| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is phoB [C]
Identifier: 78355268
GI number: 78355268
Start: 204423
End: 204779
Strand: Reverse
Name: phoB [C]
Synonym: Dde_0221
Alternate gene names: 78355268
Gene position: 204779-204423 (Counterclockwise)
Preceding gene: 78355269
Following gene: 78355261
Centisome position: 5.49
GC content: 61.34
Gene sequence:
>357_bases ATGAGCAAGCGAATTCTTGTTGTGGACTGCAACACCGAAGAACGCCGGTCTCTTTGCGATGTGCTTTCCGCCAACGGGTA TCAGGTGACCGTCACCGCGTGCACCCGCGAAGGGCTGGATGTCATACGCACACAAAAGCCGGATCTCGTGGCGCTGGAAA TGGACATGCCCAGCCCCGGCGGAACCATTTTTTATGCCCGCATGCGGCGCGACCCTGAACTGCGACATACTCCGGTGGTC GTGGTGAGCAGCGTGGGACCGCGTCCCGCCGCCCTGCGCAAAGGGGTACCCGTGGTGCAGAGACCGGCTGCAACCGGTGT TCTGCTGGATACCGTATCCCGTGCCATGGCTGTGTGA
Upstream 100 bases:
>100_bases ACTCCGGCGGCTGCCTGATTCTGCCCGCAGAACAACCAACCCCCGCCGTCCTGAGCGACGGCGGGGGTTTTAACCAGCAT GCCTTGTGAAGGAAATAACA
Downstream 100 bases:
>100_bases TACCGGCCCCGCGGCAGAACAGCTCTGCAAAGCAGTCTGCCCGTCAACCGTTACAGCATCGCAGGCGAGTCCGGCATGCG GCCCGTACAGCCGCAGCCGC
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: Response Regulator Receiver Domain-Containing Protein; Response Regulator
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MSKRILVVDCNTEERRSLCDVLSANGYQVTVTACTREGLDVIRTQKPDLVALEMDMPSPGGTIFYARMRRDPELRHTPVV VVSSVGPRPAALRKGVPVVQRPAATGVLLDTVSRAMAV
Sequences:
>Translated_118_residues MSKRILVVDCNTEERRSLCDVLSANGYQVTVTACTREGLDVIRTQKPDLVALEMDMPSPGGTIFYARMRRDPELRHTPVV VVSSVGPRPAALRKGVPVVQRPAATGVLLDTVSRAMAV >Mature_117_residues SKRILVVDCNTEERRSLCDVLSANGYQVTVTACTREGLDVIRTQKPDLVALEMDMPSPGGTIFYARMRRDPELRHTPVVV VSSVGPRPAALRKGVPVVQRPAATGVLLDTVSRAMAV
Specific function: This Protein Is A Positive Regulator For The Phosphate Regulon. Transcription Of This Operon Is Positively Regulated By Phob And Phor When Phosphate Is Limited. [C]
COG id: COG2197
COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12832; Mature: 12701
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRILVVDCNTEERRSLCDVLSANGYQVTVTACTREGLDVIRTQKPDLVALEMDMPSPG CCCCEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCEECCCCCCEEEEEECCCCCC GTIFYARMRRDPELRHTPVVVVSSVGPRPAALRKGVPVVQRPAATGVLLDTVSRAMAV CEEEEEEECCCCCCCCCCEEEEECCCCCCHHHHCCCCCEECCCCCCHHHHHHHHHHCC >Mature Secondary Structure SKRILVVDCNTEERRSLCDVLSANGYQVTVTACTREGLDVIRTQKPDLVALEMDMPSPG CCCEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCEECCCCCCEEEEEECCCCCC GTIFYARMRRDPELRHTPVVVVSSVGPRPAALRKGVPVVQRPAATGVLLDTVSRAMAV CEEEEEEECCCCCCCCCCEEEEECCCCCCHHHHCCCCCEECCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA