| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is actP [H]
Identifier: 78224224
GI number: 78224224
Start: 3416291
End: 3417820
Strand: Reverse
Name: actP [H]
Synonym: Gmet_3031
Alternate gene names: 78224224
Gene position: 3417820-3416291 (Counterclockwise)
Preceding gene: 78224225
Following gene: 78224223
Centisome position: 85.5
GC content: 64.31
Gene sequence:
>1530_bases ATGACTGACGCGGGGCCCAATCTCATACCCCTCATCATTGTCACCCTTGCCCTTGCCTCCTTCATCGTGGCGGGGCTCCG CGCCCGGGCCCGGAGCGCCAGCGATTACGGCATCGGTGGCCGCTACATCGGCCGGATCGGCGGCGGGGCCGCCATCGCCA GCAACTGGATGAGCGCTGCGAGCCTCCTCGGCATGGGGGGACTCCTCTACCTCCACGGGTATTACGCCCTGGCCTACGTG ATCGGCTGGACCGGCGGGTACGTACTCCTTCTGGTCCTCATGGCGGGACAGATCCGGCGTTTCGGCAAGTACACGGCGCC GGACTTCGTGGGGGACCGTTACGCGTCGCCCATGGCAGGTCTCATCTCCGCCGGCATCTCCATCACCATCTCGATCATCT ACTGCACGGCCCAGTTCAAGGGGATCGGGATGCTCTTCGGCTGGCTCTTCGGCACCGGCTATCGCAACGGCGTGATCCTG GGAGCCGTCGTGGTGGTTGGGTACGTGATCATCTCGGGGGTGCTGGGTGTGGCCCGCAACCAGCAACTCCAGTACACGCT TCTCATTGTCTCCTTCATTCTCCCCCTCATGGTGCTGGCGTACAAGCTCGGCTACTTCTGGGTTCTCCCCCAGTTCGGCT ATGGGGTGGCCATCCAGGACCTGAAACGGGAGTTCGGCATCAACTTCGCTGCCCCCTTTGCCTCGGGTTCCCTCTTTCAG TGGATATCCCTCTGCTTCACCCTCATGGTGGGGACCGCAGGGCTCCCCCACGTGCTGTCGCGCTTCTACGTGGTCCCCAA CATCCGGGACGCCCGGTGGAGCCTCGTGTGGGGGCTCTTCTTCATCGCCCTCATCTACTGGTCGGCTCCGGCCTACGCCG TCTTTGCCCGGCTTCTGGAGGCCCGAGCCGGAATGACCCTTCCGCCTGCCGCGGCCGAGAAAATGGCCGACCTTATCGTT ATAAGGACAGCGGTCATGGGGGGGCTTCCCCCGTGGATGATCGGGATTCTCGCCGCCGGGGCCGTGAGCGCCGCCTTTTT CACCGTGGCCGGGCTCCTCATCACCGGCGCCTCCTCTTTTTCCCACGACATCTACTACCGTTTCATCAACCCCCGGGCGT CGGAGACCACCAAGATGGCCCTCTCCAAAGCGGCGGTGGTGGCCCTGGCCGTGGTGGTGCTGGTGATCGCCATGGACCCG CCGGGACTCATCGCCGAGATTACCGCCGTGGCCTTTGCCCTGGCCGGCAATACCATTTTCCCCGCGTTCCTCCTGGGTAT CTGGTGGGGGCGGGCCAACCGCCACGGGGTTATCGCAGGGATGCTGACCGGGGTCGTCATTACCTTTTCGACTCCCCTAT TCGGCCGTTTTCTGCCGGTAGTGGCGGATATTTTCCCCCTTACCTCGTCGGCCTTTTTCGGCGCGCCGGCCGTTATCGCC GTAATGGTAGCGGTGTCGCTCCTGACCCCTCCGCCCCCTGAAGAGGTCCGGCGGTTCCTGGCCGAGCAGGTTCACGGCCA CATGGACTGA
Upstream 100 bases:
>100_bases GCCCAGTTTCTCCCCCTCTGGTTCATCATTCTCTGCATCCTCTTCAATATTTACATCGACCGGCACACGGAGCAGCACAG CAGAAGGAAGGATCGAAGCC
Downstream 100 bases:
>100_bases CTATGACGGTAAAGGAGCTGTGACATGGCGCTGTTACTAGGTGCGAGGGGGGAGGATATCCTTACCCGGCGCGGGACCGC CGAGTTCATCGAGCAGGTGC
Product: Na+/solute symporter
Products: NA
Alternate protein names: Acetate permease; Acetate transporter ActP [H]
Number of amino acids: Translated: 509; Mature: 508
Protein sequence:
>509_residues MTDAGPNLIPLIIVTLALASFIVAGLRARARSASDYGIGGRYIGRIGGGAAIASNWMSAASLLGMGGLLYLHGYYALAYV IGWTGGYVLLLVLMAGQIRRFGKYTAPDFVGDRYASPMAGLISAGISITISIIYCTAQFKGIGMLFGWLFGTGYRNGVIL GAVVVVGYVIISGVLGVARNQQLQYTLLIVSFILPLMVLAYKLGYFWVLPQFGYGVAIQDLKREFGINFAAPFASGSLFQ WISLCFTLMVGTAGLPHVLSRFYVVPNIRDARWSLVWGLFFIALIYWSAPAYAVFARLLEARAGMTLPPAAAEKMADLIV IRTAVMGGLPPWMIGILAAGAVSAAFFTVAGLLITGASSFSHDIYYRFINPRASETTKMALSKAAVVALAVVVLVIAMDP PGLIAEITAVAFALAGNTIFPAFLLGIWWGRANRHGVIAGMLTGVVITFSTPLFGRFLPVVADIFPLTSSAFFGAPAVIA VMVAVSLLTPPPPEEVRRFLAEQVHGHMD
Sequences:
>Translated_509_residues MTDAGPNLIPLIIVTLALASFIVAGLRARARSASDYGIGGRYIGRIGGGAAIASNWMSAASLLGMGGLLYLHGYYALAYV IGWTGGYVLLLVLMAGQIRRFGKYTAPDFVGDRYASPMAGLISAGISITISIIYCTAQFKGIGMLFGWLFGTGYRNGVIL GAVVVVGYVIISGVLGVARNQQLQYTLLIVSFILPLMVLAYKLGYFWVLPQFGYGVAIQDLKREFGINFAAPFASGSLFQ WISLCFTLMVGTAGLPHVLSRFYVVPNIRDARWSLVWGLFFIALIYWSAPAYAVFARLLEARAGMTLPPAAAEKMADLIV IRTAVMGGLPPWMIGILAAGAVSAAFFTVAGLLITGASSFSHDIYYRFINPRASETTKMALSKAAVVALAVVVLVIAMDP PGLIAEITAVAFALAGNTIFPAFLLGIWWGRANRHGVIAGMLTGVVITFSTPLFGRFLPVVADIFPLTSSAFFGAPAVIA VMVAVSLLTPPPPEEVRRFLAEQVHGHMD >Mature_508_residues TDAGPNLIPLIIVTLALASFIVAGLRARARSASDYGIGGRYIGRIGGGAAIASNWMSAASLLGMGGLLYLHGYYALAYVI GWTGGYVLLLVLMAGQIRRFGKYTAPDFVGDRYASPMAGLISAGISITISIIYCTAQFKGIGMLFGWLFGTGYRNGVILG AVVVVGYVIISGVLGVARNQQLQYTLLIVSFILPLMVLAYKLGYFWVLPQFGYGVAIQDLKREFGINFAAPFASGSLFQW ISLCFTLMVGTAGLPHVLSRFYVVPNIRDARWSLVWGLFFIALIYWSAPAYAVFARLLEARAGMTLPPAAAEKMADLIVI RTAVMGGLPPWMIGILAAGAVSAAFFTVAGLLITGASSFSHDIYYRFINPRASETTKMALSKAAVVALAVVVLVIAMDPP GLIAEITAVAFALAGNTIFPAFLLGIWWGRANRHGVIAGMLTGVVITFSTPLFGRFLPVVADIFPLTSSAFFGAPAVIAV MVAVSLLTPPPPEEVRRFLAEQVHGHMD
Specific function: Transports acetate [H]
COG id: COG4147
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=492, Percent_Identity=23.9837398373984, Blast_Score=86, Evalue=6e-17, Organism=Escherichia coli, GI1790503, Length=469, Percent_Identity=30.7036247334755, Blast_Score=151, Evalue=8e-38, Organism=Escherichia coli, GI1787251, Length=496, Percent_Identity=25.8064516129032, Blast_Score=108, Evalue=9e-25, Organism=Escherichia coli, GI87082237, Length=455, Percent_Identity=21.3186813186813, Blast_Score=69, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014083 - InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 54262; Mature: 54131
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAGPNLIPLIIVTLALASFIVAGLRARARSASDYGIGGRYIGRIGGGAAIASNWMSAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHH SLLGMGGLLYLHGYYALAYVIGWTGGYVLLLVLMAGQIRRFGKYTAPDFVGDRYASPMAG HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHH LISAGISITISIIYCTAQFKGIGMLFGWLFGTGYRNGVILGAVVVVGYVIISGVLGVARN HHHCCCEEEEEEEEEECHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC QQLQYTLLIVSFILPLMVLAYKLGYFWVLPQFGYGVAIQDLKREFGINFAAPFASGSLFQ CCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCCEECCCCCCCHHH WISLCFTLMVGTAGLPHVLSRFYVVPNIRDARWSLVWGLFFIALIYWSAPAYAVFARLLE HHHHHHHHHHCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH ARAGMTLPPAAAEKMADLIVIRTAVMGGLPPWMIGILAAGAVSAAFFTVAGLLITGASSF HHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH SHDIYYRFINPRASETTKMALSKAAVVALAVVVLVIAMDPPGLIAEITAVAFALAGNTIF CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHH PAFLLGIWWGRANRHGVIAGMLTGVVITFSTPLFGRFLPVVADIFPLTSSAFFGAPAVIA HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHCCHHHHHH VMVAVSLLTPPPPEEVRRFLAEQVHGHMD HHHHHHHCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure TDAGPNLIPLIIVTLALASFIVAGLRARARSASDYGIGGRYIGRIGGGAAIASNWMSAA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHH SLLGMGGLLYLHGYYALAYVIGWTGGYVLLLVLMAGQIRRFGKYTAPDFVGDRYASPMAG HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHH LISAGISITISIIYCTAQFKGIGMLFGWLFGTGYRNGVILGAVVVVGYVIISGVLGVARN HHHCCCEEEEEEEEEECHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC QQLQYTLLIVSFILPLMVLAYKLGYFWVLPQFGYGVAIQDLKREFGINFAAPFASGSLFQ CCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCCEECCCCCCCHHH WISLCFTLMVGTAGLPHVLSRFYVVPNIRDARWSLVWGLFFIALIYWSAPAYAVFARLLE HHHHHHHHHHCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH ARAGMTLPPAAAEKMADLIVIRTAVMGGLPPWMIGILAAGAVSAAFFTVAGLLITGASSF HHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH SHDIYYRFINPRASETTKMALSKAAVVALAVVVLVIAMDPPGLIAEITAVAFALAGNTIF CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHH PAFLLGIWWGRANRHGVIAGMLTGVVITFSTPLFGRFLPVVADIFPLTSSAFFGAPAVIA HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHCCHHHHHH VMVAVSLLTPPPPEEVRRFLAEQVHGHMD HHHHHHHCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA