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The map label for this gene is yqhM [H]

Identifier: 78224342

GI number: 78224342

Start: 3546483

End: 3547325

Strand: Reverse

Name: yqhM [H]

Synonym: Gmet_3151

Alternate gene names: 78224342

Gene position: 3547325-3546483 (Counterclockwise)

Preceding gene: 78224343

Following gene: 78224341

Centisome position: 88.74

GC content: 65.6

Gene sequence:

>843_bases
ATGTCTGCTACTTTGGCTGCTGATGGTTCTCCCAACCTGACCCGCTGGCGCCTCGTGGACACCGGCCCCCTGGACGGCCC
CGCCAACATGGCGGTGGACGAGGCGCTTCTTCTCCATTTCGACCCTGCTGCATCGCTGCCGGTGCTCCGCCTCTACGGGT
GGGAGCCACCGGCTTTTTCCGTAGGGCGGTTCCAGCGGGCCGAGGATGCGCTTCACCTGGAGCGGTGCGCGGCCGCCGGC
ATTCCCGTGGTGCGGCGGATCACCGGCGGCGGGGTTATCTACCACGCCGCAGAGTTGACCTATGCCGTGGTCTGCGCCCC
GCGCCATATTTCCGACGCACAGGGAGTCAAGGAATCGTTTCGGGCCCTCACCGGCTTCCTCATTCGCTTTTACGGTACTC
TCGGGTTCGAGGCATCCTGGGCCGTGGATTCCCAACCGCCAGGGAAGCGCTTAGGCGTGCGAACTCCCCTTTGTTTTGCC
GGCCAGGAAGAATACGATATCGTTTCCGGCGGGAGAAAGATCGGCGGCAACGCCCAGCGGCGGCTGAAGGATGTGATCTT
CCAACATGGCTCGGTGCCGTTGCGTTGCGCCCTGGCCGAGGCACTTCCCTTTTTCCGCCAGCCTCCCGCCGGCCTCCTGG
AGGGGGCCGCGAGCCTTGCCCAACTGGGGGTGACGGCTGATTCGGCATGGTTGCGGGAGCGGCTTGTCGCCGCTTTTGCT
GAAAGCCTCGGCGTCGACCTCGTTCTTGCGGTCCTCACCGCCGAGGAAGAGGCGACCGCGGCCCGCCTCGGCGCGGAGCG
TTACGGGAAAGCTGCCTGGAACCTGCACGGAGAAACGCCATGA

Upstream 100 bases:

>100_bases
GCGGCGGAACTGGCCGAGTCCGATCCGGCCGCCTTTGCCGAGATGCCCCGGACCATGCCGGTCACCCGCCTCGACGAGAC
CAAGGCGGCCCGGGAGCAGA

Downstream 100 bases:

>100_bases
CCATCGTCCGCAAGCCCCAGTGGCTGCAAAAGAAGATCAACCCCGCGGCCCACGCCGGCATGGAGGGGCTTCTGGGGGAG
CTGCGCCTTCACACGGTCTG

Product: biotin/lipoate A/B protein ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MSATLAADGSPNLTRWRLVDTGPLDGPANMAVDEALLLHFDPAASLPVLRLYGWEPPAFSVGRFQRAEDALHLERCAAAG
IPVVRRITGGGVIYHAAELTYAVVCAPRHISDAQGVKESFRALTGFLIRFYGTLGFEASWAVDSQPPGKRLGVRTPLCFA
GQEEYDIVSGGRKIGGNAQRRLKDVIFQHGSVPLRCALAEALPFFRQPPAGLLEGAASLAQLGVTADSAWLRERLVAAFA
ESLGVDLVLAVLTAEEEATAARLGAERYGKAAWNLHGETP

Sequences:

>Translated_280_residues
MSATLAADGSPNLTRWRLVDTGPLDGPANMAVDEALLLHFDPAASLPVLRLYGWEPPAFSVGRFQRAEDALHLERCAAAG
IPVVRRITGGGVIYHAAELTYAVVCAPRHISDAQGVKESFRALTGFLIRFYGTLGFEASWAVDSQPPGKRLGVRTPLCFA
GQEEYDIVSGGRKIGGNAQRRLKDVIFQHGSVPLRCALAEALPFFRQPPAGLLEGAASLAQLGVTADSAWLRERLVAAFA
ESLGVDLVLAVLTAEEEATAARLGAERYGKAAWNLHGETP
>Mature_279_residues
SATLAADGSPNLTRWRLVDTGPLDGPANMAVDEALLLHFDPAASLPVLRLYGWEPPAFSVGRFQRAEDALHLERCAAAGI
PVVRRITGGGVIYHAAELTYAVVCAPRHISDAQGVKESFRALTGFLIRFYGTLGFEASWAVDSQPPGKRLGVRTPLCFAG
QEEYDIVSGGRKIGGNAQRRLKDVIFQHGSVPLRCALAEALPFFRQPPAGLLEGAASLAQLGVTADSAWLRERLVAAFAE
SLGVDLVLAVLTAEEEATAARLGAERYGKAAWNLHGETP

Specific function: Unknown

COG id: COG0095

COG function: function code H; Lipoate-protein ligase A

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004143 [H]

Pfam domain/function: PF03099 BPL_LipA_LipB [H]

EC number: NA

Molecular weight: Translated: 29912; Mature: 29781

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATLAADGSPNLTRWRLVDTGPLDGPANMAVDEALLLHFDPAASLPVLRLYGWEPPAFS
CCCEECCCCCCCCEEEEEEECCCCCCCCCHHHHHEEEEEECCCCCCCEEEEECCCCCCCC
VGRFQRAEDALHLERCAAAGIPVVRRITGGGVIYHAAELTYAVVCAPRHISDAQGVKESF
HHHHHHHHHHHHHHHHHHCCCHHHEEECCCCEEEEHHHHEEEEEECCCCCCHHHHHHHHH
RALTGFLIRFYGTLGFEASWAVDSQPPGKRLGVRTPLCFAGQEEYDIVSGGRKIGGNAQR
HHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEECCCCCCCHHCCCCCCCCHHHH
RLKDVIFQHGSVPLRCALAEALPFFRQPPAGLLEGAASLAQLGVTADSAWLRERLVAAFA
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ESLGVDLVLAVLTAEEEATAARLGAERYGKAAWNLHGETP
HHHCHHHHHHHHHCCHHHHHHHHHHHHHCCEEEECCCCCC
>Mature Secondary Structure 
SATLAADGSPNLTRWRLVDTGPLDGPANMAVDEALLLHFDPAASLPVLRLYGWEPPAFS
CCEECCCCCCCCEEEEEEECCCCCCCCCHHHHHEEEEEECCCCCCCEEEEECCCCCCCC
VGRFQRAEDALHLERCAAAGIPVVRRITGGGVIYHAAELTYAVVCAPRHISDAQGVKESF
HHHHHHHHHHHHHHHHHHCCCHHHEEECCCCEEEEHHHHEEEEEECCCCCCHHHHHHHHH
RALTGFLIRFYGTLGFEASWAVDSQPPGKRLGVRTPLCFAGQEEYDIVSGGRKIGGNAQR
HHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEECCCCCCCHHCCCCCCCCHHHH
RLKDVIFQHGSVPLRCALAEALPFFRQPPAGLLEGAASLAQLGVTADSAWLRERLVAAFA
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ESLGVDLVLAVLTAEEEATAARLGAERYGKAAWNLHGETP
HHHCHHHHHHHHHCCHHHHHHHHHHHHHCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]