Click here to switch to the map view.

The map label for this gene is 78355440

Identifier: 78355440

GI number: 78355440

Start: 386554

End: 387282

Strand: Reverse

Name: 78355440

Synonym: Dde_0393

Alternate gene names: NA

Gene position: 387282-386554 (Counterclockwise)

Preceding gene: 78355441

Following gene: 78355439

Centisome position: 10.38

GC content: 59.67

Gene sequence:

>729_bases
ATGGAACCGTCCGAGAATACCACAGAGGCTCTTGTCAGGCAGCTGACAGGGAGCATCCGGCCCGCAGGCTTTTTTTCCAG
TGCAGGCAACAAAAACACGCAGAACGGCGCCGCCGCCGCATCGCCGCGAGCTATTCTGTGGGCTGCGCGTACACTTGACG
GCGGAGCCGTGGAAGTGACTCCGCTGTTCAACGGCCTTCCGGCAGACCCGGCGCTCAAACTTGCCAAGCGCGTGGAGCGC
ATGCGCTTTCTTGCCCAGTACTGGCCGGAACCGGCCCTGTACCAACGCGATGCCATGCCCACAGTGGCCCTTCAGGGCGC
AGCCACGGGCTATCCGCAAAACAAAGCCGAAAACATGCGTGCCTATCTGCCGCTTATTCCCGCCTATCTGGCCACAGGGC
AACGCCCGAAAGCGGAAACCGTGGTGGAGTATCTGGTGCAGAACGGCGCGGGGCTGAATGAAAAGCTGCGCATGCTGCTG
AACAAGGTGGCTGTTTCGCTGCGTAAAGGCGGCGAACCGCAGAATGCGCTGGACTGTTACATGGTGCTGCGCAAATTTCA
CGGCGAAGACGAACATCTCGACTTCAACATCGCCCGCACACTGTTTGATATGAAGCGATACAAAGAATGTCAGGCGGTGC
TGCAAAAAGCTGTCAGCACCAACCCCGGTTTCCGGCCCGCAGCCGTGTTCCTGCAAAAACTGGAACGGATTCCTGCGCTG
CGGGGCTGA

Upstream 100 bases:

>100_bases
GCCGCATTGACGAACCCGCCTCCGTAGGCCTAGAAGAGTCTTTCCCCCGCGCTGCACACAGGCAGCGCATTTCAGTTTTA
CGAACCCGAGACATACTCAC

Downstream 100 bases:

>100_bases
CCCCCGTCAGGATAACCGCCTCCGGGCGGTTTTTTTCATCTGCCGCTTGCCACCTGCGGCTTCAGCTGTCAGGCTGCGGA
TATCCATGCCACGCAACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Domain Protein; TPR Domain-Containing Protein

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MEPSENTTEALVRQLTGSIRPAGFFSSAGNKNTQNGAAAASPRAILWAARTLDGGAVEVTPLFNGLPADPALKLAKRVER
MRFLAQYWPEPALYQRDAMPTVALQGAATGYPQNKAENMRAYLPLIPAYLATGQRPKAETVVEYLVQNGAGLNEKLRMLL
NKVAVSLRKGGEPQNALDCYMVLRKFHGEDEHLDFNIARTLFDMKRYKECQAVLQKAVSTNPGFRPAAVFLQKLERIPAL
RG

Sequences:

>Translated_242_residues
MEPSENTTEALVRQLTGSIRPAGFFSSAGNKNTQNGAAAASPRAILWAARTLDGGAVEVTPLFNGLPADPALKLAKRVER
MRFLAQYWPEPALYQRDAMPTVALQGAATGYPQNKAENMRAYLPLIPAYLATGQRPKAETVVEYLVQNGAGLNEKLRMLL
NKVAVSLRKGGEPQNALDCYMVLRKFHGEDEHLDFNIARTLFDMKRYKECQAVLQKAVSTNPGFRPAAVFLQKLERIPAL
RG
>Mature_242_residues
MEPSENTTEALVRQLTGSIRPAGFFSSAGNKNTQNGAAAASPRAILWAARTLDGGAVEVTPLFNGLPADPALKLAKRVER
MRFLAQYWPEPALYQRDAMPTVALQGAATGYPQNKAENMRAYLPLIPAYLATGQRPKAETVVEYLVQNGAGLNEKLRMLL
NKVAVSLRKGGEPQNALDCYMVLRKFHGEDEHLDFNIARTLFDMKRYKECQAVLQKAVSTNPGFRPAAVFLQKLERIPAL
RG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26643; Mature: 26643

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPSENTTEALVRQLTGSIRPAGFFSSAGNKNTQNGAAAASPRAILWAARTLDGGAVEVT
CCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCHHHEEEHHCCCCCCEEEE
PLFNGLPADPALKLAKRVERMRFLAQYWPEPALYQRDAMPTVALQGAATGYPQNKAENMR
ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHCCCCCCCCCCCHHHHHH
AYLPLIPAYLATGQRPKAETVVEYLVQNGAGLNEKLRMLLNKVAVSLRKGGEPQNALDCY
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
MVLRKFHGEDEHLDFNIARTLFDMKRYKECQAVLQKAVSTNPGFRPAAVFLQKLERIPAL
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
RG
CC
>Mature Secondary Structure
MEPSENTTEALVRQLTGSIRPAGFFSSAGNKNTQNGAAAASPRAILWAARTLDGGAVEVT
CCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCHHHEEEHHCCCCCCEEEE
PLFNGLPADPALKLAKRVERMRFLAQYWPEPALYQRDAMPTVALQGAATGYPQNKAENMR
ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHCCCCCCCCCCCHHHHHH
AYLPLIPAYLATGQRPKAETVVEYLVQNGAGLNEKLRMLLNKVAVSLRKGGEPQNALDCY
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
MVLRKFHGEDEHLDFNIARTLFDMKRYKECQAVLQKAVSTNPGFRPAAVFLQKLERIPAL
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
RG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA