Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is ygiN [C]

Identifier: 78355484

GI number: 78355484

Start: 443608

End: 443904

Strand: Reverse

Name: ygiN [C]

Synonym: Dde_0437

Alternate gene names: 78355484

Gene position: 443904-443608 (Counterclockwise)

Preceding gene: 78355490

Following gene: 78355481

Centisome position: 11.9

GC content: 58.59

Gene sequence:

>297_bases
ATGATAACCGTCACCGTACACATACCCGTCAAACCGCAGCATGCGGCGGACTTCATCAGCCATATGCATGCGCTGGCACC
GGTGGTACGCGCCGAACAGGGCTGTCTGACGTACAACCTGTACACCGACCCGTACCGGCCTGATATGCTTTTCATGTACG
AAGAATGGCAGGACATGGATGCGCTGCGCGCCCACCTTGAACAGCCCCACATGAACGAGCACCGCCGCACCACAAAAGAC
TGGCTTGCCGGCGATGTAACCCTGCACACAACCCGGAGCACTCCGGTAACGCTGTAG

Upstream 100 bases:

>100_bases
TGATATACAACCGGCAGGCGGGAGTCGCTGTCAAAACCCCGTCAGACCTCATACACCGGCCGCGGGCGGCTTGTTCCGCA
GCGCGGCAGCAAGGAGCATC

Downstream 100 bases:

>100_bases
CCGGCGCGGCGCCTTCAGGCGGCAGTCTGCCTGCCGGAGCGGTTCCGGCAGACTGCGTCCGTGCTGTCCCTGCCACTGTC
ATGCACCGCGGCGGCATGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MITVTVHIPVKPQHAADFISHMHALAPVVRAEQGCLTYNLYTDPYRPDMLFMYEEWQDMDALRAHLEQPHMNEHRRTTKD
WLAGDVTLHTTRSTPVTL

Sequences:

>Translated_98_residues
MITVTVHIPVKPQHAADFISHMHALAPVVRAEQGCLTYNLYTDPYRPDMLFMYEEWQDMDALRAHLEQPHMNEHRRTTKD
WLAGDVTLHTTRSTPVTL
>Mature_98_residues
MITVTVHIPVKPQHAADFISHMHALAPVVRAEQGCLTYNLYTDPYRPDMLFMYEEWQDMDALRAHLEQPHMNEHRRTTKD
WLAGDVTLHTTRSTPVTL

Specific function: Unknown

COG id: COG1359

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 260 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11411; Mature: 11411

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVTVHIPVKPQHAADFISHMHALAPVVRAEQGCLTYNLYTDPYRPDMLFMYEEWQDMD
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCHH
ALRAHLEQPHMNEHRRTTKDWLAGDVTLHTTRSTPVTL
HHHHHHCCCCCCCHHCCCHHHHCCCEEEEECCCCCCCC
>Mature Secondary Structure
MITVTVHIPVKPQHAADFISHMHALAPVVRAEQGCLTYNLYTDPYRPDMLFMYEEWQDMD
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCHH
ALRAHLEQPHMNEHRRTTKDWLAGDVTLHTTRSTPVTL
HHHHHHCCCCCCCHHCCCHHHHCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA