| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is vorB [H]
Identifier: 78355091
GI number: 78355091
Start: 35014
End: 36078
Strand: Direct
Name: vorB [H]
Synonym: Dde_0044
Alternate gene names: 78355091
Gene position: 35014-36078 (Clockwise)
Preceding gene: 78355090
Following gene: 78355092
Centisome position: 0.94
GC content: 60.38
Gene sequence:
>1065_bases ATGTCGGCAAAGCCCTCAAGAATTTTCATCAAAGGGAACGAGGCCATAGCTCGCGGAGCGCTGGCTGCCGGGTGCACCTG TTACTTCGGGTATCCCATCACGCCGCAGAACGATATTCCCGAGTTCATGTCCACGGCCATCATCGAGGCCGGAGGCGAGT TTGTGCAGGCAGAGTCGGAAGTGGCCGCAGCCAACATGCTGCTGGGTGCCGCTGCGGCCGGCCATCGTGCGCTGACCACT TCGTCCAGCCCCGGTGTTTCGCTGATGCAGGAAGCCATTTCCTACATGGCGGGCAGCGAACTGCCCGGTGTCATCGTGAA CATGAACCGCGGCGGCCCCGGTCTGGGTGACATCGGTTCGTCGCAGGGCGACTATTTCCAGTCCACCCGCGGCGGCGGAC ACGGCGACTACCGCACGCTGGTGCTTGCTCCGGGTACCTGTCAGGAAGGCTACGACATGATGATCGAAGCCTTTGATCTG TCATTCAAGTACCGCAACCCCGTGCTGATGCTGGGCGATGCCATTGTGGGCCAGATGAAGGAACCCGTCACGCCGTGGTC TCCTGAAAAAATTGAAAACTACGGTGCCGCGGACTGGTGCCTGAGCGGTGCCGCCGGACGCGGTCCGCGTCTGCTCAAGT CGCTGTTTCTTGATGACGGGGCACTGGCAGGACAGAACAGGCATCTGCAGCAGAAGTACGAGGCCATGAAGGTCGAAGCA AGAGCCGAAGTATACGAATGCGATGATGCCGAGCTCGTGGTGGTTGCCTATGGTTCCATCGGCCGCATAGTGAAAAGTTC GGTGCGCCGCCTGCGTGCGGAAGGCCGCAAAGTGGGCCTTGTGCGTCCGCTGACGCTCTACCCCTTCCCCGATGCTCCTT TGCGGGCACTGGCGGAAAAAGGCAAGCGGTTCCTTACCATTGAACAGAACTGCGGTCAGATGGTCGAAGACGTGCGTCTT TCGGTCCGGGGTCTGGCCGATTCGGATTTCCACGGTCATATGCCCGGCAACCTGCCCGGTTCAGACGACTTTGTGGAAGC CATAGTCGCAAGGCTGGGGAGGTAA
Upstream 100 bases:
>100_bases ACGGGGTGCGCTTCGTGCGCGCTTATCTGCCCCGACTTAGCGATACGGGTATACCGGCCCGAAAAGCCCGCCAAAGGCGA AAAGGCAAAGGAGTAGGCGC
Downstream 100 bases:
>100_bases GCCATGCAGAGCGCAAACAACAACGAAAAGCTGGTGTTCGATGTGCCCGAGGTGATGGCCGACCGTCCCACGCACTACTG CCCCGGTTGCCACCATGGTG
Product: 2-ketoisovalerate ferredoxin reductase
Products: NA
Alternate protein names: VOR; 2-oxoisovalerate ferredoxin reductase subunit beta; 2-oxoisovalerate oxidoreductase beta chain [H]
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MSAKPSRIFIKGNEAIARGALAAGCTCYFGYPITPQNDIPEFMSTAIIEAGGEFVQAESEVAAANMLLGAAAAGHRALTT SSSPGVSLMQEAISYMAGSELPGVIVNMNRGGPGLGDIGSSQGDYFQSTRGGGHGDYRTLVLAPGTCQEGYDMMIEAFDL SFKYRNPVLMLGDAIVGQMKEPVTPWSPEKIENYGAADWCLSGAAGRGPRLLKSLFLDDGALAGQNRHLQQKYEAMKVEA RAEVYECDDAELVVVAYGSIGRIVKSSVRRLRAEGRKVGLVRPLTLYPFPDAPLRALAEKGKRFLTIEQNCGQMVEDVRL SVRGLADSDFHGHMPGNLPGSDDFVEAIVARLGR
Sequences:
>Translated_354_residues MSAKPSRIFIKGNEAIARGALAAGCTCYFGYPITPQNDIPEFMSTAIIEAGGEFVQAESEVAAANMLLGAAAAGHRALTT SSSPGVSLMQEAISYMAGSELPGVIVNMNRGGPGLGDIGSSQGDYFQSTRGGGHGDYRTLVLAPGTCQEGYDMMIEAFDL SFKYRNPVLMLGDAIVGQMKEPVTPWSPEKIENYGAADWCLSGAAGRGPRLLKSLFLDDGALAGQNRHLQQKYEAMKVEA RAEVYECDDAELVVVAYGSIGRIVKSSVRRLRAEGRKVGLVRPLTLYPFPDAPLRALAEKGKRFLTIEQNCGQMVEDVRL SVRGLADSDFHGHMPGNLPGSDDFVEAIVARLGR >Mature_353_residues SAKPSRIFIKGNEAIARGALAAGCTCYFGYPITPQNDIPEFMSTAIIEAGGEFVQAESEVAAANMLLGAAAAGHRALTTS SSPGVSLMQEAISYMAGSELPGVIVNMNRGGPGLGDIGSSQGDYFQSTRGGGHGDYRTLVLAPGTCQEGYDMMIEAFDLS FKYRNPVLMLGDAIVGQMKEPVTPWSPEKIENYGAADWCLSGAAGRGPRLLKSLFLDDGALAGQNRHLQQKYEAMKVEAR AEVYECDDAELVVVAYGSIGRIVKSSVRRLRAEGRKVGLVRPLTLYPFPDAPLRALAEKGKRFLTIEQNCGQMVEDVRLS VRGLADSDFHGHMPGNLPGSDDFVEAIVARLGR
Specific function: Unknown
COG id: COG0674
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002880 - InterPro: IPR009014 - InterPro: IPR015941 [H]
Pfam domain/function: PF01855 POR_N [H]
EC number: =1.2.7.7 [H]
Molecular weight: Translated: 37887; Mature: 37755
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKPSRIFIKGNEAIARGALAAGCTCYFGYPITPQNDIPEFMSTAIIEAGGEFVQAESE CCCCCCEEEEECCHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH VAAANMLLGAAAAGHRALTTSSSPGVSLMQEAISYMAGSELPGVIVNMNRGGPGLGDIGS HHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC SQGDYFQSTRGGGHGDYRTLVLAPGTCQEGYDMMIEAFDLSFKYRNPVLMLGDAIVGQMK CCCCHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCEEEECCCEEEECHHHHHHHH EPVTPWSPEKIENYGAADWCLSGAAGRGPRLLKSLFLDDGALAGQNRHLQQKYEAMKVEA CCCCCCCHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH RAEVYECDDAELVVVAYGSIGRIVKSSVRRLRAEGRKVGLVRPLTLYPFPDAPLRALAEK HHHEEECCCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCHHHHHHHHC GKRFLTIEQNCGQMVEDVRLSVRGLADSDFHGHMPGNLPGSDDFVEAIVARLGR CCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SAKPSRIFIKGNEAIARGALAAGCTCYFGYPITPQNDIPEFMSTAIIEAGGEFVQAESE CCCCCEEEEECCHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH VAAANMLLGAAAAGHRALTTSSSPGVSLMQEAISYMAGSELPGVIVNMNRGGPGLGDIGS HHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC SQGDYFQSTRGGGHGDYRTLVLAPGTCQEGYDMMIEAFDLSFKYRNPVLMLGDAIVGQMK CCCCHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCEEEECCCEEEECHHHHHHHH EPVTPWSPEKIENYGAADWCLSGAAGRGPRLLKSLFLDDGALAGQNRHLQQKYEAMKVEA CCCCCCCHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH RAEVYECDDAELVVVAYGSIGRIVKSSVRRLRAEGRKVGLVRPLTLYPFPDAPLRALAEK HHHEEECCCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCHHHHHHHHC GKRFLTIEQNCGQMVEDVRLSVRGLADSDFHGHMPGNLPGSDDFVEAIVARLGR CCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]