| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is cysQ [H]
Identifier: 78355170
GI number: 78355170
Start: 115815
End: 116588
Strand: Reverse
Name: cysQ [H]
Synonym: Dde_0123
Alternate gene names: 78355170
Gene position: 116588-115815 (Counterclockwise)
Preceding gene: 78355172
Following gene: 78355168
Centisome position: 3.13
GC content: 61.76
Gene sequence:
>774_bases ATGTTTGAAAACGTACCCCTGAGCGGGATGATCCGCATAGCCAGACAGGCGGGAAAAGAAATCGCCGCCCGTCAGCAGGC CATTGTGCAGGCAGGTGAAGCCGCCATATGGCACAAGGACGACGACTCGCCCGTCACTCAGGCGGACAGGGCGGCCAGTG CCGTTCTGTGTGCCGGACTGGCACAGATGGCTCCTTCTGTTCCCGTTATTTCAGAAGAGGAATCCATTCCCCCTGCCGAG GTACGACGGGGCTGGGGGCTGTATTTTCTGGTGGACCCGCTGGACGGCACCAAAGGCTATCTGAAAGGAGAGGCAGACTA CAGTGTCTGTGTGGCACTCATGCGCCGCGACATGCCTCTGGCCGGAGTTGTCCATGTGCCTGCGCGCGGGCTTACCTATT ACGGTCTGCCCGGCACGGGCGCATGGCGCGAAGATGAAAGCGGCATGCCGGTGCGCCTGCATACCGCCCCCGCCGTTTCA GGAAAACAACCGGTGGTGCTGCAAAGCCGGGTGTCCGCAACCCCCAAACTGGATGCCTACATGGATGGTCTGCCCCATAC GCGCCTGATGGCAGGCAGTGCCTACAAGTTCTGCCTGCTGGCCGAGGGAACGGCCCAGATGTATCCCTGTCTGCACCCCA CATGGGAATGGGACACCGCCGCCGGAGAAGCCGTTCTGCGCGGAGCGGGCGGCACTGTGACCGATATGGACGGCCGCCCC CTCAGATACGGCAAAAGCTCTCTGCTCAACGATCTTTTCATAGCGCGGGGATGA
Upstream 100 bases:
>100_bases TACGGACAGCCCTGAGACGGCATGGCAGTGACAGATTACACATGAGGTATTATTACCAGTAAGATGGACGCATAGCCAGC TTGTATCCCCGGAGCACGCC
Downstream 100 bases:
>100_bases TCAGCGCTCCGCCCACAAGGCACGGCGCCCCTTGATACGCAGCCTGCCCAGCGGCAGCCCTCTGAAATACAGTCCGGCCT CCGGCAGGGATGCATCCACG
Product: 3'(2'),5'-bisphosphate nucleotidase
Products: NA
Alternate protein names: 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; DPNPase [H]
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MFENVPLSGMIRIARQAGKEIAARQQAIVQAGEAAIWHKDDDSPVTQADRAASAVLCAGLAQMAPSVPVISEEESIPPAE VRRGWGLYFLVDPLDGTKGYLKGEADYSVCVALMRRDMPLAGVVHVPARGLTYYGLPGTGAWREDESGMPVRLHTAPAVS GKQPVVLQSRVSATPKLDAYMDGLPHTRLMAGSAYKFCLLAEGTAQMYPCLHPTWEWDTAAGEAVLRGAGGTVTDMDGRP LRYGKSSLLNDLFIARG
Sequences:
>Translated_257_residues MFENVPLSGMIRIARQAGKEIAARQQAIVQAGEAAIWHKDDDSPVTQADRAASAVLCAGLAQMAPSVPVISEEESIPPAE VRRGWGLYFLVDPLDGTKGYLKGEADYSVCVALMRRDMPLAGVVHVPARGLTYYGLPGTGAWREDESGMPVRLHTAPAVS GKQPVVLQSRVSATPKLDAYMDGLPHTRLMAGSAYKFCLLAEGTAQMYPCLHPTWEWDTAAGEAVLRGAGGTVTDMDGRP LRYGKSSLLNDLFIARG >Mature_257_residues MFENVPLSGMIRIARQAGKEIAARQQAIVQAGEAAIWHKDDDSPVTQADRAASAVLCAGLAQMAPSVPVISEEESIPPAE VRRGWGLYFLVDPLDGTKGYLKGEADYSVCVALMRRDMPLAGVVHVPARGLTYYGLPGTGAWREDESGMPVRLHTAPAVS GKQPVVLQSRVSATPKLDAYMDGLPHTRLMAGSAYKFCLLAEGTAQMYPCLHPTWEWDTAAGEAVLRGAGGTVTDMDGRP LRYGKSSLLNDLFIARG
Specific function: Converts 3'(2')-phosphoadenosine 5'-phosphate (PAP) to AMP. May also convert adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) [H]
COG id: COG1218
COG function: function code P; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1790659, Length=250, Percent_Identity=41.6, Blast_Score=143, Evalue=1e-35, Organism=Caenorhabditis elegans, GI71995905, Length=166, Percent_Identity=33.7349397590361, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI71995897, Length=166, Percent_Identity=33.7349397590361, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17537869, Length=281, Percent_Identity=25.2669039145907, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI193202570, Length=209, Percent_Identity=25.8373205741627, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193202572, Length=206, Percent_Identity=27.6699029126214, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI24651149, Length=271, Percent_Identity=26.5682656826568, Blast_Score=80, Evalue=9e-16, Organism=Drosophila melanogaster, GI24641722, Length=231, Percent_Identity=27.7056277056277, Blast_Score=71, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006240 - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7 [H]
Molecular weight: Translated: 27568; Mature: 27568
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFENVPLSGMIRIARQAGKEIAARQQAIVQAGEAAIWHKDDDSPVTQADRAASAVLCAGL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHH AQMAPSVPVISEEESIPPAEVRRGWGLYFLVDPLDGTKGYLKGEADYSVCVALMRRDMPL HHHCCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCEEECCCHHHHHHHHHHCCCCC AGVVHVPARGLTYYGLPGTGAWREDESGMPVRLHTAPAVSGKQPVVLQSRVSATPKLDAY EEEEECCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCHHHH MDGLPHTRLMAGSAYKFCLLAEGTAQMYPCLHPTWEWDTAAGEAVLRGAGGTVTDMDGRP HCCCCCCEEECCCCEEEEEEECCHHHHCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCC LRYGKSSLLNDLFIARG CHHCHHHHHHHHHHCCC >Mature Secondary Structure MFENVPLSGMIRIARQAGKEIAARQQAIVQAGEAAIWHKDDDSPVTQADRAASAVLCAGL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHH AQMAPSVPVISEEESIPPAEVRRGWGLYFLVDPLDGTKGYLKGEADYSVCVALMRRDMPL HHHCCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCEEECCCHHHHHHHHHHCCCCC AGVVHVPARGLTYYGLPGTGAWREDESGMPVRLHTAPAVSGKQPVVLQSRVSATPKLDAY EEEEECCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCHHHH MDGLPHTRLMAGSAYKFCLLAEGTAQMYPCLHPTWEWDTAAGEAVLRGAGGTVTDMDGRP HCCCCCCEEECCCCEEEEEEECCHHHHCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCC LRYGKSSLLNDLFIARG CHHCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10993077 [H]