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The map label for this gene is mmgC [H]

Identifier: 78224498

GI number: 78224498

Start: 3721550

End: 3722692

Strand: Reverse

Name: mmgC [H]

Synonym: Gmet_3307

Alternate gene names: 78224498

Gene position: 3722692-3721550 (Counterclockwise)

Preceding gene: 78224500

Following gene: 78224497

Centisome position: 93.13

GC content: 63.78

Gene sequence:

>1143_bases
ATGTTTAATACCAGCGAAGAAGTACGCATTGTGACTGAAACCATACGCCAGGCGGCACGGGAACGGATTGCACCGGCGGC
TGCATCCGTCGACGCGACCGGTGAGCTCGACGGCGAGGTGTTGTCGCTGCTGTGGGATCTGGGGCTCATGACCCTGGTGT
TCCCGCCGGAGTTCGGCGGCGCGGAACAGAGCCAGGGGACGCTGCTCTGTACGGCAGTGGAAGAGATCGCGCGCCACTGC
GCCTCATCATCCTTGATGCTGATCATCCAGGCTGTGGGCAGTTTTCCGCTGCTGCACGGCGGCAGCCGGGAACTCCTGGA
GCGGGTGCTCCCCCGGATTGTGGAAAGGCGGGAGTTGGCCGCCTATCTGGTCTCCGAGCCGGGTGCCGGGTCCGATGTCG
GCTCTATCCGCACCACGGCGGTCAGGGATGGCAACGAGTACGTCATCTCCGGCACCAAATGCTTCTCCACCAACGGACCG
GTGGCATCCTACTACACCGTCCTGGCGCGCACCTCCGAGAACGGGCGTAACGGCCTCAGCTTTTTCCTGGTGGATGGCGA
TGCGCCGGGGCTCAAGGTGGGGAAGATCGAGAAGAAGCTGGGCCAGCGCGGGTCCAAGACCTCCGAGATGTATCTCGACG
AAGTGCGGGTTCCGGCCGGTAACCTTCTCGGCGAAGAGAACAAGGGGTTCCTCCTCGCCATGAAGGACTTCGACATGTCC
CGCCCCGCCATCGGCGCCCAGGCCCTCGGCATTGCCGAAGGGGCCTTCGATCAGATGCTGAAGCATTCCCGGGAGCGGAA
GACCTTCGGGCAACCGCTCTGCGAGCACCAGATGATCCAGCAGATCATCGCCGACAGCGCCACCAAGATAGAAGCGGCGC
GCGGCCTCATCTACCGGGCCGCGGCCCTCTACGACCAGGGCAAGCGCAACACCAAGCTCGCCTCCATGGGGAAGCTCTTC
GCCTCCGACGCCGCCATGCAGATCACCACCGACGCCATCCAGGTCTTCGGCGGCTATGGTTACATGCAGGACTACCCGGT
GGAGCGGATGTTCCGGGACGCCAAGCTGACCCAGATATTCGAGGGGGCCAACCAGATCCAGCGGCTGGTCATCGCCCGGG
AGATCCTGAAAGAGGCCGCTTGA

Upstream 100 bases:

>100_bases
TTTACGATGTTGTTGCAGTTGTTGCCTTTGTTGGCACGGGTGTTGGATATAAAGGCGTTATAAAAAATAAATATGCCTGT
GTCGGCATGAGGAGGGACGA

Downstream 100 bases:

>100_bases
ATCCCGGAAAGCGTGAATTTTCGCACTGATAAAAGGAGATATCCCCATGAAACATCTTACCGAAGAACAGAAACTGACGC
TGGACATGGTGCGCGACGTG

Product: Acyl-CoA dehydrogenase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MFNTSEEVRIVTETIRQAARERIAPAAASVDATGELDGEVLSLLWDLGLMTLVFPPEFGGAEQSQGTLLCTAVEEIARHC
ASSSLMLIIQAVGSFPLLHGGSRELLERVLPRIVERRELAAYLVSEPGAGSDVGSIRTTAVRDGNEYVISGTKCFSTNGP
VASYYTVLARTSENGRNGLSFFLVDGDAPGLKVGKIEKKLGQRGSKTSEMYLDEVRVPAGNLLGEENKGFLLAMKDFDMS
RPAIGAQALGIAEGAFDQMLKHSRERKTFGQPLCEHQMIQQIIADSATKIEAARGLIYRAAALYDQGKRNTKLASMGKLF
ASDAAMQITTDAIQVFGGYGYMQDYPVERMFRDAKLTQIFEGANQIQRLVIAREILKEAA

Sequences:

>Translated_380_residues
MFNTSEEVRIVTETIRQAARERIAPAAASVDATGELDGEVLSLLWDLGLMTLVFPPEFGGAEQSQGTLLCTAVEEIARHC
ASSSLMLIIQAVGSFPLLHGGSRELLERVLPRIVERRELAAYLVSEPGAGSDVGSIRTTAVRDGNEYVISGTKCFSTNGP
VASYYTVLARTSENGRNGLSFFLVDGDAPGLKVGKIEKKLGQRGSKTSEMYLDEVRVPAGNLLGEENKGFLLAMKDFDMS
RPAIGAQALGIAEGAFDQMLKHSRERKTFGQPLCEHQMIQQIIADSATKIEAARGLIYRAAALYDQGKRNTKLASMGKLF
ASDAAMQITTDAIQVFGGYGYMQDYPVERMFRDAKLTQIFEGANQIQRLVIAREILKEAA
>Mature_380_residues
MFNTSEEVRIVTETIRQAARERIAPAAASVDATGELDGEVLSLLWDLGLMTLVFPPEFGGAEQSQGTLLCTAVEEIARHC
ASSSLMLIIQAVGSFPLLHGGSRELLERVLPRIVERRELAAYLVSEPGAGSDVGSIRTTAVRDGNEYVISGTKCFSTNGP
VASYYTVLARTSENGRNGLSFFLVDGDAPGLKVGKIEKKLGQRGSKTSEMYLDEVRVPAGNLLGEENKGFLLAMKDFDMS
RPAIGAQALGIAEGAFDQMLKHSRERKTFGQPLCEHQMIQQIIADSATKIEAARGLIYRAAALYDQGKRNTKLASMGKLF
ASDAAMQITTDAIQVFGGYGYMQDYPVERMFRDAKLTQIFEGANQIQRLVIAREILKEAA

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557231, Length=378, Percent_Identity=41.2698412698413, Blast_Score=292, Evalue=4e-79,
Organism=Homo sapiens, GI187960098, Length=378, Percent_Identity=41.2698412698413, Blast_Score=292, Evalue=5e-79,
Organism=Homo sapiens, GI4557233, Length=374, Percent_Identity=39.8395721925134, Blast_Score=254, Evalue=7e-68,
Organism=Homo sapiens, GI4501859, Length=375, Percent_Identity=37.0666666666667, Blast_Score=240, Evalue=1e-63,
Organism=Homo sapiens, GI226958412, Length=378, Percent_Identity=34.1269841269841, Blast_Score=217, Evalue=1e-56,
Organism=Homo sapiens, GI7656849, Length=364, Percent_Identity=34.3406593406593, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI226958414, Length=342, Percent_Identity=34.5029239766082, Blast_Score=202, Evalue=4e-52,
Organism=Homo sapiens, GI4501857, Length=378, Percent_Identity=29.8941798941799, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI21361497, Length=359, Percent_Identity=33.983286908078, Blast_Score=198, Evalue=8e-51,
Organism=Homo sapiens, GI76496475, Length=339, Percent_Identity=32.7433628318584, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI4557235, Length=339, Percent_Identity=32.7433628318584, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI4503943, Length=377, Percent_Identity=26.790450928382, Blast_Score=118, Evalue=7e-27,
Organism=Homo sapiens, GI7669494, Length=363, Percent_Identity=26.4462809917355, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI38505218, Length=351, Percent_Identity=28.2051282051282, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI211971008, Length=295, Percent_Identity=28.4745762711864, Blast_Score=99, Evalue=9e-21,
Organism=Homo sapiens, GI48976061, Length=284, Percent_Identity=28.8732394366197, Blast_Score=99, Evalue=9e-21,
Organism=Escherichia coli, GI87081958, Length=381, Percent_Identity=32.2834645669291, Blast_Score=183, Evalue=2e-47,
Organism=Escherichia coli, GI1786223, Length=380, Percent_Identity=29.2105263157895, Blast_Score=174, Evalue=9e-45,
Organism=Escherichia coli, GI87082384, Length=288, Percent_Identity=29.8611111111111, Blast_Score=104, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI17569725, Length=381, Percent_Identity=39.1076115485564, Blast_Score=274, Evalue=5e-74,
Organism=Caenorhabditis elegans, GI17534899, Length=368, Percent_Identity=39.4021739130435, Blast_Score=273, Evalue=9e-74,
Organism=Caenorhabditis elegans, GI17570075, Length=371, Percent_Identity=36.9272237196765, Blast_Score=258, Evalue=3e-69,
Organism=Caenorhabditis elegans, GI17508101, Length=371, Percent_Identity=36.3881401617251, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI17506239, Length=370, Percent_Identity=35.6756756756757, Blast_Score=225, Evalue=3e-59,
Organism=Caenorhabditis elegans, GI17538396, Length=386, Percent_Identity=32.3834196891192, Blast_Score=208, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI17533517, Length=377, Percent_Identity=32.6259946949602, Blast_Score=207, Evalue=9e-54,
Organism=Caenorhabditis elegans, GI71985184, Length=350, Percent_Identity=33.1428571428571, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI71990804, Length=297, Percent_Identity=35.3535353535354, Blast_Score=170, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI17551932, Length=358, Percent_Identity=31.0055865921788, Blast_Score=167, Evalue=8e-42,
Organism=Caenorhabditis elegans, GI17505929, Length=378, Percent_Identity=31.7460317460317, Blast_Score=165, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI71982178, Length=275, Percent_Identity=31.6363636363636, Blast_Score=153, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI32563615, Length=237, Percent_Identity=37.1308016877637, Blast_Score=142, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI71985192, Length=297, Percent_Identity=30.3030303030303, Blast_Score=134, Evalue=9e-32,
Organism=Caenorhabditis elegans, GI17531909, Length=244, Percent_Identity=32.7868852459016, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17534353, Length=377, Percent_Identity=26.525198938992, Blast_Score=132, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17531913, Length=179, Percent_Identity=32.9608938547486, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17562446, Length=287, Percent_Identity=27.8745644599303, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI86563383, Length=298, Percent_Identity=26.1744966442953, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI86563381, Length=298, Percent_Identity=26.1744966442953, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24660351, Length=383, Percent_Identity=41.5143603133159, Blast_Score=299, Evalue=3e-81,
Organism=Drosophila melanogaster, GI21356377, Length=378, Percent_Identity=37.037037037037, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI24646207, Length=375, Percent_Identity=36.8, Blast_Score=232, Evalue=3e-61,
Organism=Drosophila melanogaster, GI24666513, Length=381, Percent_Identity=34.9081364829396, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI281363737, Length=362, Percent_Identity=33.9779005524862, Blast_Score=198, Evalue=5e-51,
Organism=Drosophila melanogaster, GI21355753, Length=391, Percent_Identity=32.2250639386189, Blast_Score=197, Evalue=7e-51,
Organism=Drosophila melanogaster, GI19920834, Length=284, Percent_Identity=30.6338028169014, Blast_Score=119, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41326; Mature: 41326

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNTSEEVRIVTETIRQAARERIAPAAASVDATGELDGEVLSLLWDLGLMTLVFPPEFGG
CCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCC
AEQSQGTLLCTAVEEIARHCASSSLMLIIQAVGSFPLLHGGSRELLERVLPRIVERRELA
CCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AYLVSEPGAGSDVGSIRTTAVRDGNEYVISGTKCFSTNGPVASYYTVLARTSENGRNGLS
HHHHCCCCCCCCCCCEEEEEEECCCEEEEECCEEECCCCCHHHHHHHHHCCCCCCCCCCE
FFLVDGDAPGLKVGKIEKKLGQRGSKTSEMYLDEVRVPAGNLLGEENKGFLLAMKDFDMS
EEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHCCCCCCCEEEEEECCCCC
RPAIGAQALGIAEGAFDQMLKHSRERKTFGQPLCEHQMIQQIIADSATKIEAARGLIYRA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AALYDQGKRNTKLASMGKLFASDAAMQITTDAIQVFGGYGYMQDYPVERMFRDAKLTQIF
HHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
EGANQIQRLVIAREILKEAA
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFNTSEEVRIVTETIRQAARERIAPAAASVDATGELDGEVLSLLWDLGLMTLVFPPEFGG
CCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCC
AEQSQGTLLCTAVEEIARHCASSSLMLIIQAVGSFPLLHGGSRELLERVLPRIVERRELA
CCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AYLVSEPGAGSDVGSIRTTAVRDGNEYVISGTKCFSTNGPVASYYTVLARTSENGRNGLS
HHHHCCCCCCCCCCCEEEEEEECCCEEEEECCEEECCCCCHHHHHHHHHCCCCCCCCCCE
FFLVDGDAPGLKVGKIEKKLGQRGSKTSEMYLDEVRVPAGNLLGEENKGFLLAMKDFDMS
EEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHCCCCCCCEEEEEECCCCC
RPAIGAQALGIAEGAFDQMLKHSRERKTFGQPLCEHQMIQQIIADSATKIEAARGLIYRA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AALYDQGKRNTKLASMGKLFASDAAMQITTDAIQVFGGYGYMQDYPVERMFRDAKLTQIF
HHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
EGANQIQRLVIAREILKEAA
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]