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The map label for this gene is cheD2

Identifier: 78224400

GI number: 78224400

Start: 3608388

End: 3608876

Strand: Reverse

Name: cheD2

Synonym: Gmet_3209

Alternate gene names: 78224400

Gene position: 3608876-3608388 (Counterclockwise)

Preceding gene: 78224401

Following gene: 78224399

Centisome position: 90.28

GC content: 62.37

Gene sequence:

>489_bases
TTGAGCAAGATTATCAGCGTCGGCATATCGGAGCACAAGGTTGCATCTGACCCGGTGGTCCTTGTGACCTACGGGCTCGG
CTCCTGCGTCGGCATCGCCCTCTACGATCCCGAAGTCCGGATCGGCGGGCTTGCACATACCCTGTTGCCCGCCCCTGTCC
GCGAAGTGCAAGGTGCGGAAAGGACAGCCAAATTCACCTGCTGGGCCGTCGATCTCATGGTGGAGGAACTCCTTAAATGC
GGTTGCGCCCCTGAGCGACTTGTGGCAAAATTGGCCGGCGGTGCCACCATGTTCGAACCCCAGTACCGCTCGGCCCACGG
CGGCATCGGCGAGCGCAATGTTGCGGCGGCCAGGGAAGCCCTGGAGCGGAGCGGCATCCCCCTTGTGGCCGAGGATACGG
GGGGGGACTACGGGCGGAGCCTGGAGTTCAATACAGCAACCGGGATCATCATGGTCAGGGCGCTGCAGCAGCCCATAAAG
CAACTTTAG

Upstream 100 bases:

>100_bases
CCGACTTTTTTGGAGAGGAGGAGAAGATCAACGGCCAGTTTTTCCTCCTTCCCGACCCCGAGTCCCTGAAGATAATCCTC
AACGCCATAGGGGTGAAACT

Downstream 100 bases:

>100_bases
CGGTCGCGCGGAGGGGGCATGAAGATTTACAGGCTCGTCATCGTGGTATTCCTGGCGCTTTTTGTAGGGGCGGTTCCCGC
CACGGCGGCACCGGTGGCTA

Product: CheD, stimulates methylation of MCP proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MSKIISVGISEHKVASDPVVLVTYGLGSCVGIALYDPEVRIGGLAHTLLPAPVREVQGAERTAKFTCWAVDLMVEELLKC
GCAPERLVAKLAGGATMFEPQYRSAHGGIGERNVAAAREALERSGIPLVAEDTGGDYGRSLEFNTATGIIMVRALQQPIK
QL

Sequences:

>Translated_162_residues
MSKIISVGISEHKVASDPVVLVTYGLGSCVGIALYDPEVRIGGLAHTLLPAPVREVQGAERTAKFTCWAVDLMVEELLKC
GCAPERLVAKLAGGATMFEPQYRSAHGGIGERNVAAAREALERSGIPLVAEDTGGDYGRSLEFNTATGIIMVRALQQPIK
QL
>Mature_161_residues
SKIISVGISEHKVASDPVVLVTYGLGSCVGIALYDPEVRIGGLAHTLLPAPVREVQGAERTAKFTCWAVDLMVEELLKCG
CAPERLVAKLAGGATMFEPQYRSAHGGIGERNVAAAREALERSGIPLVAEDTGGDYGRSLEFNTATGIIMVRALQQPIKQ
L

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CHED2_GEOMG (Q39QQ2)

Other databases:

- EMBL:   CP000148
- RefSeq:   YP_386147.1
- HSSP:   Q9X005
- ProteinModelPortal:   Q39QQ2
- SMR:   Q39QQ2
- STRING:   Q39QQ2
- GeneID:   3740964
- GenomeReviews:   CP000148_GR
- KEGG:   gme:Gmet_3209
- NMPDR:   fig|269799.3.peg.2443
- eggNOG:   COG1871
- HOGENOM:   HBG531149
- OMA:   KVGIGDY
- ProtClustDB:   CLSK743191
- BioCyc:   GMET269799:GMET_3209-MONOMER
- GO:   GO:0006935
- HAMAP:   MF_01440
- InterPro:   IPR005659

Pfam domain/function: PF03975 CheD

EC number: =3.5.1.44

Molecular weight: Translated: 17190; Mature: 17059

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIISVGISEHKVASDPVVLVTYGLGSCVGIALYDPEVRIGGLAHTLLPAPVREVQGAE
CCCEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEECCHHHHHCCCCHHHHCCCC
RTAKFTCWAVDLMVEELLKCGCAPERLVAKLAGGATMFEPQYRSAHGGIGERNVAAAREA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEECCCHHCCCCCCCCCHHHHHHHH
LERSGIPLVAEDTGGDYGRSLEFNTATGIIMVRALQQPIKQL
HHHCCCCEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKIISVGISEHKVASDPVVLVTYGLGSCVGIALYDPEVRIGGLAHTLLPAPVREVQGAE
CCEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEECCHHHHHCCCCHHHHCCCC
RTAKFTCWAVDLMVEELLKCGCAPERLVAKLAGGATMFEPQYRSAHGGIGERNVAAAREA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEECCCHHCCCCCCCCCHHHHHHHH
LERSGIPLVAEDTGGDYGRSLEFNTATGIIMVRALQQPIKQL
HHHCCCCEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA