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The map label for this gene is abgB [H]

Identifier: 78224575

GI number: 78224575

Start: 3798740

End: 3799903

Strand: Reverse

Name: abgB [H]

Synonym: Gmet_3385

Alternate gene names: 78224575

Gene position: 3799903-3798740 (Counterclockwise)

Preceding gene: 78224579

Following gene: 78224574

Centisome position: 95.06

GC content: 65.64

Gene sequence:

>1164_bases
ATGGATCTGGATCGAATCAAGGGGGAGATCGTCGCCTTCGTCGAGGGGCGGAAGAGCGAATTTGCTGCTATTGCGGAGGA
TCTTTATCTCCATCCCGAGACCGGCCTGAACGAGGTGCGGAGTTCGGCCCTCCTGGCCGATTTCCTGGAACGGGAGGGGT
TCCGGGTGGAGCGGGGTATTGCCGGGCTTCCCACGGCGTTCCGGGCCGAGACGGGTGAGGGTGGGCCGGTCATTGCCTTC
ATGGCCGAGATGGACGCCCTCCCGGTTATGGGTCATGCCTGCGGCCACAACGTGATCGCCGCCGCGGCCGTCGGGGCTGC
CACGGCACTGCGCTCCATTCTTCCTCCGGATGCGGCCCGGATCGTCGTCCTCGGCACCCCCGCCGAGGAGATGGGAATCG
GGAAGGTGGATATGATCGCCAACGGCGCCTTTGACGGGGTCGAGTTCGCCCTGATGGTGCATCCATCTTCGCGGCGGTAC
GTGATCAAGCACTACCTGGGGCTCGCCCGGGTTCGCTTCACCTTTTTCGGCAAGCCGGCCCATGCCGCCGCCTACCCGGA
AGAGGGGATCAACGCCCTCGATGGTGTCATCCAGACCTTCAACGGGATCAGCGCCCTGCGCCAGCAACTCCGCCAGGACG
TGCGGGTCCACGGGATCATCACCGAGGGGGGAGTTGCCCCCAACATCATTCCGGAGCGGGCCTCGGCCCATTTCTATGTC
CGGGCCGACGACCTGGCGGAGCTGGAGCGGGCGAAGGCACGGGTTCTCGCATGCGCCGAAGGGGCCGCCCTGGCCACCGG
GTGCCGGCTCCAGGTGGACGCGGATCCCCGGATCATGGCCCCCCTCAAGGTGAACCGGATCTTCTCCGACCTCTACTCGG
CCCAGCTGGCGTATTTGGACCTTCAGGAATCGGAGAATCAGCCCGATAAGAACAAGGGGTCGTCGGACATCGGCAACGTC
TCCCAGATCGTGCCGACCATCCACCCCCATGTCCCCATTGGCGACGGCATCAATATCCACAGCGAGGCATTCGCCCGAGC
CACGGTCTCCGGAAAGGGAAAGGCCGCCGTGGCGGAGGGGGCCACGGCCCTGGCGCTGACCGCGGCGGAGCTGGCCGCTC
GGCCGGATATCCGTGAGGAAATCTGGCGGGAATTTCGCTCATGA

Upstream 100 bases:

>100_bases
GGGCCAACGTAGCAAAACTAAAGGGCTTTGACAATAAAAACCTTGACAAATACCCGTCTCTGGGGTTGAATTTCATTAAA
ATAAATTCGGGGTGGCCGTG

Downstream 100 bases:

>100_bases
GAATTCTGCCATTGCCATGGTGAGAATACATGGTATATAGTATTTAATGAAAATGCTGGCGACTCGAATAGGACGGCCAT
GAACGGATCAATGCGGCATA

Product: peptidase M20D, amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MDLDRIKGEIVAFVEGRKSEFAAIAEDLYLHPETGLNEVRSSALLADFLEREGFRVERGIAGLPTAFRAETGEGGPVIAF
MAEMDALPVMGHACGHNVIAAAAVGAATALRSILPPDAARIVVLGTPAEEMGIGKVDMIANGAFDGVEFALMVHPSSRRY
VIKHYLGLARVRFTFFGKPAHAAAYPEEGINALDGVIQTFNGISALRQQLRQDVRVHGIITEGGVAPNIIPERASAHFYV
RADDLAELERAKARVLACAEGAALATGCRLQVDADPRIMAPLKVNRIFSDLYSAQLAYLDLQESENQPDKNKGSSDIGNV
SQIVPTIHPHVPIGDGINIHSEAFARATVSGKGKAAVAEGATALALTAAELAARPDIREEIWREFRS

Sequences:

>Translated_387_residues
MDLDRIKGEIVAFVEGRKSEFAAIAEDLYLHPETGLNEVRSSALLADFLEREGFRVERGIAGLPTAFRAETGEGGPVIAF
MAEMDALPVMGHACGHNVIAAAAVGAATALRSILPPDAARIVVLGTPAEEMGIGKVDMIANGAFDGVEFALMVHPSSRRY
VIKHYLGLARVRFTFFGKPAHAAAYPEEGINALDGVIQTFNGISALRQQLRQDVRVHGIITEGGVAPNIIPERASAHFYV
RADDLAELERAKARVLACAEGAALATGCRLQVDADPRIMAPLKVNRIFSDLYSAQLAYLDLQESENQPDKNKGSSDIGNV
SQIVPTIHPHVPIGDGINIHSEAFARATVSGKGKAAVAEGATALALTAAELAARPDIREEIWREFRS
>Mature_387_residues
MDLDRIKGEIVAFVEGRKSEFAAIAEDLYLHPETGLNEVRSSALLADFLEREGFRVERGIAGLPTAFRAETGEGGPVIAF
MAEMDALPVMGHACGHNVIAAAAVGAATALRSILPPDAARIVVLGTPAEEMGIGKVDMIANGAFDGVEFALMVHPSSRRY
VIKHYLGLARVRFTFFGKPAHAAAYPEEGINALDGVIQTFNGISALRQQLRQDVRVHGIITEGGVAPNIIPERASAHFYV
RADDLAELERAKARVLACAEGAALATGCRLQVDADPRIMAPLKVNRIFSDLYSAQLAYLDLQESENQPDKNKGSSDIGNV
SQIVPTIHPHVPIGDGINIHSEAFARATVSGKGKAAVAEGATALALTAAELAARPDIREEIWREFRS

Specific function: Required but not essential for aminobenzoyl-glutamate utilization. May participate in hydrolysis of aminobenzoyl- glutamate to aminobenzoate, either alone or in combination with AbgA [H]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI58082085, Length=405, Percent_Identity=33.5802469135802, Blast_Score=215, Evalue=5e-56,
Organism=Escherichia coli, GI1787598, Length=302, Percent_Identity=32.7814569536424, Blast_Score=144, Evalue=9e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017145
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 41375; Mature: 41375

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLDRIKGEIVAFVEGRKSEFAAIAEDLYLHPETGLNEVRSSALLADFLEREGFRVERGI
CCHHHHCCEEEEEECCCCHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCCEEECCC
AGLPTAFRAETGEGGPVIAFMAEMDALPVMGHACGHNVIAAAAVGAATALRSILPPDAAR
CCCCCHHCCCCCCCCCEEEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCE
IVVLGTPAEEMGIGKVDMIANGAFDGVEFALMVHPSSRRYVIKHYLGLARVRFTFFGKPA
EEEEECCHHHHCCCCEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHEEEEEECCCC
HAAAYPEEGINALDGVIQTFNGISALRQQLRQDVRVHGIITEGGVAPNIIPERASAHFYV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCEEEE
RADDLAELERAKARVLACAEGAALATGCRLQVDADPRIMAPLKVNRIFSDLYSAQLAYLD
ECHHHHHHHHHHHHHHEECCCCEEECCCEEEECCCCCEECCHHHHHHHHHHHHHHEEEEE
LQESENQPDKNKGSSDIGNVSQIVPTIHPHVPIGDGINIHSEAFARATVSGKGKAAVAEG
CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHEEECCCCCEEHHCC
ATALALTAAELAARPDIREEIWREFRS
CHHHHHHHHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MDLDRIKGEIVAFVEGRKSEFAAIAEDLYLHPETGLNEVRSSALLADFLEREGFRVERGI
CCHHHHCCEEEEEECCCCHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCCEEECCC
AGLPTAFRAETGEGGPVIAFMAEMDALPVMGHACGHNVIAAAAVGAATALRSILPPDAAR
CCCCCHHCCCCCCCCCEEEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCE
IVVLGTPAEEMGIGKVDMIANGAFDGVEFALMVHPSSRRYVIKHYLGLARVRFTFFGKPA
EEEEECCHHHHCCCCEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHEEEEEECCCC
HAAAYPEEGINALDGVIQTFNGISALRQQLRQDVRVHGIITEGGVAPNIIPERASAHFYV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCEEEE
RADDLAELERAKARVLACAEGAALATGCRLQVDADPRIMAPLKVNRIFSDLYSAQLAYLD
ECHHHHHHHHHHHHHHEECCCCEEECCCEEEECCCCCEECCHHHHHHHHHHHHHHEEEEE
LQESENQPDKNKGSSDIGNVSQIVPTIHPHVPIGDGINIHSEAFARATVSGKGKAAVAEG
CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHEEECCCCCEEHHCC
ATALALTAAELAARPDIREEIWREFRS
CHHHHHHHHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 9829935 [H]