| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78224351
Identifier: 78224351
GI number: 78224351
Start: 3557975
End: 3559693
Strand: Direct
Name: 78224351
Synonym: Gmet_3160
Alternate gene names: NA
Gene position: 3557975-3559693 (Clockwise)
Preceding gene: 78224350
Following gene: 78224352
Centisome position: 89.01
GC content: 68.35
Gene sequence:
>1719_bases ATGATCATCACCCAGGACATAGCCCGGATCGCCCAGGCCCTCCTCAAAGACACCACCGGTTCCCTGGTGGAGGCCACCTG GCAGTCCCTTACCCCCCTTAACCTCACGCCGGGACAGATGGTCCACGGCGAGGTCATGGCGAACTTCGCCAACAGCCGCT ACCTGGTGAGAATCGCCAACGAGCTCCTCCACATGGAGCTTCCCCTCAACCTCCAGCCGGGCCAGGCAGTGGAGCTCACC TACGTCACCGACGAGCCCCGGCTGGTCTTTTCCCTGTCGAAGTCGGGCAATTCCGCGACGCCCGTCCAGATCAGCGACAC AGGGCGCTGGCTCAACACCCTGGCCCAGGGGACCGGCGGCACACAGGCCGCGAGCTCTCTCCCCCGCCCTTCCCTCGTAA TCTCGGGCCCTCCCCGGGACCCGGCCCTCCTGGCCGAGGGGTTGAAGAACGTCCTCAGCCGGAGCGGAGTCTTCTACGAA TCCCACCTGGCCCAGTGGGTGCAGGGGGAATATCCCCTTACCGACCTCCTCCGGGAGCCCCAGGGGCAACTCTCCCCCCT TGCCGGCCGGCTCCCGGCCGAGGGAAACGGGGCAACCACGACACTTCATGGCGTCCGGGTTTCTCCTGGCGAGACGCCAC CGGCGCCGGCGCCTCCAGCTGTGACGCCAGGACTACCTCTCGAGGAAGGCGTCACTCCACCCCCCCCACGAACCATCGCG GAGGGGAGTCCGTCCGCACCAGGGAACGCCGCCCCCGACGCGGCACCCCGGCAGGGGGAAACTCCGCCCTCTCCCGACAC CCCGAAAGGGGGCCAGACGACCTCAGCAGCGCCCCGAGACCCCCTTCCCCAAACGGCTATTTCGCCCCAGAACCAGCCCC AGGCCCCGGGACGGCCAGGAGCGCCTGCACCTCTCCCTGCGGAGCCTCAGGGAGGCGTGGCCACGACCTCACCAGACCCC GAGACCGTCGACGCACCGCCGGCCGCCCCGCAAAACGCAGCGGCACCGACCGGAGCCCCCCTGCCAAAATCTGTTGGTGA GGTTCCCGGTCAACAGCTTGCAACGACGGTTCTCCAGGGGGGGCAGCCACCTCAACCGCGGGACACCGTTGTCCCGAACC CTACGGAATTCGGGCACCCCGCCCCGGCATCATCACCGGACGCACGCCCCCAGACAGAAGGCCACCCACAGTCCCTCCTT AGGGACGGAGCAGCAGCCACATCCCCCGGCAGGGCGTCCTCTCCTCCCCCCCTCCCCGGAACGCCGGAGGGAGGAGCACG AGTTGTAATTCCCGGAGAGACCGCGCCAACCAGCCGGGGCGCAATGGGCCGGCTGGGGGAGCCACCGCCTCCCGCAGGCA TTGAGTCCCAGACCATCCCCATCATCAAGGAGCAGCTCACCACCCTCACCACCGGCGTCTTCACCTGGTTCGGCCAGGCC TGGCCCGGCCAGGACATGGAATGGAAGGTGGAGGAGCGGGAGGCGGAAGGGGGTAAGGGGGAGCGGTCGTGGCTGACCGA GGTGGCCGTGGAGTTGCCAAGCCTGGGGGCTGTCCGGGCAACCCTCCGTGCGGGAAAGGAGGGGATCGGTGTGACCCTGG TTGCGGAAGACGGACGGACGGCGGAGATTCTTGCGGCAGGGCAGAATGGCCTTGATGAGCGGTTCGACGCCGCAGGGCTG CGGCTCGGCGGTTTTACGGTGAGAGATGGATCACAGTGA
Upstream 100 bases:
>100_bases GTGAAGACCGGGACCGGGGATCGGGGATCGGAAACATCCCGGTCGCGCAGCCTGGGGTCTCTCCCTTCAAGTTTCTGCCG TTTCGGCCGATACGTATGAC
Downstream 100 bases:
>100_bases GCGGGAAAAAAAGGCGGTGGCCCTCTCCTACCGGGAGGGGCAGTATGCGCCGCAGGTGGTGGCAAAGGGGCACGGTGTGA CCGCCGAGGCGATCATCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 572; Mature: 572
Protein sequence:
>572_residues MIITQDIARIAQALLKDTTGSLVEATWQSLTPLNLTPGQMVHGEVMANFANSRYLVRIANELLHMELPLNLQPGQAVELT YVTDEPRLVFSLSKSGNSATPVQISDTGRWLNTLAQGTGGTQAASSLPRPSLVISGPPRDPALLAEGLKNVLSRSGVFYE SHLAQWVQGEYPLTDLLREPQGQLSPLAGRLPAEGNGATTTLHGVRVSPGETPPAPAPPAVTPGLPLEEGVTPPPPRTIA EGSPSAPGNAAPDAAPRQGETPPSPDTPKGGQTTSAAPRDPLPQTAISPQNQPQAPGRPGAPAPLPAEPQGGVATTSPDP ETVDAPPAAPQNAAAPTGAPLPKSVGEVPGQQLATTVLQGGQPPQPRDTVVPNPTEFGHPAPASSPDARPQTEGHPQSLL RDGAAATSPGRASSPPPLPGTPEGGARVVIPGETAPTSRGAMGRLGEPPPPAGIESQTIPIIKEQLTTLTTGVFTWFGQA WPGQDMEWKVEEREAEGGKGERSWLTEVAVELPSLGAVRATLRAGKEGIGVTLVAEDGRTAEILAAGQNGLDERFDAAGL RLGGFTVRDGSQ
Sequences:
>Translated_572_residues MIITQDIARIAQALLKDTTGSLVEATWQSLTPLNLTPGQMVHGEVMANFANSRYLVRIANELLHMELPLNLQPGQAVELT YVTDEPRLVFSLSKSGNSATPVQISDTGRWLNTLAQGTGGTQAASSLPRPSLVISGPPRDPALLAEGLKNVLSRSGVFYE SHLAQWVQGEYPLTDLLREPQGQLSPLAGRLPAEGNGATTTLHGVRVSPGETPPAPAPPAVTPGLPLEEGVTPPPPRTIA EGSPSAPGNAAPDAAPRQGETPPSPDTPKGGQTTSAAPRDPLPQTAISPQNQPQAPGRPGAPAPLPAEPQGGVATTSPDP ETVDAPPAAPQNAAAPTGAPLPKSVGEVPGQQLATTVLQGGQPPQPRDTVVPNPTEFGHPAPASSPDARPQTEGHPQSLL RDGAAATSPGRASSPPPLPGTPEGGARVVIPGETAPTSRGAMGRLGEPPPPAGIESQTIPIIKEQLTTLTTGVFTWFGQA WPGQDMEWKVEEREAEGGKGERSWLTEVAVELPSLGAVRATLRAGKEGIGVTLVAEDGRTAEILAAGQNGLDERFDAAGL RLGGFTVRDGSQ >Mature_572_residues MIITQDIARIAQALLKDTTGSLVEATWQSLTPLNLTPGQMVHGEVMANFANSRYLVRIANELLHMELPLNLQPGQAVELT YVTDEPRLVFSLSKSGNSATPVQISDTGRWLNTLAQGTGGTQAASSLPRPSLVISGPPRDPALLAEGLKNVLSRSGVFYE SHLAQWVQGEYPLTDLLREPQGQLSPLAGRLPAEGNGATTTLHGVRVSPGETPPAPAPPAVTPGLPLEEGVTPPPPRTIA EGSPSAPGNAAPDAAPRQGETPPSPDTPKGGQTTSAAPRDPLPQTAISPQNQPQAPGRPGAPAPLPAEPQGGVATTSPDP ETVDAPPAAPQNAAAPTGAPLPKSVGEVPGQQLATTVLQGGQPPQPRDTVVPNPTEFGHPAPASSPDARPQTEGHPQSLL RDGAAATSPGRASSPPPLPGTPEGGARVVIPGETAPTSRGAMGRLGEPPPPAGIESQTIPIIKEQLTTLTTGVFTWFGQA WPGQDMEWKVEEREAEGGKGERSWLTEVAVELPSLGAVRATLRAGKEGIGVTLVAEDGRTAEILAAGQNGLDERFDAAGL RLGGFTVRDGSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58943; Mature: 58943
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIITQDIARIAQALLKDTTGSLVEATWQSLTPLNLTPGQMVHGEVMANFANSRYLVRIAN CCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEHHHHHH ELLHMELPLNLQPGQAVELTYVTDEPRLVFSLSKSGNSATPVQISDTGRWLNTLAQGTGG HHHEEECCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCEEECCCHHHHHHHHCCCCC TQAASSLPRPSLVISGPPRDPALLAEGLKNVLSRSGVFYESHLAQWVQGEYPLTDLLREP CHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCC QGQLSPLAGRLPAEGNGATTTLHGVRVSPGETPPAPAPPAVTPGLPLEEGVTPPPPRTIA CCCCCCHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC EGSPSAPGNAAPDAAPRQGETPPSPDTPKGGQTTSAAPRDPLPQTAISPQNQPQAPGRPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APAPLPAEPQGGVATTSPDPETVDAPPAAPQNAAAPTGAPLPKSVGEVPGQQLATTVLQG CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHC GQPPQPRDTVVPNPTEFGHPAPASSPDARPQTEGHPQSLLRDGAAATSPGRASSPPPLPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC TPEGGARVVIPGETAPTSRGAMGRLGEPPPPAGIESQTIPIIKEQLTTLTTGVFTWFGQA CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC WPGQDMEWKVEEREAEGGKGERSWLTEVAVELPSLGAVRATLRAGKEGIGVTLVAEDGRT CCCCCCCEEEHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCCE AEILAAGQNGLDERFDAAGLRLGGFTVRDGSQ EEEEECCCCCHHHHHHHCCEEECCEEECCCCC >Mature Secondary Structure MIITQDIARIAQALLKDTTGSLVEATWQSLTPLNLTPGQMVHGEVMANFANSRYLVRIAN CCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEHHHHHH ELLHMELPLNLQPGQAVELTYVTDEPRLVFSLSKSGNSATPVQISDTGRWLNTLAQGTGG HHHEEECCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCEEECCCHHHHHHHHCCCCC TQAASSLPRPSLVISGPPRDPALLAEGLKNVLSRSGVFYESHLAQWVQGEYPLTDLLREP CHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCC QGQLSPLAGRLPAEGNGATTTLHGVRVSPGETPPAPAPPAVTPGLPLEEGVTPPPPRTIA CCCCCCHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC EGSPSAPGNAAPDAAPRQGETPPSPDTPKGGQTTSAAPRDPLPQTAISPQNQPQAPGRPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APAPLPAEPQGGVATTSPDPETVDAPPAAPQNAAAPTGAPLPKSVGEVPGQQLATTVLQG CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHC GQPPQPRDTVVPNPTEFGHPAPASSPDARPQTEGHPQSLLRDGAAATSPGRASSPPPLPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC TPEGGARVVIPGETAPTSRGAMGRLGEPPPPAGIESQTIPIIKEQLTTLTTGVFTWFGQA CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC WPGQDMEWKVEEREAEGGKGERSWLTEVAVELPSLGAVRATLRAGKEGIGVTLVAEDGRT CCCCCCCEEEHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCCE AEILAAGQNGLDERFDAAGLRLGGFTVRDGSQ EEEEECCCCCHHHHHHHCCEEECCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA