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The map label for this gene is elbB [H]

Identifier: 78224706

GI number: 78224706

Start: 3956194

End: 3956847

Strand: Reverse

Name: elbB [H]

Synonym: Gmet_3523

Alternate gene names: 78224706

Gene position: 3956847-3956194 (Counterclockwise)

Preceding gene: 78224707

Following gene: 78224705

Centisome position: 98.99

GC content: 61.47

Gene sequence:

>654_bases
ATGAAGAAAATCGGAGTTGTCCTTTCCGGCTGTGGTGTTTACGACGGTAGTGAGATTCACGAGGCGGTTTTTACCCTGCT
TGCCATCGACCGGAACGGGGCAGAGGCGGTATGCCTGGCGCCCGACATGGAATTTCGCGAGGTGAACCATCTCACCTCCC
AGGAGACCGGCGCCGTCCGCAATACCCTCGTGGAGTCGGCCCGGATCGCACGCGGCAAGATCAGGAACGTGGCGGAGATT
GCGGCTGCCGACCTGGATGCCGTCGTCTTTCCCGGCGGTTTCGGGGCGGCAAAGAACCTTTGCAATTTCGCGGAGAAGGG
GGCAGATGCGGCCATCCATCCCGAGGTGGCGCGGCTTATCCGGGAGATGGCCCTCGCGAAGAAGCCCATTGGCGCCATCT
GCATCGCTCCGGCTCTCATCGCCGCAACCCTCGGCCGTGACTACAAGCCGAAAGTGACCATCGGGACCGACGCCGGCACG
GCGGCAGCAATTGCCGCTACGGGGAGCGAGCATGTTGATTGTCCAGTTACGGAATTTGTGGTGGACCGGGAGAACAAGAT
TGTCACCACCCCCGCCTACATGCTTGCCAACCGGATCTCTGAAGCGGCCGAAGGGATCGAGAAGGCGGTGAAGACGGTCA
TCGACATGGCGTGA

Upstream 100 bases:

>100_bases
GGGATTACACTTTACTCCACTTTGGTACCCTCTATTACTCCATTCACGCCAGATATGACCGGCGTCCGCCATCCCGCAAC
GAAAACAAGGAGGAGAGCGC

Downstream 100 bases:

>100_bases
AGACGGTGCGCCAGCACATTCTAATCAAGGAGGAGAAAGGATGAAGCGATTGGTAACCGTGGCATGGATTGTTGTGGCTG
TTGCCGGCCTCAGCGGCACG

Product: isoprenoid biosynthesis protein with amidotransferase-like domain

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKKIGVVLSGCGVYDGSEIHEAVFTLLAIDRNGAEAVCLAPDMEFREVNHLTSQETGAVRNTLVESARIARGKIRNVAEI
AAADLDAVVFPGGFGAAKNLCNFAEKGADAAIHPEVARLIREMALAKKPIGAICIAPALIAATLGRDYKPKVTIGTDAGT
AAAIAATGSEHVDCPVTEFVVDRENKIVTTPAYMLANRISEAAEGIEKAVKTVIDMA

Sequences:

>Translated_217_residues
MKKIGVVLSGCGVYDGSEIHEAVFTLLAIDRNGAEAVCLAPDMEFREVNHLTSQETGAVRNTLVESARIARGKIRNVAEI
AAADLDAVVFPGGFGAAKNLCNFAEKGADAAIHPEVARLIREMALAKKPIGAICIAPALIAATLGRDYKPKVTIGTDAGT
AAAIAATGSEHVDCPVTEFVVDRENKIVTTPAYMLANRISEAAEGIEKAVKTVIDMA
>Mature_217_residues
MKKIGVVLSGCGVYDGSEIHEAVFTLLAIDRNGAEAVCLAPDMEFREVNHLTSQETGAVRNTLVESARIARGKIRNVAEI
AAADLDAVVFPGGFGAAKNLCNFAEKGADAAIHPEVARLIREMALAKKPIGAICIAPALIAATLGRDYKPKVTIGTDAGT
AAAIAATGSEHVDCPVTEFVVDRENKIVTTPAYMLANRISEAAEGIEKAVKTVIDMA

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=225, Percent_Identity=45.7777777777778, Blast_Score=180, Evalue=9e-46,
Organism=Homo sapiens, GI296531408, Length=225, Percent_Identity=40, Blast_Score=140, Evalue=9e-34,
Organism=Escherichia coli, GI87082228, Length=218, Percent_Identity=56.8807339449541, Blast_Score=243, Evalue=7e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 22715; Mature: 22715

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIGVVLSGCGVYDGSEIHEAVFTLLAIDRNGAEAVCLAPDMEFREVNHLTSQETGAVR
CCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH
NTLVESARIARGKIRNVAEIAAADLDAVVFPGGFGAAKNLCNFAEKGADAAIHPEVARLI
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHH
REMALAKKPIGAICIAPALIAATLGRDYKPKVTIGTDAGTAAAIAATGSEHVDCPVTEFV
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCCCCCCCHHHHH
VDRENKIVTTPAYMLANRISEAAEGIEKAVKTVIDMA
HCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKIGVVLSGCGVYDGSEIHEAVFTLLAIDRNGAEAVCLAPDMEFREVNHLTSQETGAVR
CCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH
NTLVESARIARGKIRNVAEIAAADLDAVVFPGGFGAAKNLCNFAEKGADAAIHPEVARLI
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHH
REMALAKKPIGAICIAPALIAATLGRDYKPKVTIGTDAGTAAAIAATGSEHVDCPVTEFV
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCCCCCCCHHHHH
VDRENKIVTTPAYMLANRISEAAEGIEKAVKTVIDMA
HCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]