTGAAGTGCTGTCCGGCGTAAAATGGGGCATCATCGCCGAAATAGACGAGGCTGAAGCCTTTGCC
GGCGTAACGGCACTGCGCAACGCCCTTTTCATCGCCGGTGCGGGCATACTGCTGCTGGTCACCGCCACCACACTGTTCAT
CCTCAGGCGCGAGCTCATCTCTCCGCTTTCCATCATCGAACATTACGCCAGCGACGTGGCCGGCGGCAATCTGGATGCGC
AGGTAAGCGGCTCATTCTCGCCCGAAATAGCCTCCATGCAACATTCCATTGCCACCATGGTGGGATCGCTGAAAGAAAAA
ATGGCCGAGGCCAACGCCAAAAGCAAAGAAGCCTCGCTACAGGCCGACAATGCGCAGCAGGCTCTGGAGCAGGCCAGAGA
GCAGCAGGCCCGCGTGGCCAAGCTTGTGGAACATATGCAGGAACTTTCCGGCCGGGCAAACAATATTGCCGAACGCATGT
CATCAGCCGCCGACGAACTGACCGCACAGGTCGATCAGGTAAGCAACGGTGCCTCCATACAGCGCGACAGAATGCAGGAA
ACAGCCACCGCCATGGAACAGATAAACGCCACGGTGAACGAGGTGGCCCAGAACTCGACACTGGCCGCCACCAGCTCTTC
CGAAGCACGGGACCGCGCACAGGACGGGGCGGGCATCGTGCAGCAGGCCATCGAGGCCATAGATCAGGTTAACACCACTG
CTCTGTCGCTCAAGGACAGCATGCGGTCGCTGGGCGAACAGGCCGATTCCATCGGACAGGTGATGACCGTTATCAGCGAC
ATAGCCGACCAGACAAACCTGCTGGCGCTCAACGCGGCCATTGAAGCCGCACGCGCCGGTGATGCGGGACGCGGCTTTGC
CGTTGTGGCCGATGAAGTGCGCAAACTGGCAGAAAAAACCATGAGCGCCACCAAGGAAGTGGGCGACCGCATCAGCAGCA
TTCAGCAGGCCGCAGGCAAAAACATTGAAAGCATGGACAAGGCCGTGACCGCCATCCAGCAGGCCACAGGCAAAGCGAAC
GACTCCGGCGCGGCGCTGGACTCCATTGTCACCGTGGCGGACGGCACTGCACTGCAGGTTTCCAGCATCGCCACCGCAGC
CGAAGAACAGGCCGCGGCCATGGAACAGATAAACCGCTCGGTGGAAGAGGTGACCATGATAGTCAGCGAAACCACCGAAG
GCATGATGCAGGCGGCGGAAGCAGTGCAGGAACTGGCCACGCAGGCCAACGAACTGCGTTCGCTCATCCAGTCGCTGGAA
GAAGCCGGAAAAACAGCATGA

Upstream 100 bases:

>100_bases
CCGACATATCCGCGCAGCCTGCGGAGTTATCATTGCCGCCGGGCTCACCTGACAGCACGCTTATTTTTTCTGTGCACATG
CACATTCCGGAGGATTCAGC

Downstream 100 bases:

>100_bases
TCTGCGCGCGAACATCAGCGTAAAGCGCCTGCACCCGCGTGATGAACCGCACACCGGTGCAATCCGGCAGACCCCGCACA
AAAAAACAGACAGGCCGCCC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 726; Mature: 726

Protein sequence:

>726_residues
MKGTISLKTKMIAFCLAIGLLPFIGMGYYAFTSASDKLEEQYFGQLTSLRAIKQHAAQEIIRSWNNEILQLARSTAAADF
LSRFIMYAETPDANTASGLDVTSAAYTRLHKRAVPHFENYVLEKGYYDLFLVDGKGRILFTQARESDLGQSLTQGPLAGS
SIAQAWQTAQQSDIGFADFRPYAPSNGEPAAFIARKIENRSGIEGTVILQIPLDRINALMQLRDGMGQTGETYLVGQDKL
MRSDSFLEPEFHSVAGSFRNPQKGKVDTEASRSALEGRSGTRIITDYNGNPVLSSFAPLEVLSGVKWGIIAEIDEAEAFA
GVTALRNALFIAGAGILLLVTATTLFILRRELISPLSIIEHYASDVAGGNLDAQVSGSFSPEIASMQHSIATMVGSLKEK
MAEANAKSKEASLQADNAQQALEQAREQQARVAKLVEHMQELSGRANNIAERMSSAADELTAQVDQVSNGASIQRDRMQE
TATAMEQINATVNEVAQNSTLAATSSSEARDRAQDGAGIVQQAIEAIDQVNTTALSLKDSMRSLGEQADSIGQVMTVISD
IADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMSATKEVGDRISSIQQAAGKNIESMDKAVTAIQQATGKAN
DSGAALDSIVTVADGTALQVSSIATAAEEQAAAMEQINRSVEEVTMIVSETTEGMMQAAEAVQELATQANELRSLIQSLE
EAGKTA

Sequences:

>Translated_726_residues
MKGTISLKTKMIAFCLAIGLLPFIGMGYYAFTSASDKLEEQYFGQLTSLRAIKQHAAQEIIRSWNNEILQLARSTAAADF
LSRFIMYAETPDANTASGLDVTSAAYTRLHKRAVPHFENYVLEKGYYDLFLVDGKGRILFTQARESDLGQSLTQGPLAGS
SIAQAWQTAQQSDIGFADFRPYAPSNGEPAAFIARKIENRSGIEGTVILQIPLDRINALMQLRDGMGQTGETYLVGQDKL
MRSDSFLEPEFHSVAGSFRNPQKGKVDTEASRSALEGRSGTRIITDYNGNPVLSSFAPLEVLSGVKWGIIAEIDEAEAFA
GVTALRNALFIAGAGILLLVTATTLFILRRELISPLSIIEHYASDVAGGNLDAQVSGSFSPEIASMQHSIATMVGSLKEK
MAEANAKSKEASLQADNAQQALEQAREQQARVAKLVEHMQELSGRANNIAERMSSAADELTAQVDQVSNGASIQRDRMQE
TATAMEQINATVNEVAQNSTLAATSSSEARDRAQDGAGIVQQAIEAIDQVNTTALSLKDSMRSLGEQADSIGQVMTVISD
IADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMSATKEVGDRISSIQQAAGKNIESMDKAVTAIQQATGKAN
DSGAALDSIVTVADGTALQVSSIATAAEEQAAAMEQINRSVEEVTMIVSETTEGMMQAAEAVQELATQANELRSLIQSLE
EAGKTA
>Mature_726_residues
MKGTISLKTKMIAFCLAIGLLPFIGMGYYAFTSASDKLEEQYFGQLTSLRAIKQHAAQEIIRSWNNEILQLARSTAAADF
LSRFIMYAETPDANTASGLDVTSAAYTRLHKRAVPHFENYVLEKGYYDLFLVDGKGRILFTQARESDLGQSLTQGPLAGS
SIAQAWQTAQQSDIGFADFRPYAPSNGEPAAFIARKIENRSGIEGTVILQIPLDRINALMQLRDGMGQTGETYLVGQDKL
MRSDSFLEPEFHSVAGSFRNPQKGKVDTEASRSALEGRSGTRIITDYNGNPVLSSFAPLEVLSGVKWGIIAEIDEAEAFA
GVTALRNALFIAGAGILLLVTATTLFILRRELISPLSIIEHYASDVAGGNLDAQVSGSFSPEIASMQHSIATMVGSLKEK
MAEANAKSKEASLQADNAQQALEQAREQQARVAKLVEHMQELSGRANNIAERMSSAADELTAQVDQVSNGASIQRDRMQE
TATAMEQINATVNEVAQNSTLAATSSSEARDRAQDGAGIVQQAIEAIDQVNTTALSLKDSMRSLGEQADSIGQVMTVISD
IADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMSATKEVGDRISSIQQAAGKNIESMDKAVTAIQQATGKAN
DSGAALDSIVTVADGTALQVSSIATAAEEQAAAMEQINRSVEEVTMIVSETTEGMMQAAEAVQELATQANELRSLIQSLE
EAGKTA

Specific function: Mediates Taxis Toward Dipeptides VIa An Interaction With The Periplasmic Dipeptide-Binding Protein. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Transduce A Signal From The Outsid

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=395, Percent_Identity=28.3544303797468, Blast_Score=122, Evalue=6e-29,
Organism=Escherichia coli, GI1787690, Length=392, Percent_Identity=28.0612244897959, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI1788195, Length=345, Percent_Identity=26.3768115942029, Blast_Score=107, Evalue=3e-24,
Organism=Escherichia coli, GI2367378, Length=258, Percent_Identity=33.3333333333333, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI1789453, Length=273, Percent_Identity=27.4725274725275, Blast_Score=93, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 77544; Mature: 77544

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS50885 HAMP ; PS00107 PROTEIN_KINASE_ATP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGTISLKTKMIAFCLAIGLLPFIGMGYYAFTSASDKLEEQYFGQLTSLRAIKQHAAQEI
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IRSWNNEILQLARSTAAADFLSRFIMYAETPDANTASGLDVTSAAYTRLHKRAVPHFENY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHH
VLEKGYYDLFLVDGKGRILFTQARESDLGQSLTQGPLAGSSIAQAWQTAQQSDIGFADFR
HHHCCCEEEEEECCCCCEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC
PYAPSNGEPAAFIARKIENRSGIEGTVILQIPLDRINALMQLRDGMGQTGETYLVGQDKL
CCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCEEEECCHHH
MRSDSFLEPEFHSVAGSFRNPQKGKVDTEASRSALEGRSGTRIITDYNGNPVLSSFAPLE
HCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCHHCCCHHH
VLSGVKWGIIAEIDEAEAFAGVTALRNALFIAGAGILLLVTATTLFILRRELISPLSIIE
HHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HYASDVAGGNLDAQVSGSFSPEIASMQHSIATMVGSLKEKMAEANAKSKEASLQADNAQQ
HHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHH
ALEQAREQQARVAKLVEHMQELSGRANNIAERMSSAADELTAQVDQVSNGASIQRDRMQE
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
TATAMEQINATVNEVAQNSTLAATSSSEARDRAQDGAGIVQQAIEAIDQVNTTALSLKDS
HHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
MRSLGEQADSIGQVMTVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKT
HHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
MSATKEVGDRISSIQQAAGKNIESMDKAVTAIQQATGKANDSGAALDSIVTVADGTALQV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEH
SSIATAAEEQAAAMEQINRSVEEVTMIVSETTEGMMQAAEAVQELATQANELRSLIQSLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAGKTA
HCCCCC
>Mature Secondary Structure
MKGTISLKTKMIAFCLAIGLLPFIGMGYYAFTSASDKLEEQYFGQLTSLRAIKQHAAQEI
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IRSWNNEILQLARSTAAADFLSRFIMYAETPDANTASGLDVTSAAYTRLHKRAVPHFENY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHH
VLEKGYYDLFLVDGKGRILFTQARESDLGQSLTQGPLAGSSIAQAWQTAQQSDIGFADFR
HHHCCCEEEEEECCCCCEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC
PYAPSNGEPAAFIARKIENRSGIEGTVILQIPLDRINALMQLRDGMGQTGETYLVGQDKL
CCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCEEEECCHHH
MRSDSFLEPEFHSVAGSFRNPQKGKVDTEASRSALEGRSGTRIITDYNGNPVLSSFAPLE
HCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCHHCCCHHH
VLSGVKWGIIAEIDEAEAFAGVTALRNALFIAGAGILLLVTATTLFILRRELISPLSIIE
HHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HYASDVAGGNLDAQVSGSFSPEIASMQHSIATMVGSLKEKMAEANAKSKEASLQADNAQQ
HHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHH
ALEQAREQQARVAKLVEHMQELSGRANNIAERMSSAADELTAQVDQVSNGASIQRDRMQE
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
TATAMEQINATVNEVAQNSTLAATSSSEARDRAQDGAGIVQQAIEAIDQVNTTALSLKDS
HHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
MRSLGEQADSIGQVMTVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKT
HHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
MSATKEVGDRISSIQQAAGKNIESMDKAVTAIQQATGKANDSGAALDSIVTVADGTALQV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEH
SSIATAAEEQAAAMEQINRSVEEVTMIVSETTEGMMQAAEAVQELATQANELRSLIQSLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAGKTA
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]