| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355451
Identifier: 78355451
GI number: 78355451
Start: 399894
End: 400775
Strand: Reverse
Name: 78355451
Synonym: Dde_0404
Alternate gene names: NA
Gene position: 400775-399894 (Counterclockwise)
Preceding gene: 78355452
Following gene: 78355450
Centisome position: 10.74
GC content: 61.34
Gene sequence:
>882_bases ATGGCAACCCGAATCTCCCGCATTATCGCAACCGCACTGGTTCTGGTAGCAACGCTGGCTTTCAACGCCTCGGCTGCCAT TGTCACTGACTGGACCTATACCGTGGACGGCGCCTTCATCAGCTGGGACACCACGGTAGGCACCACAGGCACGGCTGACG CCCCTGCTCTGGGCATCACAGGGGCAGATCCGGTCGCTCTTTCGTGGGTGTTCGAGGGCGGAGTCTTTTCGCCCGGCATC CAGAACGCTTACAGAAACATCTCGTGGGGCAACATCGCGGACGGAACCGGATTCGGTGAAGATCTGGGTGATGTTCTGCC CGGAGCAACAACCAGCTCGCTGTTTATCACCCCTGCCGGCGGCACGCTGACCACCAACGGTCCCGCCGAAGACGGGCTTG TGCTCAACCATAACAATCAGGCCATCGACGCAGGCAGCATCCAGCTGGAGCGCGGCGTGGTGCGGGCGGTGCTCACGCTC ACTCCCGCAGGCGATCCTTCGCTGCCGCCGTTCTCCACCACTCTCGACTTTGTCTTCTATGAAACTCCCAACTCGGGCAG CATGCCGGATGACCTGTTTGTACTGCTCAATCCCGAAGCGACAACTGAATCTTTCGTCTATGGCGGTCAGGAATACAGAT TCTCGTTCGAGGGCGGATTTGATCCCATCCCGGCGGGCTATCAGCAGTTCCTTGCCAACGACCCTGACTACTTCGGTGAC CCGTCGCTGGCAGTGGGCTGGATAACCGGTGAAGGCGGCCTTAACTCGCGGCTGACACAGGTGGCCATTGTGGCCACGCC GGAACCTTCCACCCTGCTGCTGCTCGGCGCAGGACTGGGCCTGCTGGGCGTAGCCGGACGTCTGCGCCGCCGTTCCGCAT AG
Upstream 100 bases:
>100_bases AAAATTTATTTTCTCCGGCACACATAATGCATCACGGCAGACAAATGAAGTGGCACCACCTTTGCCACCATCAAAGGCTA CTGCCGAGGAGGATACCTCT
Downstream 100 bases:
>100_bases CCACAAAACTCCAAAGAACAAGGCGGGCATCTGCCCGCCTTATTTTTTTGTGGAAATTTTAAATACAATCATGCATGTTA TAGCGCCCGCAGCCATAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MATRISRIIATALVLVATLAFNASAAIVTDWTYTVDGAFISWDTTVGTTGTADAPALGITGADPVALSWVFEGGVFSPGI QNAYRNISWGNIADGTGFGEDLGDVLPGATTSSLFITPAGGTLTTNGPAEDGLVLNHNNQAIDAGSIQLERGVVRAVLTL TPAGDPSLPPFSTTLDFVFYETPNSGSMPDDLFVLLNPEATTESFVYGGQEYRFSFEGGFDPIPAGYQQFLANDPDYFGD PSLAVGWITGEGGLNSRLTQVAIVATPEPSTLLLLGAGLGLLGVAGRLRRRSA
Sequences:
>Translated_293_residues MATRISRIIATALVLVATLAFNASAAIVTDWTYTVDGAFISWDTTVGTTGTADAPALGITGADPVALSWVFEGGVFSPGI QNAYRNISWGNIADGTGFGEDLGDVLPGATTSSLFITPAGGTLTTNGPAEDGLVLNHNNQAIDAGSIQLERGVVRAVLTL TPAGDPSLPPFSTTLDFVFYETPNSGSMPDDLFVLLNPEATTESFVYGGQEYRFSFEGGFDPIPAGYQQFLANDPDYFGD PSLAVGWITGEGGLNSRLTQVAIVATPEPSTLLLLGAGLGLLGVAGRLRRRSA >Mature_292_residues ATRISRIIATALVLVATLAFNASAAIVTDWTYTVDGAFISWDTTVGTTGTADAPALGITGADPVALSWVFEGGVFSPGIQ NAYRNISWGNIADGTGFGEDLGDVLPGATTSSLFITPAGGTLTTNGPAEDGLVLNHNNQAIDAGSIQLERGVVRAVLTLT PAGDPSLPPFSTTLDFVFYETPNSGSMPDDLFVLLNPEATTESFVYGGQEYRFSFEGGFDPIPAGYQQFLANDPDYFGDP SLAVGWITGEGGLNSRLTQVAIVATPEPSTLLLLGAGLGLLGVAGRLRRRSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30428; Mature: 30297
Theoretical pI: Translated: 3.85; Mature: 3.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRISRIIATALVLVATLAFNASAAIVTDWTYTVDGAFISWDTTVGTTGTADAPALGIT CCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCEEEEECCCCCCCCCCCCCEEECC GADPVALSWVFEGGVFSPGIQNAYRNISWGNIADGTGFGEDLGDVLPGATTSSLFITPAG CCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECC GTLTTNGPAEDGLVLNHNNQAIDAGSIQLERGVVRAVLTLTPAGDPSLPPFSTTLDFVFY CEEECCCCCCCCEEEECCCCEEECCCEEEHHHHEEEEEEECCCCCCCCCCCCCEEEEEEE ETPNSGSMPDDLFVLLNPEATTESFVYGGQEYRFSFEGGFDPIPAGYQQFLANDPDYFGD ECCCCCCCCCCEEEEECCCCCCCCEEECCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCC PSLAVGWITGEGGLNSRLTQVAIVATPEPSTLLLLGAGLGLLGVAGRLRRRSA CCEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHCCC >Mature Secondary Structure ATRISRIIATALVLVATLAFNASAAIVTDWTYTVDGAFISWDTTVGTTGTADAPALGIT CHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCEEEEECCCCCCCCCCCCCEEECC GADPVALSWVFEGGVFSPGIQNAYRNISWGNIADGTGFGEDLGDVLPGATTSSLFITPAG CCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECC GTLTTNGPAEDGLVLNHNNQAIDAGSIQLERGVVRAVLTLTPAGDPSLPPFSTTLDFVFY CEEECCCCCCCCEEEECCCCEEECCCEEEHHHHEEEEEEECCCCCCCCCCCCCEEEEEEE ETPNSGSMPDDLFVLLNPEATTESFVYGGQEYRFSFEGGFDPIPAGYQQFLANDPDYFGD ECCCCCCCCCCEEEEECCCCCCCCEEECCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCC PSLAVGWITGEGGLNSRLTQVAIVATPEPSTLLLLGAGLGLLGVAGRLRRRSA CCEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA