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The map label for this gene is dcrA [H]

Identifier: 78355481

GI number: 78355481

Start: 439388

End: 441127

Strand: Reverse

Name: dcrA [H]

Synonym: Dde_0434

Alternate gene names: 78355481

Gene position: 441127-439388 (Counterclockwise)

Preceding gene: 78355484

Following gene: 78355480

Centisome position: 11.83

GC content: 57.01

Gene sequence:

>1740_bases
ATGTCTTTTTACACACGCATGAACACCGTTTTACTGGCAGCCGGAATCTGCATTGTGCTTTTTCCGGTGTGCTCATGGCT
CATCCTGCCCGTACAGGCGCACACAGGCACGTTTATAACCGTGTACGGCGTACTGACTCTCACGGGCTGCGGTTTCATTG
CCGCGGGGCTGTATCAGCTGCATGCGGGCTTCAGCCGCCCCCTTGAAAAGCTGCACGCCTATACGGCCGCCCTGCGTGAC
AGCCCCGCCACTGTAACGCCACAGCTTGCAGGCGCGGCGGAACTGCACGCGCTGGCAGAGGAAATACACCGCACGGCAAC
GGCGCTGGTGCAGAATGCCGACAGCTACAGCCCCGCAGCGCAGGCTGCCGGCACCCTGTCGGAAAAATTTGAACAAAGTA
CCCGTGAGGCACAGGCCTACCGCACCGATGTGGAAATTATGCTCTCTTCGCTGCACAAAGCCACACAGAAGGCCGGCGAC
ATATCCGGAGAACTTACCGGTTCGCTCAGAACCGTGACGGCGGACATAGACCATGTGACCGGCGGCATAAGCGTGCAGAA
CAGTAAAACACAACAGATAGCCATTGCCATGAACGAAATGAACACGGCGGTGCTTGAAGTGGCACGCAACGCGGCATCTG
CGGCATCACAGGCTGCCCGGTCGCAGGAAAAGGCGCAGGCCGGATCGCGCGAGGTGCACAAGGCACTGGAGCTTATAACC
GATGTCGAGGAAAACATAGGCGCCCTGAAAACAACCATGGACGAACTGGGCGCGCAGGCCGAATCCATAGGTGTGGTGCT
TAATGTCATCAACGATATTGCAGACCAGACCAATCTGCTGGCGCTTAATGCGGCCATAGAGTCGGCCCGCGCAGGTGAAG
CGGGACGCGGTTTTGCCGTGGTGGCCGACGAAGTGCGCAAGCTGGCGGAAAAAACGGTATCCGCCACCAAGGAAGTGAAC
GAGGTGGTGCACGGCATCCGGCGCGTGGCCAGAAACAGCATGGATGCCGTGGACGAAGCTGCCGGCAAGATAGGCCATTC
CGCCACAGCCGCGGCCGACTCGGAACGCTACATGACCGATCTTATCGATATTATCTCTCAGGCATCCTACATGGTGCAGA
ACATGGCCGCAGCATCCGAGGAACAATCAGCCACGTCGGACCAGATCAACGCGGCCATCGCCGGAATAAAAGACACGGCA
GAAGAAACGACCGCAGGCATGACCCGTTCGGCAGAAGCTCTGGCACGCATTACAGGGCTCATCGCGGAGCTGGAATCCAT
TCTGGCAGCTCTGGCAAAAGCCGAAACCGGCAAAACCGTATCAACGGGCGACGGGCAGTTCCTCAACTGGACGGACGACC
TTTCCGTCAATATCGGGCATCTGGACAGCCAGCATAAAAATCTGGTGGCGCTCATCAACGAGCTGGCCGCCGCCATGAAG
GCCGGTAAGGCAAAAAGCGTCATGCTGGATACACTGGGCAGGCTGAAGGAATACACGCTGACCCATTTCAAGGAAGAAGA
GGATCTTTTTGACAGATACGATGTGCCCGGTGCCAGAGATCACAAAAAAATACACCAGAGTCTGCGTGAAAAAGTGCTCA
GCGTGGAGCAGGACATTGTTTCAGGCCGAATAACCGTCTCGCTGGAACTGCTGGAATTTCTCAAGGAATGGATACTGAAC
CACATTCAGGTGGTGGATAAGCAGTACTCCGCGTTTCTGAACAGCAAAGGGGTGCGCTGA

Upstream 100 bases:

>100_bases
TTGTAAAAATCATGGGGGCGGAAGGCCTGTCCTGTTTACAGTATACAGCACCCTGATTTTTTACAGGGTCATATCTGCCA
CCGGCAACCGCGAGGGAACG

Downstream 100 bases:

>100_bases
CGCCCCGCGCCTGCCCCCCGGCACTCCCGCACAGCCGCATGCCGCCTGAACAGCCTTACCGCCGCATACGCCCGCAGATG
CCGCTCCGGACACCGGTGCG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 578

Protein sequence:

>579_residues
MSFYTRMNTVLLAAGICIVLFPVCSWLILPVQAHTGTFITVYGVLTLTGCGFIAAGLYQLHAGFSRPLEKLHAYTAALRD
SPATVTPQLAGAAELHALAEEIHRTATALVQNADSYSPAAQAAGTLSEKFEQSTREAQAYRTDVEIMLSSLHKATQKAGD
ISGELTGSLRTVTADIDHVTGGISVQNSKTQQIAIAMNEMNTAVLEVARNAASAASQAARSQEKAQAGSREVHKALELIT
DVEENIGALKTTMDELGAQAESIGVVLNVINDIADQTNLLALNAAIESARAGEAGRGFAVVADEVRKLAEKTVSATKEVN
EVVHGIRRVARNSMDAVDEAAGKIGHSATAAADSERYMTDLIDIISQASYMVQNMAAASEEQSATSDQINAAIAGIKDTA
EETTAGMTRSAEALARITGLIAELESILAALAKAETGKTVSTGDGQFLNWTDDLSVNIGHLDSQHKNLVALINELAAAMK
AGKAKSVMLDTLGRLKEYTLTHFKEEEDLFDRYDVPGARDHKKIHQSLREKVLSVEQDIVSGRITVSLELLEFLKEWILN
HIQVVDKQYSAFLNSKGVR

Sequences:

>Translated_579_residues
MSFYTRMNTVLLAAGICIVLFPVCSWLILPVQAHTGTFITVYGVLTLTGCGFIAAGLYQLHAGFSRPLEKLHAYTAALRD
SPATVTPQLAGAAELHALAEEIHRTATALVQNADSYSPAAQAAGTLSEKFEQSTREAQAYRTDVEIMLSSLHKATQKAGD
ISGELTGSLRTVTADIDHVTGGISVQNSKTQQIAIAMNEMNTAVLEVARNAASAASQAARSQEKAQAGSREVHKALELIT
DVEENIGALKTTMDELGAQAESIGVVLNVINDIADQTNLLALNAAIESARAGEAGRGFAVVADEVRKLAEKTVSATKEVN
EVVHGIRRVARNSMDAVDEAAGKIGHSATAAADSERYMTDLIDIISQASYMVQNMAAASEEQSATSDQINAAIAGIKDTA
EETTAGMTRSAEALARITGLIAELESILAALAKAETGKTVSTGDGQFLNWTDDLSVNIGHLDSQHKNLVALINELAAAMK
AGKAKSVMLDTLGRLKEYTLTHFKEEEDLFDRYDVPGARDHKKIHQSLREKVLSVEQDIVSGRITVSLELLEFLKEWILN
HIQVVDKQYSAFLNSKGVR
>Mature_578_residues
SFYTRMNTVLLAAGICIVLFPVCSWLILPVQAHTGTFITVYGVLTLTGCGFIAAGLYQLHAGFSRPLEKLHAYTAALRDS
PATVTPQLAGAAELHALAEEIHRTATALVQNADSYSPAAQAAGTLSEKFEQSTREAQAYRTDVEIMLSSLHKATQKAGDI
SGELTGSLRTVTADIDHVTGGISVQNSKTQQIAIAMNEMNTAVLEVARNAASAASQAARSQEKAQAGSREVHKALELITD
VEENIGALKTTMDELGAQAESIGVVLNVINDIADQTNLLALNAAIESARAGEAGRGFAVVADEVRKLAEKTVSATKEVNE
VVHGIRRVARNSMDAVDEAAGKIGHSATAAADSERYMTDLIDIISQASYMVQNMAAASEEQSATSDQINAAIAGIKDTAE
ETTAGMTRSAEALARITGLIAELESILAALAKAETGKTVSTGDGQFLNWTDDLSVNIGHLDSQHKNLVALINELAAAMKA
GKAKSVMLDTLGRLKEYTLTHFKEEEDLFDRYDVPGARDHKKIHQSLREKVLSVEQDIVSGRITVSLELLEFLKEWILNH
IQVVDKQYSAFLNSKGVR

Specific function: Receptor For The Attractant L-Serine And Related Amino Acids. Is Also Responsible For Chemotaxis Away From A Wide Range Of Repellents, Including Leucine, Indole, And Weak Acids. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of At

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=209, Percent_Identity=31.1004784688995, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1787690, Length=230, Percent_Identity=33.9130434782609, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1788194, Length=212, Percent_Identity=33.0188679245283, Blast_Score=95, Evalue=9e-21,
Organism=Escherichia coli, GI1788195, Length=210, Percent_Identity=33.8095238095238, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1789453, Length=132, Percent_Identity=34.8484848484849, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 61942; Mature: 61810

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFYTRMNTVLLAAGICIVLFPVCSWLILPVQAHTGTFITVYGVLTLTGCGFIAAGLYQL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HAGFSRPLEKLHAYTAALRDSPATVTPQLAGAAELHALAEEIHRTATALVQNADSYSPAA
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
QAAGTLSEKFEQSTREAQAYRTDVEIMLSSLHKATQKAGDISGELTGSLRTVTADIDHVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHEEEEHHHHCC
GGISVQNSKTQQIAIAMNEMNTAVLEVARNAASAASQAARSQEKAQAGSREVHKALELIT
CCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
DVEENIGALKTTMDELGAQAESIGVVLNVINDIADQTNLLALNAAIESARAGEAGRGFAV
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCHHH
VADEVRKLAEKTVSATKEVNEVVHGIRRVARNSMDAVDEAAGKIGHSATAAADSERYMTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHH
LIDIISQASYMVQNMAAASEEQSATSDQINAAIAGIKDTAEETTAGMTRSAEALARITGL
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHH
IAELESILAALAKAETGKTVSTGDGQFLNWTDDLSVNIGHLDSQHKNLVALINELAAAMK
HHHHHHHHHHHHHHCCCCEEECCCCCEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
AGKAKSVMLDTLGRLKEYTLTHFKEEEDLFDRYDVPGARDHKKIHQSLREKVLSVEQDIV
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SGRITVSLELLEFLKEWILNHIQVVDKQYSAFLNSKGVR
CCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SFYTRMNTVLLAAGICIVLFPVCSWLILPVQAHTGTFITVYGVLTLTGCGFIAAGLYQL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HAGFSRPLEKLHAYTAALRDSPATVTPQLAGAAELHALAEEIHRTATALVQNADSYSPAA
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
QAAGTLSEKFEQSTREAQAYRTDVEIMLSSLHKATQKAGDISGELTGSLRTVTADIDHVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHEEEEHHHHCC
GGISVQNSKTQQIAIAMNEMNTAVLEVARNAASAASQAARSQEKAQAGSREVHKALELIT
CCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
DVEENIGALKTTMDELGAQAESIGVVLNVINDIADQTNLLALNAAIESARAGEAGRGFAV
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCHHH
VADEVRKLAEKTVSATKEVNEVVHGIRRVARNSMDAVDEAAGKIGHSATAAADSERYMTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHH
LIDIISQASYMVQNMAAASEEQSATSDQINAAIAGIKDTAEETTAGMTRSAEALARITGL
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHH
IAELESILAALAKAETGKTVSTGDGQFLNWTDDLSVNIGHLDSQHKNLVALINELAAAMK
HHHHHHHHHHHHHHCCCCEEECCCCCEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
AGKAKSVMLDTLGRLKEYTLTHFKEEEDLFDRYDVPGARDHKKIHQSLREKVLSVEQDIV
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SGRITVSLELLEFLKEWILNHIQVVDKQYSAFLNSKGVR
CCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]