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The map label for this gene is rpfG [H]

Identifier: 78355310

GI number: 78355310

Start: 247395

End: 249134

Strand: Reverse

Name: rpfG [H]

Synonym: Dde_0263

Alternate gene names: 78355310

Gene position: 249134-247395 (Counterclockwise)

Preceding gene: 78355311

Following gene: 78355304

Centisome position: 6.68

GC content: 62.82

Gene sequence:

>1740_bases
TTGCGGCACCCCCCTCATGCTGCGTCACCGCTTTGTCATCATTCCTTCACACACACGGCACACGGCCCCCTCACAACCTG
CTACAACCACGTGCGTCCGCCGCGCCGCGGACACCATTCAGGGGGAAACATGGCTGATTCATGCAGCGGTTACACAGAAA
AACATGCCCTGCCCGCAGGGATACTCCGCGCATGGCCGGTCATCAGCGCTCCGGTACGGCAGCGGCTGCAACTGCCCCTT
GCAGGGGCAATATACTTTGTGGCGGTGCTCTGCGGGCTGCAGTCGGGAATCGCCTGCGGTCTGCCGCCCTCCATCCATCC
CGCCGCCGGCTTCGGATTTGCCATGCTGACCCTGAGGGGAGGCACCATGCTGCCTGTGCTCATGCTGGCCGATTTCTGCG
CGGGCATGACGGCTCTGCCACCGCTGCCCGCGCTGGCGCTGGCCGCAGGCAACACCGCGGGCATCGCACTGGCATGGCAG
CTCATGCAGGCCAAGGCCCCGCAGGTACGTATTTTCGACCTGCCGCGCCATGCCGTTCTGTTCATCTGCGCAGCTCCGCT
GGTTCAAAGCGTCACCGCGGCCACGGCAGGCACCTTCAGTCTGACACTTGCAGGCATCGTGCACCACTCGCAGGCTTCGA
CCGTATGGGGTGCATGGACTCTTGCCCAGGGTGCGGGCTTCATTCTTTCGGGCATGGCCGCTCTGGCATGGACACGTCCT
GCACCGCCCGATGCCGCAACACCGGACAGGCGGCGTCTGTTAAAAGCTTCGGGAGCAGCACTGCTGCTGTGTCTGCTGGT
ACTGGGGCCGCATCCGCTGCCGGATTCACTGCGTTATCTGCTGCTGTTCATCATCATCCCCGCCACGGCATGGGCCGGAT
TCAAACTGCCGCCCGCGCATCTTTCATCCCTGCTGCTGGCCGGCGGCACACTGGGGGCATGGCTTACCCACGCTGACCAC
GGCGTACTGAGCACCCTGCCCGCCCCGCTGCCGTTCGTACTGCTGCAGGGCGCCATGCTGCTGCTAAGCGCCATGGCGCT
GATGACGCAGGTGCTGGCCACCACCAACAGGCACATGCGCCGCTCGCTTTCCACCACGCAGGATGCCGCGCTCTTCAGTC
TGGCATCACTGGCGGAAACACGCGACAATGAAACAGGCGCCCACATAATGCGTACACAGGCGTATGTCCGCGTGCTGGCC
CGGCAGTTGCGCACACATGTGCGCTTCCGTTCCGTACTTACCCCCGAAGGCATTGAACAGCTGTGCAAATCCGCCCCGCT
GCACGACATCGGCAAAGTAGGCGTGCCCGACGCCATCCTGCGCAAACAGGGGCCTCTGACCCCGCAGGAAATGGATCAGA
TAAAGCTGCACACCGTATACGGGCGTGATGCTCTGCGCCACGCTTCCATGAGACTGGGCGGCAGTTCTTTTCTGCAGATG
GCGGAAGAACTGGTGCACACGCACCATGAATGCTGGGACGGCACGGGATATCCGCAGCAGCTGACAGGAGAGCAGATACC
CGTGGCAGGCAGACTTATGGCGCTTGCCGATGTCTATGACGCACTTATAAGCCGCCGCTGCTACAAAAAGCCCGTTCCGC
ACCATCAGGCACGCGAGATCATACTCAAAGGACGCGGCACACGTTTTGACCCCGCCGTGGTTGATGCCTTTCTGCGGGCG
GAGCATGACTTCCTAGCCATTGCCGCCGCCTTCAGAGACGAGCCTGATACCTGCACCTGA

Upstream 100 bases:

>100_bases
AGTACGACCGCAAGCCGGAGCTTTTCCGCGCACTCCGCGCCCGCTACGCCCCGCCGCGCAAACACCGTTCCGGCCGCTGA
ATCCCCCGCCTTTCCGCCTG

Downstream 100 bases:

>100_bases
AACGCCGCGGCACACGAGCCGCCGCATCCGCTCCTGCCGTGCGTGCAATAAAAAAAACCGGCGCACCGCACACGGTGCAC
CGGCCTGAATCCGTTTTCTG

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MRHPPHAASPLCHHSFTHTAHGPLTTCYNHVRPPRRGHHSGGNMADSCSGYTEKHALPAGILRAWPVISAPVRQRLQLPL
AGAIYFVAVLCGLQSGIACGLPPSIHPAAGFGFAMLTLRGGTMLPVLMLADFCAGMTALPPLPALALAAGNTAGIALAWQ
LMQAKAPQVRIFDLPRHAVLFICAAPLVQSVTAATAGTFSLTLAGIVHHSQASTVWGAWTLAQGAGFILSGMAALAWTRP
APPDAATPDRRRLLKASGAALLLCLLVLGPHPLPDSLRYLLLFIIIPATAWAGFKLPPAHLSSLLLAGGTLGAWLTHADH
GVLSTLPAPLPFVLLQGAMLLLSAMALMTQVLATTNRHMRRSLSTTQDAALFSLASLAETRDNETGAHIMRTQAYVRVLA
RQLRTHVRFRSVLTPEGIEQLCKSAPLHDIGKVGVPDAILRKQGPLTPQEMDQIKLHTVYGRDALRHASMRLGGSSFLQM
AEELVHTHHECWDGTGYPQQLTGEQIPVAGRLMALADVYDALISRRCYKKPVPHHQAREIILKGRGTRFDPAVVDAFLRA
EHDFLAIAAAFRDEPDTCT

Sequences:

>Translated_579_residues
MRHPPHAASPLCHHSFTHTAHGPLTTCYNHVRPPRRGHHSGGNMADSCSGYTEKHALPAGILRAWPVISAPVRQRLQLPL
AGAIYFVAVLCGLQSGIACGLPPSIHPAAGFGFAMLTLRGGTMLPVLMLADFCAGMTALPPLPALALAAGNTAGIALAWQ
LMQAKAPQVRIFDLPRHAVLFICAAPLVQSVTAATAGTFSLTLAGIVHHSQASTVWGAWTLAQGAGFILSGMAALAWTRP
APPDAATPDRRRLLKASGAALLLCLLVLGPHPLPDSLRYLLLFIIIPATAWAGFKLPPAHLSSLLLAGGTLGAWLTHADH
GVLSTLPAPLPFVLLQGAMLLLSAMALMTQVLATTNRHMRRSLSTTQDAALFSLASLAETRDNETGAHIMRTQAYVRVLA
RQLRTHVRFRSVLTPEGIEQLCKSAPLHDIGKVGVPDAILRKQGPLTPQEMDQIKLHTVYGRDALRHASMRLGGSSFLQM
AEELVHTHHECWDGTGYPQQLTGEQIPVAGRLMALADVYDALISRRCYKKPVPHHQAREIILKGRGTRFDPAVVDAFLRA
EHDFLAIAAAFRDEPDTCT
>Mature_579_residues
MRHPPHAASPLCHHSFTHTAHGPLTTCYNHVRPPRRGHHSGGNMADSCSGYTEKHALPAGILRAWPVISAPVRQRLQLPL
AGAIYFVAVLCGLQSGIACGLPPSIHPAAGFGFAMLTLRGGTMLPVLMLADFCAGMTALPPLPALALAAGNTAGIALAWQ
LMQAKAPQVRIFDLPRHAVLFICAAPLVQSVTAATAGTFSLTLAGIVHHSQASTVWGAWTLAQGAGFILSGMAALAWTRP
APPDAATPDRRRLLKASGAALLLCLLVLGPHPLPDSLRYLLLFIIIPATAWAGFKLPPAHLSSLLLAGGTLGAWLTHADH
GVLSTLPAPLPFVLLQGAMLLLSAMALMTQVLATTNRHMRRSLSTTQDAALFSLASLAETRDNETGAHIMRTQAYVRVLA
RQLRTHVRFRSVLTPEGIEQLCKSAPLHDIGKVGVPDAILRKQGPLTPQEMDQIKLHTVYGRDALRHASMRLGGSSFLQM
AEELVHTHHECWDGTGYPQQLTGEQIPVAGRLMALADVYDALISRRCYKKPVPHHQAREIILKGRGTRFDPAVVDAFLRA
EHDFLAIAAAFRDEPDTCT

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG3437

COG function: function code KT; Response regulator containing a CheY-like receiver domain and an HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 62122; Mature: 62122

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHPPHAASPLCHHSFTHTAHGPLTTCYNHVRPPRRGHHSGGNMADSCSGYTEKHALPAG
CCCCCCCCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHCCCCHHHHCCCHH
ILRAWPVISAPVRQRLQLPLAGAIYFVAVLCGLQSGIACGLPPSIHPAAGFGFAMLTLRG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHEEECC
GTMLPVLMLADFCAGMTALPPLPALALAAGNTAGIALAWQLMQAKAPQVRIFDLPRHAVL
CCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHH
FICAAPLVQSVTAATAGTFSLTLAGIVHHSQASTVWGAWTLAQGAGFILSGMAALAWTRP
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCC
APPDAATPDRRRLLKASGAALLLCLLVLGPHPLPDSLRYLLLFIIIPATAWAGFKLPPAH
CCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH
LSSLLLAGGTLGAWLTHADHGVLSTLPAPLPFVLLQGAMLLLSAMALMTQVLATTNRHMR
HHHHHHHCCHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSLSTTQDAALFSLASLAETRDNETGAHIMRTQAYVRVLARQLRTHVRFRSVLTPEGIEQ
HHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LCKSAPLHDIGKVGVPDAILRKQGPLTPQEMDQIKLHTVYGRDALRHASMRLGGSSFLQM
HHHCCCCHHHCCCCCCHHHHHCCCCCCHHHHHHEEEEEECCHHHHHHHHHHCCHHHHHHH
AEELVHTHHECWDGTGYPQQLTGEQIPVAGRLMALADVYDALISRRCYKKPVPHHQAREI
HHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ILKGRGTRFDPAVVDAFLRAEHDFLAIAAAFRDEPDTCT
HHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRHPPHAASPLCHHSFTHTAHGPLTTCYNHVRPPRRGHHSGGNMADSCSGYTEKHALPAG
CCCCCCCCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHCCCCHHHHCCCHH
ILRAWPVISAPVRQRLQLPLAGAIYFVAVLCGLQSGIACGLPPSIHPAAGFGFAMLTLRG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHEEECC
GTMLPVLMLADFCAGMTALPPLPALALAAGNTAGIALAWQLMQAKAPQVRIFDLPRHAVL
CCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHH
FICAAPLVQSVTAATAGTFSLTLAGIVHHSQASTVWGAWTLAQGAGFILSGMAALAWTRP
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCC
APPDAATPDRRRLLKASGAALLLCLLVLGPHPLPDSLRYLLLFIIIPATAWAGFKLPPAH
CCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH
LSSLLLAGGTLGAWLTHADHGVLSTLPAPLPFVLLQGAMLLLSAMALMTQVLATTNRHMR
HHHHHHHCCHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSLSTTQDAALFSLASLAETRDNETGAHIMRTQAYVRVLARQLRTHVRFRSVLTPEGIEQ
HHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LCKSAPLHDIGKVGVPDAILRKQGPLTPQEMDQIKLHTVYGRDALRHASMRLGGSSFLQM
HHHCCCCHHHCCCCCCHHHHHCCCCCCHHHHHHEEEEEECCHHHHHHHHHHCCHHHHHHH
AEELVHTHHECWDGTGYPQQLTGEQIPVAGRLMALADVYDALISRRCYKKPVPHHQAREI
HHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ILKGRGTRFDPAVVDAFLRAEHDFLAIAAAFRDEPDTCT
HHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]