| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355338
Identifier: 78355338
GI number: 78355338
Start: 279771
End: 282296
Strand: Reverse
Name: 78355338
Synonym: Dde_0291
Alternate gene names: NA
Gene position: 282296-279771 (Counterclockwise)
Preceding gene: 78355339
Following gene: 78355336
Centisome position: 7.57
GC content: 59.9
Gene sequence:
>2526_bases ATGGAATATCCAGTCTGGTGGACGCCCTTTCTGAGCGGCGGCCTCGTTATTGCCATCATCGCCATCGTCCATGTTTTCAT CGCCCACTTCGCGGTAGGCGGCGGCTTTTATCTGGTACTGACAGAAATGAAAGCCGTGCGCGAAAAATCAGACCACATTC TGGACCATGTACGCAGCCACACCAGATTCTTTCTGCTTACCACCATGGTGGCCGGCGGGCTGACCGGCGTCGGTATCTGG TTCACCATCAGCGTGCTTTCACCCACCGTCACCAGCACGCTCACACATTCGTTCGCTTTCGGGTGGGCGGCGGAATGGGC GTTCTTCCTCGGAGAAATCGCCGCGCTTCTGGTTTATCACTATTATTTCGACTCCATGCCCCGCAAAGCGCACATCAAGG TGGGCTGGGTGTATGCCTTTTTCGCGTTCATGTCGCTTGTGGTCATCAACGGCATCATCACTGTCATGCTCACGCCGGGC AAATGGGCGCAGACACATCTTTTCTGGGACGGTTTCTTCAACGTATCTTTCTGGCCTTCGCTCAGTCTGCGTTTTGCCTT GTGCCTCATGTTTGCAGGGCTGTTCGCTTTTGTGACGGCCATACGCATTCCGCACGAGGAAACCCGCGAACGCATGGTGC GGCGCGCCGCCATGTGGGTTGGACTGCCTTTTGCCGCTGCCGCGCTTTCGGGCATCTGGTATCTGCTCATCCTGCCCGAC CCGCAGCAGTCCATGGTCATGGAACGTTCCACCCAGACTCCGCATCTGGTACAGGCGTTCATTCCGCTGGGCATTGTCAT ACTGGTGCTCAGTCTTGCCATTGCATGGTTCAGACCGCTTTCTGTCCGCCGGCCGCTGGTATGGCTGGTGCTGGCGCTGG GACTGGCCCAGATCGGCGTTTTTGAATGGGTGCGCGAAGCCGGCAGAAGACCATACCTGCTGTACGGGCACACCTATTCC AGTTCCATCCGCGTGGAGGATGTGCCCCGTGTGCTCAGCGAGGGTATTCTGAAAACAGCCCGCTGGACTCATATAAAGGA AATCACAGAAGATAACGTGCTGGAAGCCGGCAAGGAAATATACAAACTGCAGTGTATGACCTGTCACGGCATAACCGGCC CCATGCTGAGCATACTGGATAAAACAGAAAAATTCAGTGTGTACGGCATGGATTCGCAGCTTGACGGACAGGGCAAGCTG CGGCTGCACATGCCGCCATTTCTCGGCACAGTGGAAGAACGCCGGGCTCTGGCCGCCTATATAGTCACGGGCCTGCACGG ACGCACGGACGAAACAGCACCACCGGCCATACGCACCCTGCAGACCGCCATTCCCTCGTTTGACAGAGAAACGGCGCCCT ATGTGCTGCTGGCATGGAGCACCAGAGGCATGCACAGCGTGGTGGAAGACGGCGCCCTGAATCTTGCTCCCGCCGGCAGC GACCTGCGGTGTCAGCTTGTGCGCCGCGACTCCACGCCGGAGATAATAACTTCGGGTGTGACCATAACCTACCGGCCCGA AGACGGGCACGGCCCGCAGGGCACCTTTGCCGCCAACGATGACATGCGTGCCCACGAGGCGCTTAATGTGGCCGTAACCC CCTATCCGCAGCCGGACACCTTCAATCCGTATCCGGTATACATAGTGGAGGCACGCGACGAAGCCACCGGCGCGCTGCTG GCGGTAACCAAAACCGTGGTGGCAGCTTCCGGCGAAGTGGCCTGCAACAGATGCCACGGCGGCCAGTGGGCCGTGGAAGA CATGTCCGGCATCAGCAAGGCTACTCAGAATGACATATTCGCCGTACACGACAAAATTCAGGGGACCGATTTCACCGCAC AGGCAGCCGCCGGCGAGGTCATCCGCTGCCAGTCGTGCCACGACGGCAACAGCGACATTCCGGAATTCTCCGCCGCCATT CACGGCTGGCACGCCAGCTATCTGACCGGGCGCGACGCCGATGCGTGCAACGGCTGCCATCCTTCGGCACCGGACGGGGC CACGCAGAGTTTCAGAGGCATCCACAACATGATGGGGCTTACCTGCACCAACTGCCACGGCCACATGGAAGACCACGCCA TAGGTCTGCTGCGCAACGAAATCGAGCAGGAACGCTACGCCGCGCGCGCACTGATGGAACCGCTCAAGCCGCAACAGGCG GCATCGGCCGCCGAGATTCCCCCCCGCGAGGCATGGACGCAACTGCCCCACTGCTCCACCTGCCACGATTTCATGCAGTC TCCGCCGCCGGACCCCAGCGCCTTCGGCCAGTGGACGGCATCGTCCGCCGACCTGTTCAGCAACGGGCACGACTACATGG CAGCCATGATGTGTCAGGCATGCCACGGCGCAACCCATGCCGTGTATATGGCCGACAACGCATGGGGCGGCATGGAGCGC GACAACATACAGCCCCTGCAGTATCAGCAGATGGCAGGACCCGTAGGCGGGGCCAACAACTGCGGCGTGTGCCACACGCG TGAACTGGATATGTCAGAATCGGCACATCACCCCATTCCGCAGTAA
Upstream 100 bases:
>100_bases GCTCACCGGAGCCCTGATGGTCTGGGTATTGCGGCTGGCTCTCAACGGCCGCAGACAGCACGGCAATGCCACCGCCAACG GTACGGAAGGAGAAGGATAA
Downstream 100 bases:
>100_bases CCGCATAACAAACCACTACGAAAAACGCCCCGACCTGCACCGTCGGGGCGTTTTCTGTATGGAGTTCCGGCACAACGCTG CCGGATTCCAAGGGAGGAGG
Product: cytochrome bd-type quinol oxidase subunit 1-like
Products: NA
Alternate protein names: Cytochrome C Class I; Cytochrome Bd-Type Quinol Oxidase Subunit 1-Like Protein; Cytochrome; Cytochrome Bd Ubiquinol Oxidase Subunit I; Cytochrome C Class III; Cytochrome Bd-Type Quinol Oxidase Subunit 1-Like
Number of amino acids: Translated: 841; Mature: 841
Protein sequence:
>841_residues MEYPVWWTPFLSGGLVIAIIAIVHVFIAHFAVGGGFYLVLTEMKAVREKSDHILDHVRSHTRFFLLTTMVAGGLTGVGIW FTISVLSPTVTSTLTHSFAFGWAAEWAFFLGEIAALLVYHYYFDSMPRKAHIKVGWVYAFFAFMSLVVINGIITVMLTPG KWAQTHLFWDGFFNVSFWPSLSLRFALCLMFAGLFAFVTAIRIPHEETRERMVRRAAMWVGLPFAAAALSGIWYLLILPD PQQSMVMERSTQTPHLVQAFIPLGIVILVLSLAIAWFRPLSVRRPLVWLVLALGLAQIGVFEWVREAGRRPYLLYGHTYS SSIRVEDVPRVLSEGILKTARWTHIKEITEDNVLEAGKEIYKLQCMTCHGITGPMLSILDKTEKFSVYGMDSQLDGQGKL RLHMPPFLGTVEERRALAAYIVTGLHGRTDETAPPAIRTLQTAIPSFDRETAPYVLLAWSTRGMHSVVEDGALNLAPAGS DLRCQLVRRDSTPEIITSGVTITYRPEDGHGPQGTFAANDDMRAHEALNVAVTPYPQPDTFNPYPVYIVEARDEATGALL AVTKTVVAASGEVACNRCHGGQWAVEDMSGISKATQNDIFAVHDKIQGTDFTAQAAAGEVIRCQSCHDGNSDIPEFSAAI HGWHASYLTGRDADACNGCHPSAPDGATQSFRGIHNMMGLTCTNCHGHMEDHAIGLLRNEIEQERYAARALMEPLKPQQA ASAAEIPPREAWTQLPHCSTCHDFMQSPPPDPSAFGQWTASSADLFSNGHDYMAAMMCQACHGATHAVYMADNAWGGMER DNIQPLQYQQMAGPVGGANNCGVCHTRELDMSESAHHPIPQ
Sequences:
>Translated_841_residues MEYPVWWTPFLSGGLVIAIIAIVHVFIAHFAVGGGFYLVLTEMKAVREKSDHILDHVRSHTRFFLLTTMVAGGLTGVGIW FTISVLSPTVTSTLTHSFAFGWAAEWAFFLGEIAALLVYHYYFDSMPRKAHIKVGWVYAFFAFMSLVVINGIITVMLTPG KWAQTHLFWDGFFNVSFWPSLSLRFALCLMFAGLFAFVTAIRIPHEETRERMVRRAAMWVGLPFAAAALSGIWYLLILPD PQQSMVMERSTQTPHLVQAFIPLGIVILVLSLAIAWFRPLSVRRPLVWLVLALGLAQIGVFEWVREAGRRPYLLYGHTYS SSIRVEDVPRVLSEGILKTARWTHIKEITEDNVLEAGKEIYKLQCMTCHGITGPMLSILDKTEKFSVYGMDSQLDGQGKL RLHMPPFLGTVEERRALAAYIVTGLHGRTDETAPPAIRTLQTAIPSFDRETAPYVLLAWSTRGMHSVVEDGALNLAPAGS DLRCQLVRRDSTPEIITSGVTITYRPEDGHGPQGTFAANDDMRAHEALNVAVTPYPQPDTFNPYPVYIVEARDEATGALL AVTKTVVAASGEVACNRCHGGQWAVEDMSGISKATQNDIFAVHDKIQGTDFTAQAAAGEVIRCQSCHDGNSDIPEFSAAI HGWHASYLTGRDADACNGCHPSAPDGATQSFRGIHNMMGLTCTNCHGHMEDHAIGLLRNEIEQERYAARALMEPLKPQQA ASAAEIPPREAWTQLPHCSTCHDFMQSPPPDPSAFGQWTASSADLFSNGHDYMAAMMCQACHGATHAVYMADNAWGGMER DNIQPLQYQQMAGPVGGANNCGVCHTRELDMSESAHHPIPQ >Mature_841_residues MEYPVWWTPFLSGGLVIAIIAIVHVFIAHFAVGGGFYLVLTEMKAVREKSDHILDHVRSHTRFFLLTTMVAGGLTGVGIW FTISVLSPTVTSTLTHSFAFGWAAEWAFFLGEIAALLVYHYYFDSMPRKAHIKVGWVYAFFAFMSLVVINGIITVMLTPG KWAQTHLFWDGFFNVSFWPSLSLRFALCLMFAGLFAFVTAIRIPHEETRERMVRRAAMWVGLPFAAAALSGIWYLLILPD PQQSMVMERSTQTPHLVQAFIPLGIVILVLSLAIAWFRPLSVRRPLVWLVLALGLAQIGVFEWVREAGRRPYLLYGHTYS SSIRVEDVPRVLSEGILKTARWTHIKEITEDNVLEAGKEIYKLQCMTCHGITGPMLSILDKTEKFSVYGMDSQLDGQGKL RLHMPPFLGTVEERRALAAYIVTGLHGRTDETAPPAIRTLQTAIPSFDRETAPYVLLAWSTRGMHSVVEDGALNLAPAGS DLRCQLVRRDSTPEIITSGVTITYRPEDGHGPQGTFAANDDMRAHEALNVAVTPYPQPDTFNPYPVYIVEARDEATGALL AVTKTVVAASGEVACNRCHGGQWAVEDMSGISKATQNDIFAVHDKIQGTDFTAQAAAGEVIRCQSCHDGNSDIPEFSAAI HGWHASYLTGRDADACNGCHPSAPDGATQSFRGIHNMMGLTCTNCHGHMEDHAIGLLRNEIEQERYAARALMEPLKPQQA ASAAEIPPREAWTQLPHCSTCHDFMQSPPPDPSAFGQWTASSADLFSNGHDYMAAMMCQACHGATHAVYMADNAWGGMER DNIQPLQYQQMAGPVGGANNCGVCHTRELDMSESAHHPIPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92714; Mature: 92714
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYPVWWTPFLSGGLVIAIIAIVHVFIAHFAVGGGFYLVLTEMKAVREKSDHILDHVRSH CCCCCEECHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHH TRFFLLTTMVAGGLTGVGIWFTISVLSPTVTSTLTHSFAFGWAAEWAFFLGEIAALLVYH HHHHHHHHHHHCCCCCEEHEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YYFDSMPRKAHIKVGWVYAFFAFMSLVVINGIITVMLTPGKWAQTHLFWDGFFNVSFWPS HHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEEECCCCEEECCC LSLRFALCLMFAGLFAFVTAIRIPHEETRERMVRRAAMWVGLPFAAAALSGIWYLLILPD HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEEEECC PQQSMVMERSTQTPHLVQAFIPLGIVILVLSLAIAWFRPLSVRRPLVWLVLALGLAQIGV CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHH FEWVREAGRRPYLLYGHTYSSSIRVEDVPRVLSEGILKTARWTHIKEITEDNVLEAGKEI HHHHHHHCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YKLQCMTCHGITGPMLSILDKTEKFSVYGMDSQLDGQGKLRLHMPPFLGTVEERRALAAY HEEEEEEECCCCHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCCHHCCHHHHHHHHHH IVTGLHGRTDETAPPAIRTLQTAIPSFDRETAPYVLLAWSTRGMHSVVEDGALNLAPAGS HHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHCCCCEECCCCC DLRCQLVRRDSTPEIITSGVTITYRPEDGHGPQGTFAANDDMRAHEALNVAVTPYPQPDT CCEEEEEECCCCCCCEECCEEEEECCCCCCCCCCCCCCCCCCHHHHHEEEEECCCCCCCC FNPYPVYIVEARDEATGALLAVTKTVVAASGEVACNRCHGGQWAVEDMSGISKATQNDIF CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCEEHHHHHHHHHHHCCCEE AVHDKIQGTDFTAQAAAGEVIRCQSCHDGNSDIPEFSAAIHGWHASYLTGRDADACNGCH EEECCCCCCCCCHHHCCCCEEEEECCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCCC PSAPDGATQSFRGIHNMMGLTCTNCHGHMEDHAIGLLRNEIEQERYAARALMEPLKPQQA CCCCCCHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH ASAAEIPPREAWTQLPHCSTCHDFMQSPPPDPSAFGQWTASSADLFSNGHDYMAAMMCQA CCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHH CHGATHAVYMADNAWGGMERDNIQPLQYQQMAGPVGGANNCGVCHTRELDMSESAHHPIP HCCCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCC Q C >Mature Secondary Structure MEYPVWWTPFLSGGLVIAIIAIVHVFIAHFAVGGGFYLVLTEMKAVREKSDHILDHVRSH CCCCCEECHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHH TRFFLLTTMVAGGLTGVGIWFTISVLSPTVTSTLTHSFAFGWAAEWAFFLGEIAALLVYH HHHHHHHHHHHCCCCCEEHEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YYFDSMPRKAHIKVGWVYAFFAFMSLVVINGIITVMLTPGKWAQTHLFWDGFFNVSFWPS HHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEEECCCCEEECCC LSLRFALCLMFAGLFAFVTAIRIPHEETRERMVRRAAMWVGLPFAAAALSGIWYLLILPD HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEEEECC PQQSMVMERSTQTPHLVQAFIPLGIVILVLSLAIAWFRPLSVRRPLVWLVLALGLAQIGV CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHH FEWVREAGRRPYLLYGHTYSSSIRVEDVPRVLSEGILKTARWTHIKEITEDNVLEAGKEI HHHHHHHCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YKLQCMTCHGITGPMLSILDKTEKFSVYGMDSQLDGQGKLRLHMPPFLGTVEERRALAAY HEEEEEEECCCCHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCCHHCCHHHHHHHHHH IVTGLHGRTDETAPPAIRTLQTAIPSFDRETAPYVLLAWSTRGMHSVVEDGALNLAPAGS HHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHCCCCEECCCCC DLRCQLVRRDSTPEIITSGVTITYRPEDGHGPQGTFAANDDMRAHEALNVAVTPYPQPDT CCEEEEEECCCCCCCEECCEEEEECCCCCCCCCCCCCCCCCCHHHHHEEEEECCCCCCCC FNPYPVYIVEARDEATGALLAVTKTVVAASGEVACNRCHGGQWAVEDMSGISKATQNDIF CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCEEHHHHHHHHHHHCCCEE AVHDKIQGTDFTAQAAAGEVIRCQSCHDGNSDIPEFSAAIHGWHASYLTGRDADACNGCH EEECCCCCCCCCHHHCCCCEEEEECCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCCC PSAPDGATQSFRGIHNMMGLTCTNCHGHMEDHAIGLLRNEIEQERYAARALMEPLKPQQA CCCCCCHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH ASAAEIPPREAWTQLPHCSTCHDFMQSPPPDPSAFGQWTASSADLFSNGHDYMAAMMCQA CCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHH CHGATHAVYMADNAWGGMERDNIQPLQYQQMAGPVGGANNCGVCHTRELDMSESAHHPIP HCCCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCC Q C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA