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The map label for this gene is yaeJ [C]

Identifier: 78355249

GI number: 78355249

Start: 183434

End: 183865

Strand: Reverse

Name: yaeJ [C]

Synonym: Dde_0202

Alternate gene names: 78355249

Gene position: 183865-183434 (Counterclockwise)

Preceding gene: 78355250

Following gene: 78355244

Centisome position: 4.93

GC content: 58.56

Gene sequence:

>432_bases
ATGCTTGAAGTACAGCTGGATGACGGCACCAGCCTTGTCATCCCCGAAGATGAAATATCGTTCAGTGCCTCGCGGGGGTC
AGGTCCCGGCGGTCAGCATGTCAACGTGACCGCCAGCAGGGTCACCGTACGCTTCAACGTTCTGCACTCCGCTGTCCTTG
ACCGGCGGCAAAAGGAACGTATTGCCTCGCGGCTTGCTTCGCGCATTTCGTCCGCCGGCGAACTGGCCGTTTCCTGCGCG
GACGGACGCAGTCAGCATGCCAACCGCAGAACGGCCTTGCAACGCCTGGCAGCCCTGCTTACCCATGCGCTGCACACCCC
AAGGCCCAGAACAAAAACGAAAACTCCGGCCGCCCAGAAACGCAAAAGACTGGATGACAAAAAAAAGCGGGCTCTTACCA
AACGCAACAGGCGCAGTATAAGCGATATCTGA

Upstream 100 bases:

>100_bases
GGCGCTGTGCGGTCTGGTGGAAAAAACGCTGAGAGATCAGGAAAAATAACGGCGCTTCCTGCACGGGCTTACCGGCACAA
GCGCCATGCAGGATACCATT

Downstream 100 bases:

>100_bases
ACCGGACCGCAGGTGCCTTGCTGCCTGCGGTGTACTGCCGCCGCCAAGCCCGCAGCAGCAGCGGTACCGCAGGATGCCGA
TGGCGGCTGACAGCGGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MLEVQLDDGTSLVIPEDEISFSASRGSGPGGQHVNVTASRVTVRFNVLHSAVLDRRQKERIASRLASRISSAGELAVSCA
DGRSQHANRRTALQRLAALLTHALHTPRPRTKTKTPAAQKRKRLDDKKKRALTKRNRRSISDI

Sequences:

>Translated_143_residues
MLEVQLDDGTSLVIPEDEISFSASRGSGPGGQHVNVTASRVTVRFNVLHSAVLDRRQKERIASRLASRISSAGELAVSCA
DGRSQHANRRTALQRLAALLTHALHTPRPRTKTKTPAAQKRKRLDDKKKRALTKRNRRSISDI
>Mature_143_residues
MLEVQLDDGTSLVIPEDEISFSASRGSGPGGQHVNVTASRVTVRFNVLHSAVLDRRQKERIASRLASRISSAGELAVSCA
DGRSQHANRRTALQRLAALLTHALHTPRPRTKTKTPAAQKRKRLDDKKKRALTKRNRRSISDI

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Homo sapiens, GI4557657, Length=99, Percent_Identity=34.3434343434343, Blast_Score=63, Evalue=7e-11,
Organism=Escherichia coli, GI1786389, Length=126, Percent_Identity=34.1269841269841, Blast_Score=67, Evalue=4e-13,
Organism=Drosophila melanogaster, GI19921098, Length=143, Percent_Identity=30.7692307692308, Blast_Score=67, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15796; Mature: 15796

Theoretical pI: Translated: 12.07; Mature: 12.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEVQLDDGTSLVIPEDEISFSASRGSGPGGQHVNVTASRVTVRFNVLHSAVLDRRQKER
CEEEEECCCCEEEECCCCCCEECCCCCCCCCCEEEEEHHHEEEHHHHHHHHHHHHHHHHH
IASRLASRISSAGELAVSCADGRSQHANRRTALQRLAALLTHALHTPRPRTKTKTPAAQK
HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
RKRLDDKKKRALTKRNRRSISDI
HHHCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLEVQLDDGTSLVIPEDEISFSASRGSGPGGQHVNVTASRVTVRFNVLHSAVLDRRQKER
CEEEEECCCCEEEECCCCCCEECCCCCCCCCCEEEEEHHHEEEHHHHHHHHHHHHHHHHH
IASRLASRISSAGELAVSCADGRSQHANRRTALQRLAALLTHALHTPRPRTKTKTPAAQK
HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
RKRLDDKKKRALTKRNRRSISDI
HHHCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]