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The map label for this gene is infC

Identifier: 304570590

GI number: 304570590

Start: 2654681

End: 2655265

Strand: Reverse

Name: infC

Synonym: NA

Alternate gene names: 304570590

Gene position: 2655265-2654681 (Counterclockwise)

Preceding gene: 78357681

Following gene: 78357679

Centisome position: 71.18

GC content: 54.87

Gene sequence:

>585_bases
ATTGTGAGGAACCGTTTAAAAGTGGAGGGATGCGCTATAGCTTCTCCTAAGTTTCGTCGGCAGGAGCCGCAGGACGTGAC
GCGTCGCAACGAGCAGATTCGTGCACGCGAAGTTCGTGTCATCGATGCAGATGGCAGCCAGCTTGGTATTATGTCCCGTA
ACGACGCAGTTGCCGTCGCCAAGGAACAGGGACTGGATCTTGTTGAGGTGGCTGCTGGTGCCGTGCCCCCTGTCTGCAGG
GTTATGGATTACGGCAAGTACAAGTACGAGGCGCAGAAGAAAAAGCAGGAAGCCAAAAAACGGCAGACTGTCATTCAGGT
CAAGGAAATCAAGGTTCGGCCCAAGACGGACGAACATGATTACCAGACCAAGCTCAAGCACATCCGCCGGTTCCTTGAAG
ACGGTGACAGATGCAAGGTTACTGTGTTTTTCCGCGGTCGTGAGATTGTCCACAAGGACAGAGGCATGATGCTGCTGCAG
CGCGCGCAGGAAGATACCAAAGATATCGCCAAGGTGGAGCAGGAGCCCCGCGCCGAAGGCCGTACCCTGCATATGCTGCT
GACACCGCTCGCCAAGAAAGTGTAA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: translation initiation factor IF-3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:
NA

Sequences:

>Translated_194_residues
MVRNRLKVEGCAIASPKFRRQEPQDVTRRNEQIRAREVRVIDADGSQLGIMSRNDAVAVAKEQGLDLVEVAAGAVPPVCR
VMDYGKYKYEAQKKKQEAKKRQTVIQVKEIKVRPKTDEHDYQTKLKHIRRFLEDGDRCKVTVFFRGREIVHKDRGMMLLQ
RAQEDTKDIAKVEQEPRAEGRTLHMLLTPLAKKV
>Mature_194_residues
MVRNRLKVEGCAIASPKFRRQEPQDVTRRNEQIRAREVRVIDADGSQLGIMSRNDAVAVAKEQGLDLVEVAAGAVPPVCR
VMDYGKYKYEAQKKKQEAKKRQTVIQVKEIKVRPKTDEHDYQTKLKHIRRFLEDGDRCKVTVFFRGREIVHKDRGMMLLQ
RAQEDTKDIAKVEQEPRAEGRTLHMLLTPLAKKV

Specific function: IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IF-3 family [H]

Homologues:

Organism=Escherichia coli, GI1788012, Length=164, Percent_Identity=53.0487804878049, Blast_Score=163, Evalue=7e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019813
- InterPro:   IPR001288
- InterPro:   IPR019815
- InterPro:   IPR019814 [H]

Pfam domain/function: PF00707 IF3_C; PF05198 IF3_N [H]

EC number: NA

Molecular weight: Translated: 22419; Mature: 22419

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: PS00938 IF3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRNRLKVEGCAIASPKFRRQEPQDVTRRNEQIRAREVRVIDADGSQLGIMSRNDAVAVA
CCCCCEEECCEEECCCHHCCCCCHHHHHHHHHHHHEEEEEEECCCCEEEEEECCCEEEEE
KEQGLDLVEVAAGAVPPVCRVMDYGKYKYEAQKKKQEAKKRQTVIQVKEIKVRPKTDEHD
HHCCCCHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHH
YQTKLKHIRRFLEDGDRCKVTVFFRGREIVHKDRGMMLLQRAQEDTKDIAKVEQEPRAEG
HHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC
RTLHMLLTPLAKKV
CEEHHHHHHHHHCC
>Mature Secondary Structure
MVRNRLKVEGCAIASPKFRRQEPQDVTRRNEQIRAREVRVIDADGSQLGIMSRNDAVAVA
CCCCCEEECCEEECCCHHCCCCCHHHHHHHHHHHHEEEEEEECCCCEEEEEECCCEEEEE
KEQGLDLVEVAAGAVPPVCRVMDYGKYKYEAQKKKQEAKKRQTVIQVKEIKVRPKTDEHD
HHCCCCHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHH
YQTKLKHIRRFLEDGDRCKVTVFFRGREIVHKDRGMMLLQRAQEDTKDIAKVEQEPRAEG
HHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC
RTLHMLLTPLAKKV
CEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA