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The map label for this gene is 78224416

Identifier: 78224416

GI number: 78224416

Start: 3628008

End: 3629708

Strand: Direct

Name: 78224416

Synonym: Gmet_3225

Alternate gene names: NA

Gene position: 3628008-3629708 (Clockwise)

Preceding gene: 78224415

Following gene: 78224419

Centisome position: 90.76

GC content: 61.85

Gene sequence:

>1701_bases
ATGACATCACGCACCTACATGAGTTTTTGCGCCGCCTTTACCCTCTGGGGACTTCTCGGACCGCTGCAGGCTGGAACCGC
CCAGGCTGCCTCCCCCTCCTTCGAACTGGAGCTGAAGGACCTGGAAACGACGAAGCCTTCCCCCCAACACCGGCGGCAAC
CCGTCCGCCCCCCCCGCAAGGATAGTGCCCGGAAACCAGACACCAAGCCGGACACCCCAGCCTCAGAAGCATCCGGCGAC
TATACCCGCTATACCGTCAGGCCCGGCGACTTTCTCTTTAAGATCCTGATCCGCGATTTCGGCCTCAGCAACGCCCAGGC
CGAGGCGCTCATCCCGGAAATCCAACGAATCAACAAATTGCCGAGCACCACGCGCCTCGAGGTGGGACAGACCATCCTCA
TTCCCCGTCACCGCCGGGCATCATCCCTGGCTAAGGCCGCTACACCTGCACCCACTCCGGCATCCACGCATGGATCCGCA
TCTGCACCGGAAGGACACCGCCCCCTCATCATCCCGCCTGCTCCGTCATCGGCGCCGGCTCCCTCCACCGTCGTCACCTC
GCCCCCTGAGCCGGTGGCGTCCTCACAACATGAAACAGCAACGGAAACGGTGGCGTCGCCTCCGCCGCCACCGCCACTCA
CACTATCGGGCCATGAAACTGTGTCGCCTGCACCAGCCACGGAAGCAAAGGCTGACCTTTCCTTTTCCACGGCACTTATC
CGTCTGTGGGAAAACCTCGTTCCCGGCCAGCGGCAAATCGAACCTTTGACCGTCAACGGGAAGGTTCTCGACCCGGCCGA
CTACCCGCTCCTCCTGGCTGCCGATGGAGGCCGGATTCTGGTGGATCTCCGGGGCACCCTCCAACCCCAGCTTCGTACTC
AATTGGCTCAAAAGTACCCCGACATCCACATTGTCACCCGGGGCAACGATAGCCTCAAGACGCTCGTCGCAACCCTCGTG
CGAGCAGCCGAGTTCGCCCGGGCAGAAGAGAACGTGGCCGTCGACCTGGGAGCTGATCCCACCCTCTCCGTCCGGGCAGA
CTTCCGCATCGTGAGGCTTCCGACGGGCCGGGGGGGGCCCGAAACCGTCCTCGTCTTTCTGGACGAACATGGCCCCTGCC
TTCCTCCCCCCCTCACCGATTACCTCCATCGGAAAGGTTACCAGGTGGCCCAGTTCTGCGACCGTCCGGGAGACACCGTT
GCCGAGCCGGGGTACGACCTCAGGGCCATCCCTCCTTCCACACCTTGCGATGTGGCGGTTTCGCTTCTTAACGCACTTTC
CCTGAAACTGGACCGCAACCGTATCGTTTCCGGGGCCATGGGAGAGAACTCGGAGAACCGGTTCAGCATCAGGGTAGAAG
GATACTTCGAGGCGGGGGGAAAGCGCTTTATCCTCGATTGCTCAGGAAACGATCCCTACAACTACACCCTCTTCAGGCTC
CTCCAGGTGCAGGGTTACGGCATCATCCAACCCCAGGAGAACGATGATTTCACCGACGTAACGCGGCGTCTGCTCACTGA
GCTCAACTACCCCAACTCATTTGGAAGGCATGAAATGGACTACGGGCGGTACAGGATCGCGATCACCGGCTTCAAGATTA
CCCGCCGCGATACGTCAGCCGGCCGTCTCCTGCTCACGTCCCGGCCATCCGACCCGGTATTTGCCGAGTTGCTGCGGTGG
GCTCCGGCTGAGAGGAAATAA

Upstream 100 bases:

>100_bases
GGGCCGGCTCGTTGTCTACCGTACGGTTCCCAAAGGCGCCATCAGGGCCTTCGTCGTCCACTTCAACTGATTACTCCTTA
CCGAGGATACGGACTCTTCC

Downstream 100 bases:

>100_bases
AGGGCCCTGGGGTAAGCAACGCCGCCATGGTGCACGGGCGATGATTACAGACTATCGGGAGGGGATTTTTCGATCAAAGG
AAACGGGCGCGGCATCACGG

Product: peptidoglycan-binding LysM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 565

Protein sequence:

>566_residues
MTSRTYMSFCAAFTLWGLLGPLQAGTAQAASPSFELELKDLETTKPSPQHRRQPVRPPRKDSARKPDTKPDTPASEASGD
YTRYTVRPGDFLFKILIRDFGLSNAQAEALIPEIQRINKLPSTTRLEVGQTILIPRHRRASSLAKAATPAPTPASTHGSA
SAPEGHRPLIIPPAPSSAPAPSTVVTSPPEPVASSQHETATETVASPPPPPPLTLSGHETVSPAPATEAKADLSFSTALI
RLWENLVPGQRQIEPLTVNGKVLDPADYPLLLAADGGRILVDLRGTLQPQLRTQLAQKYPDIHIVTRGNDSLKTLVATLV
RAAEFARAEENVAVDLGADPTLSVRADFRIVRLPTGRGGPETVLVFLDEHGPCLPPPLTDYLHRKGYQVAQFCDRPGDTV
AEPGYDLRAIPPSTPCDVAVSLLNALSLKLDRNRIVSGAMGENSENRFSIRVEGYFEAGGKRFILDCSGNDPYNYTLFRL
LQVQGYGIIQPQENDDFTDVTRRLLTELNYPNSFGRHEMDYGRYRIAITGFKITRRDTSAGRLLLTSRPSDPVFAELLRW
APAERK

Sequences:

>Translated_566_residues
MTSRTYMSFCAAFTLWGLLGPLQAGTAQAASPSFELELKDLETTKPSPQHRRQPVRPPRKDSARKPDTKPDTPASEASGD
YTRYTVRPGDFLFKILIRDFGLSNAQAEALIPEIQRINKLPSTTRLEVGQTILIPRHRRASSLAKAATPAPTPASTHGSA
SAPEGHRPLIIPPAPSSAPAPSTVVTSPPEPVASSQHETATETVASPPPPPPLTLSGHETVSPAPATEAKADLSFSTALI
RLWENLVPGQRQIEPLTVNGKVLDPADYPLLLAADGGRILVDLRGTLQPQLRTQLAQKYPDIHIVTRGNDSLKTLVATLV
RAAEFARAEENVAVDLGADPTLSVRADFRIVRLPTGRGGPETVLVFLDEHGPCLPPPLTDYLHRKGYQVAQFCDRPGDTV
AEPGYDLRAIPPSTPCDVAVSLLNALSLKLDRNRIVSGAMGENSENRFSIRVEGYFEAGGKRFILDCSGNDPYNYTLFRL
LQVQGYGIIQPQENDDFTDVTRRLLTELNYPNSFGRHEMDYGRYRIAITGFKITRRDTSAGRLLLTSRPSDPVFAELLRW
APAERK
>Mature_565_residues
TSRTYMSFCAAFTLWGLLGPLQAGTAQAASPSFELELKDLETTKPSPQHRRQPVRPPRKDSARKPDTKPDTPASEASGDY
TRYTVRPGDFLFKILIRDFGLSNAQAEALIPEIQRINKLPSTTRLEVGQTILIPRHRRASSLAKAATPAPTPASTHGSAS
APEGHRPLIIPPAPSSAPAPSTVVTSPPEPVASSQHETATETVASPPPPPPLTLSGHETVSPAPATEAKADLSFSTALIR
LWENLVPGQRQIEPLTVNGKVLDPADYPLLLAADGGRILVDLRGTLQPQLRTQLAQKYPDIHIVTRGNDSLKTLVATLVR
AAEFARAEENVAVDLGADPTLSVRADFRIVRLPTGRGGPETVLVFLDEHGPCLPPPLTDYLHRKGYQVAQFCDRPGDTVA
EPGYDLRAIPPSTPCDVAVSLLNALSLKLDRNRIVSGAMGENSENRFSIRVEGYFEAGGKRFILDCSGNDPYNYTLFRLL
QVQGYGIIQPQENDDFTDVTRRLLTELNYPNSFGRHEMDYGRYRIAITGFKITRRDTSAGRLLLTSRPSDPVFAELLRWA
PAERK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61815; Mature: 61684

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRTYMSFCAAFTLWGLLGPLQAGTAQAASPSFELELKDLETTKPSPQHRRQPVRPPRK
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCC
DSARKPDTKPDTPASEASGDYTRYTVRPGDFLFKILIRDFGLSNAQAEALIPEIQRINKL
CCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
PSTTRLEVGQTILIPRHRRASSLAKAATPAPTPASTHGSASAPEGHRPLIIPPAPSSAPA
CCCCEEECCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
PSTVVTSPPEPVASSQHETATETVASPPPPPPLTLSGHETVSPAPATEAKADLSFSTALI
CCCEECCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHH
RLWENLVPGQRQIEPLTVNGKVLDPADYPLLLAADGGRILVDLRGTLQPQLRTQLAQKYP
HHHHHHCCCCCCCCEEEECCEEECCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHCC
DIHIVTRGNDSLKTLVATLVRAAEFARAEENVAVDLGADPTLSVRADFRIVRLPTGRGGP
CEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECEEEEEECCCCCCC
ETVLVFLDEHGPCLPPPLTDYLHRKGYQVAQFCDRPGDTVAEPGYDLRAIPPSTPCDVAV
CEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHH
SLLNALSLKLDRNRIVSGAMGENSENRFSIRVEGYFEAGGKRFILDCSGNDPYNYTLFRL
HHHHHHHHEECCHHEEECCCCCCCCCEEEEEEEEEEECCCCEEEEECCCCCCCCHHEEEE
LQVQGYGIIQPQENDDFTDVTRRLLTELNYPNSFGRHEMDYGRYRIAITGFKITRRDTSA
EECCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCC
GRLLLTSRPSDPVFAELLRWAPAERK
CEEEEECCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TSRTYMSFCAAFTLWGLLGPLQAGTAQAASPSFELELKDLETTKPSPQHRRQPVRPPRK
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCC
DSARKPDTKPDTPASEASGDYTRYTVRPGDFLFKILIRDFGLSNAQAEALIPEIQRINKL
CCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
PSTTRLEVGQTILIPRHRRASSLAKAATPAPTPASTHGSASAPEGHRPLIIPPAPSSAPA
CCCCEEECCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
PSTVVTSPPEPVASSQHETATETVASPPPPPPLTLSGHETVSPAPATEAKADLSFSTALI
CCCEECCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHH
RLWENLVPGQRQIEPLTVNGKVLDPADYPLLLAADGGRILVDLRGTLQPQLRTQLAQKYP
HHHHHHCCCCCCCCEEEECCEEECCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHCC
DIHIVTRGNDSLKTLVATLVRAAEFARAEENVAVDLGADPTLSVRADFRIVRLPTGRGGP
CEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECEEEEEECCCCCCC
ETVLVFLDEHGPCLPPPLTDYLHRKGYQVAQFCDRPGDTVAEPGYDLRAIPPSTPCDVAV
CEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHH
SLLNALSLKLDRNRIVSGAMGENSENRFSIRVEGYFEAGGKRFILDCSGNDPYNYTLFRL
HHHHHHHHEECCHHEEECCCCCCCCCEEEEEEEEEEECCCCEEEEECCCCCCCCHHEEEE
LQVQGYGIIQPQENDDFTDVTRRLLTELNYPNSFGRHEMDYGRYRIAITGFKITRRDTSA
EECCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCC
GRLLLTSRPSDPVFAELLRWAPAERK
CEEEEECCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA