Click here to switch to the map view.

The map label for this gene is 78224697

Identifier: 78224697

GI number: 78224697

Start: 3947884

End: 3949440

Strand: Reverse

Name: 78224697

Synonym: Gmet_3514

Alternate gene names: NA

Gene position: 3949440-3947884 (Counterclockwise)

Preceding gene: 78224704

Following gene: 78224696

Centisome position: 98.8

GC content: 58.06

Gene sequence:

>1557_bases
ATGAGATATTTCAGGCGGATAGTACCTTTCGTGCTCCTCACGCTGACTGCCCTGGCGTTTGCAGGCTGCGGGGGAGGAGG
TGGTGGTGGCGCCGCGCCGGCCGCAACCCAAACAGACACCTACCGCTTCTTTGCCGGCAGCCTCCACGCCGTCGACCCGG
CAAATCCCGCAAACCCCCTGGTTGTTGACAGCGAAGCGCATGCTGATGAAGCAACCATAGTACACGGCACCATCGACGCT
GCCGCCAAGACGGTGACCGATCTCCACGCCCGCACGGTGGTCTACGTGAAGGGGGGGAAACTGTACAAGGTAAGCGCCCT
GAAGGGGGCGACTCCTGCCCCGGTCCAGCTCTCCAGTGCGGCCGACGTTCAGTCCATTGAAACGGTTGCACCCGACCTTG
CCAACCATAACAATGCGCAGGTCGTTTTTCGTGCAGTCGCGGTAGCACCCACACCTACACCCACACCGGTACCGGTAGAA
CCGGTAGCTATTAAGCAAGCGTCATTGGCAGCAGGAGATGCATCGGGAACAAGCTATAAGATGGTCAGGGTGGGGATGAG
CGCTACGGATACACCGATCCCGGCCAAGGAACCCCTTTCAGCTCTTAACGACCAGACCGGCGCCATCATCGGTTGGCTCG
CCTTTGAAGACAATGCCAATGTGATCAAACGATACGATGCGAACTTCCAGAACGGCAAGGATGTTATCCCCTATAAGAAC
AGTGTCGCGTTCGTGGACTCCACCCTCGAGGGGATCTTCATGGAGGTCGACGGCGATCTCTATGGCTACCATGTGGCCAC
GGGGGAACTCAGGAGGCTCACTTCCACCGCAACGGGTATATATGGCAACACCGTAAAGGACGGCGATCATCTCTACGTTA
CGGACGGTGGCTATAACATCCTGAAGGTGCCCCTCGGCAATCCGACATCGGCTGAGACATTCGTGCCGACTGATGGCGCA
TGGGCGATGCCTTTCGGCTTTACCGACACCAAGGTGGTGTATTACCAGGGAGGAAAGATGCTGGCGAAACCGAAGGTGGG
CGGAGAGCCTGTCATCCTCTCCCCAGCCGGGTGGGGGTTCGTGGGAGCCAAGGGGACAGTTGTTTATTTCAACTCCTCTA
AGGAAGGAATTCCAACGGCGGTAGCCGTCAGGGATGACGGAACCGTCCTGAGCGAGACTGCCAATGCCTACTGGGTCGGT
GCCTCAGTCTCCAACACCTATGCCCCGGCGGTCAGCTCAACTCCCCAATACATGGTCATGGCCACCGGCTATAAAACCGA
CGGGACGGGGTTTGGGGGAGGTGCGCTCCAGTCCTTCGACGCGGCAACCAACAGGCTGGTGGCAACCCTCGGCACCATCC
CGGCTGATGTCCGCTGGATAGAGGTGTATGGCCAGATTGGCGTCGACGTCCTTGGATATGCATGGGATAACAATGACGAT
GACGTATTCTTTATGAACCTCAAGACCCCGAACTCCCTGGTACGTATGTCCAATACCCCTGAAGTCGACGAGTGGCCACT
TCCCGTGCTTGACTATGATTGGTGGCGGTGGAGTTAA

Upstream 100 bases:

>100_bases
GGATACGACCCCCTTTTCTCACCATGTCAGGGTGCAAGCCTGACAACCTTGCTCTTTGTATTGGCAAGGCAGTTTTACTA
CAACTATCAAGGAGGATAGT

Downstream 100 bases:

>100_bases
TAAAGATTTCTCCCCCTGCGGTAATCCCGCAGGGGGAATCTCCCTCTGTATTCTCTTCCTGATCAATTCTCCCTCCCCTT
CCATTCCAACGTCCTCCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 518; Mature: 518

Protein sequence:

>518_residues
MRYFRRIVPFVLLTLTALAFAGCGGGGGGGAAPAATQTDTYRFFAGSLHAVDPANPANPLVVDSEAHADEATIVHGTIDA
AAKTVTDLHARTVVYVKGGKLYKVSALKGATPAPVQLSSAADVQSIETVAPDLANHNNAQVVFRAVAVAPTPTPTPVPVE
PVAIKQASLAAGDASGTSYKMVRVGMSATDTPIPAKEPLSALNDQTGAIIGWLAFEDNANVIKRYDANFQNGKDVIPYKN
SVAFVDSTLEGIFMEVDGDLYGYHVATGELRRLTSTATGIYGNTVKDGDHLYVTDGGYNILKVPLGNPTSAETFVPTDGA
WAMPFGFTDTKVVYYQGGKMLAKPKVGGEPVILSPAGWGFVGAKGTVVYFNSSKEGIPTAVAVRDDGTVLSETANAYWVG
ASVSNTYAPAVSSTPQYMVMATGYKTDGTGFGGGALQSFDAATNRLVATLGTIPADVRWIEVYGQIGVDVLGYAWDNNDD
DVFFMNLKTPNSLVRMSNTPEVDEWPLPVLDYDWWRWS

Sequences:

>Translated_518_residues
MRYFRRIVPFVLLTLTALAFAGCGGGGGGGAAPAATQTDTYRFFAGSLHAVDPANPANPLVVDSEAHADEATIVHGTIDA
AAKTVTDLHARTVVYVKGGKLYKVSALKGATPAPVQLSSAADVQSIETVAPDLANHNNAQVVFRAVAVAPTPTPTPVPVE
PVAIKQASLAAGDASGTSYKMVRVGMSATDTPIPAKEPLSALNDQTGAIIGWLAFEDNANVIKRYDANFQNGKDVIPYKN
SVAFVDSTLEGIFMEVDGDLYGYHVATGELRRLTSTATGIYGNTVKDGDHLYVTDGGYNILKVPLGNPTSAETFVPTDGA
WAMPFGFTDTKVVYYQGGKMLAKPKVGGEPVILSPAGWGFVGAKGTVVYFNSSKEGIPTAVAVRDDGTVLSETANAYWVG
ASVSNTYAPAVSSTPQYMVMATGYKTDGTGFGGGALQSFDAATNRLVATLGTIPADVRWIEVYGQIGVDVLGYAWDNNDD
DVFFMNLKTPNSLVRMSNTPEVDEWPLPVLDYDWWRWS
>Mature_518_residues
MRYFRRIVPFVLLTLTALAFAGCGGGGGGGAAPAATQTDTYRFFAGSLHAVDPANPANPLVVDSEAHADEATIVHGTIDA
AAKTVTDLHARTVVYVKGGKLYKVSALKGATPAPVQLSSAADVQSIETVAPDLANHNNAQVVFRAVAVAPTPTPTPVPVE
PVAIKQASLAAGDASGTSYKMVRVGMSATDTPIPAKEPLSALNDQTGAIIGWLAFEDNANVIKRYDANFQNGKDVIPYKN
SVAFVDSTLEGIFMEVDGDLYGYHVATGELRRLTSTATGIYGNTVKDGDHLYVTDGGYNILKVPLGNPTSAETFVPTDGA
WAMPFGFTDTKVVYYQGGKMLAKPKVGGEPVILSPAGWGFVGAKGTVVYFNSSKEGIPTAVAVRDDGTVLSETANAYWVG
ASVSNTYAPAVSSTPQYMVMATGYKTDGTGFGGGALQSFDAATNRLVATLGTIPADVRWIEVYGQIGVDVLGYAWDNNDD
DVFFMNLKTPNSLVRMSNTPEVDEWPLPVLDYDWWRWS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54748; Mature: 54748

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYFRRIVPFVLLTLTALAFAGCGGGGGGGAAPAATQTDTYRFFAGSLHAVDPANPANPL
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCE
VVDSEAHADEATIVHGTIDAAAKTVTDLHARTVVYVKGGKLYKVSALKGATPAPVQLSSA
EECCCCCCCCEEEEEECHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCCCCCEEECCC
ADVQSIETVAPDLANHNNAQVVFRAVAVAPTPTPTPVPVEPVAIKQASLAAGDASGTSYK
CCHHHHHHHCCHHHCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEHCCCCCCCCCEEE
MVRVGMSATDTPIPAKEPLSALNDQTGAIIGWLAFEDNANVIKRYDANFQNGKDVIPYKN
EEEECCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCC
SVAFVDSTLEGIFMEVDGDLYGYHVATGELRRLTSTATGIYGNTVKDGDHLYVTDGGYNI
CEEEEECCCCEEEEEECCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEE
LKVPLGNPTSAETFVPTDGAWAMPFGFTDTKVVYYQGGKMLAKPKVGGEPVILSPAGWGF
EEEECCCCCCCCEEECCCCCEEECCCCCCCEEEEEECCEEEECCCCCCCCEEECCCCCCE
VGAKGTVVYFNSSKEGIPTAVAVRDDGTVLSETANAYWVGASVSNTYAPAVSSTPQYMVM
ECCCEEEEEECCCCCCCCEEEEEECCCCEEECCCCEEEEECCCCCCCCCCCCCCCCEEEE
ATGYKTDGTGFGGGALQSFDAATNRLVATLGTIPADVRWIEVYGQIGVDVLGYAWDNNDD
EECCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCCEEEEEEECCCCC
DVFFMNLKTPNSLVRMSNTPEVDEWPLPVLDYDWWRWS
CEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEECC
>Mature Secondary Structure
MRYFRRIVPFVLLTLTALAFAGCGGGGGGGAAPAATQTDTYRFFAGSLHAVDPANPANPL
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCE
VVDSEAHADEATIVHGTIDAAAKTVTDLHARTVVYVKGGKLYKVSALKGATPAPVQLSSA
EECCCCCCCCEEEEEECHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCCCCCEEECCC
ADVQSIETVAPDLANHNNAQVVFRAVAVAPTPTPTPVPVEPVAIKQASLAAGDASGTSYK
CCHHHHHHHCCHHHCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEHCCCCCCCCCEEE
MVRVGMSATDTPIPAKEPLSALNDQTGAIIGWLAFEDNANVIKRYDANFQNGKDVIPYKN
EEEECCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCC
SVAFVDSTLEGIFMEVDGDLYGYHVATGELRRLTSTATGIYGNTVKDGDHLYVTDGGYNI
CEEEEECCCCEEEEEECCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEE
LKVPLGNPTSAETFVPTDGAWAMPFGFTDTKVVYYQGGKMLAKPKVGGEPVILSPAGWGF
EEEECCCCCCCCEEECCCCCEEECCCCCCCEEEEEECCEEEECCCCCCCCEEECCCCCCE
VGAKGTVVYFNSSKEGIPTAVAVRDDGTVLSETANAYWVGASVSNTYAPAVSSTPQYMVM
ECCCEEEEEECCCCCCCCEEEEEECCCCEEECCCCEEEEECCCCCCCCCCCCCCCCEEEE
ATGYKTDGTGFGGGALQSFDAATNRLVATLGTIPADVRWIEVYGQIGVDVLGYAWDNNDD
EECCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCCEEEEEEECCCCC
DVFFMNLKTPNSLVRMSNTPEVDEWPLPVLDYDWWRWS
CEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA