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The map label for this gene is rrf2 [H]

Identifier: 78355271

GI number: 78355271

Start: 206952

End: 207551

Strand: Reverse

Name: rrf2 [H]

Synonym: Dde_0224

Alternate gene names: 78355271

Gene position: 207551-206952 (Counterclockwise)

Preceding gene: 78355272

Following gene: 78355270

Centisome position: 5.56

GC content: 63.0

Gene sequence:

>600_bases
ATGCGCATTTCTGCATCGTCACACTACGCATCGAGAATTCTCGTCATGCTTACACGCCATGCCGACGAAGCCCCCATTCC
TGCAGCCGCTCTGGCAGATCGTTCCGGTATCTCCATCAAGTTTGTGGAAAAGCTCATCCGCCCGCTGAAGCAGGCCGGTC
TGGTGGAAAGTGTCCGCGGCGCCACCGGCGGTCACATGCTGGCCATGCGCCCTGAACAGATCAGTCTGGGCGATGTGGTA
CGCGCCATGGAAGGCGGCATAGACCTGACACACTGCTGCGACGATCCGGAACGCTGCCGTTCCAAGGAATCGTGCCGTAC
CCGCCAGATGTGGTCAGGCGTCAGCCGCGCCCTTGAACGCACACTGGACGCCATAACCCTGCTGGACCTGCTGAACGACC
CCGCCCCCGAATGCACCAGCCTGCCCGAACCGCCCCAGAAAAACAGCCGCCCCGCCAAAGCACAGCAGGCGGAATCCGGT
CCGCATACCGGCCGCGAAAAGCTGCTTTCTTCCCGCGGGATGAACACCGGGCGCTGCTGCGACACGCTGCTTACCGCCAA
GGGGCAATGCTCATGCAGCCACGGCTGCCCTGCCCCGTAG

Upstream 100 bases:

>100_bases
TGCTTAATCCAGACTGTATTAATCTAGATAAATTAAATCCGCTTTACACAATCCACGCCGCCGTCCGCGATGCCGGCATG
GATGGAACCGGGAGAGACAC

Downstream 100 bases:

>100_bases
CGGAACAACCATAAGGAAACGCTCGCCCGCCTTTTCCGCCGGGCGTTCGACAACGCCCACGGATATCCGGGGGCCGGAAG
GATACCCGCCGCTCCATTTT

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MRISASSHYASRILVMLTRHADEAPIPAAALADRSGISIKFVEKLIRPLKQAGLVESVRGATGGHMLAMRPEQISLGDVV
RAMEGGIDLTHCCDDPERCRSKESCRTRQMWSGVSRALERTLDAITLLDLLNDPAPECTSLPEPPQKNSRPAKAQQAESG
PHTGREKLLSSRGMNTGRCCDTLLTAKGQCSCSHGCPAP

Sequences:

>Translated_199_residues
MRISASSHYASRILVMLTRHADEAPIPAAALADRSGISIKFVEKLIRPLKQAGLVESVRGATGGHMLAMRPEQISLGDVV
RAMEGGIDLTHCCDDPERCRSKESCRTRQMWSGVSRALERTLDAITLLDLLNDPAPECTSLPEPPQKNSRPAKAQQAESG
PHTGREKLLSSRGMNTGRCCDTLLTAKGQCSCSHGCPAP
>Mature_199_residues
MRISASSHYASRILVMLTRHADEAPIPAAALADRSGISIKFVEKLIRPLKQAGLVESVRGATGGHMLAMRPEQISLGDVV
RAMEGGIDLTHCCDDPERCRSKESCRTRQMWSGVSRALERTLDAITLLDLLNDPAPECTSLPEPPQKNSRPAKAQQAESG
PHTGREKLLSSRGMNTGRCCDTLLTAKGQCSCSHGCPAP

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=133, Percent_Identity=32.3308270676692, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1790621, Length=136, Percent_Identity=30.1470588235294, Blast_Score=61, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 21443; Mature: 21443

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRISASSHYASRILVMLTRHADEAPIPAAALADRSGISIKFVEKLIRPLKQAGLVESVRG
CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
ATGGHMLAMRPEQISLGDVVRAMEGGIDLTHCCDDPERCRSKESCRTRQMWSGVSRALER
CCCCCEEEECCCCCCHHHHHHHHHCCCCCHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHH
TLDAITLLDLLNDPAPECTSLPEPPQKNSRPAKAQQAESGPHTGREKLLSSRGMNTGRCC
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCCCHHHH
DTLLTAKGQCSCSHGCPAP
HHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRISASSHYASRILVMLTRHADEAPIPAAALADRSGISIKFVEKLIRPLKQAGLVESVRG
CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
ATGGHMLAMRPEQISLGDVVRAMEGGIDLTHCCDDPERCRSKESCRTRQMWSGVSRALER
CCCCCEEEECCCCCCHHHHHHHHHCCCCCHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHH
TLDAITLLDLLNDPAPECTSLPEPPQKNSRPAKAQQAESGPHTGREKLLSSRGMNTGRCC
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCCCHHHH
DTLLTAKGQCSCSHGCPAP
HHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8335628 [H]