Click here to switch to the map view.

The map label for this gene is 78224197

Identifier: 78224197

GI number: 78224197

Start: 3389300

End: 3390010

Strand: Reverse

Name: 78224197

Synonym: Gmet_3004

Alternate gene names: NA

Gene position: 3390010-3389300 (Counterclockwise)

Preceding gene: 78224198

Following gene: 78224196

Centisome position: 84.8

GC content: 50.21

Gene sequence:

>711_bases
ATGGCCCACAGTTATCAAGTCTTCATATCGTTCAAGAATTCTGATGAGCAAGGACTACCAACGCGTGACAGCCAGCTTGC
GGATCTTCTCTACCGGGAGTTTACAAGTCGCGGCTTGGATGTGTTCTACAGCAACCTTTCCCTTCCTCGCCTTGGAGAGT
CTGAGTACAAGAAGTGCATAGACGATGCATTGGATTCAAGTACCGTACTCATTGCTGTGGGGACATCACGCGAGAATCTT
GAGTCTAAATGGGTACGTTACGAGTGGGATAGCTTTTACAACGATGTCTTGAGTGGCGTAAAGCCGCAAGGGAGGCTTTT
CGTCTACTACGAAAAGATGAGCACAAAGGAGTTACCTCGAACGCTCCGACAGAATCAAGCATTCCCACACGGGTTAGACC
ATCTGAATGAGCTCTCTGAGTACATAATGCGTGCTCTTCCTGCTTCTCCTGTTCCGAAATTTCAGGATTTAGCGATCTGC
ACCAACTGTGGCCACCAATTTGATCAGCGGGATCCTCCGCATTGCTCCTACCATCCGGAACCGGCTCTTCACGTCAAAAG
CCTGGGTGCCCGAGATGACTACAGGGAAGTCTATAGATTCCCCTGCTGTGACAGTTTCGCGTTCGCGGCAATTGACTGGG
CTAGGGGTGGCACAGACGTTCCGCCTTCCAGATTTCCAGGTTGTAAACAAGGACGCTGTATTGCTGGCTAA

Upstream 100 bases:

>100_bases
TACCTTTTGCTAGAGGACGGCTGCCCAACTGACACTTCCAGGGGACCGTCGCTATCGCGCCGGCCCCTGAAGCGAGACGT
TAGCCCGATAGAGTTTAAAT

Downstream 100 bases:

>100_bases
CATTTACTTCCAGGGGACCGTCGCTATCGCTCCGGCCCCTGAAGCCTGACGTTATGCTTATTATTAAGAATATAGCCTCG
TCCGCAGAATCTGTGGGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MAHSYQVFISFKNSDEQGLPTRDSQLADLLYREFTSRGLDVFYSNLSLPRLGESEYKKCIDDALDSSTVLIAVGTSRENL
ESKWVRYEWDSFYNDVLSGVKPQGRLFVYYEKMSTKELPRTLRQNQAFPHGLDHLNELSEYIMRALPASPVPKFQDLAIC
TNCGHQFDQRDPPHCSYHPEPALHVKSLGARDDYREVYRFPCCDSFAFAAIDWARGGTDVPPSRFPGCKQGRCIAG

Sequences:

>Translated_236_residues
MAHSYQVFISFKNSDEQGLPTRDSQLADLLYREFTSRGLDVFYSNLSLPRLGESEYKKCIDDALDSSTVLIAVGTSRENL
ESKWVRYEWDSFYNDVLSGVKPQGRLFVYYEKMSTKELPRTLRQNQAFPHGLDHLNELSEYIMRALPASPVPKFQDLAIC
TNCGHQFDQRDPPHCSYHPEPALHVKSLGARDDYREVYRFPCCDSFAFAAIDWARGGTDVPPSRFPGCKQGRCIAG
>Mature_235_residues
AHSYQVFISFKNSDEQGLPTRDSQLADLLYREFTSRGLDVFYSNLSLPRLGESEYKKCIDDALDSSTVLIAVGTSRENLE
SKWVRYEWDSFYNDVLSGVKPQGRLFVYYEKMSTKELPRTLRQNQAFPHGLDHLNELSEYIMRALPASPVPKFQDLAICT
NCGHQFDQRDPPHCSYHPEPALHVKSLGARDDYREVYRFPCCDSFAFAAIDWARGGTDVPPSRFPGCKQGRCIAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26921; Mature: 26790

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHSYQVFISFKNSDEQGLPTRDSQLADLLYREFTSRGLDVFYSNLSLPRLGESEYKKCI
CCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHH
DDALDSSTVLIAVGTSRENLESKWVRYEWDSFYNDVLSGVKPQGRLFVYYEKMSTKELPR
HHHCCCCEEEEEECCCHHHHHHHHHEEHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHH
TLRQNQAFPHGLDHLNELSEYIMRALPASPVPKFQDLAICTNCGHQFDQRDPPHCSYHPE
HHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
PALHVKSLGARDDYREVYRFPCCDSFAFAAIDWARGGTDVPPSRFPGCKQGRCIAG
CCHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AHSYQVFISFKNSDEQGLPTRDSQLADLLYREFTSRGLDVFYSNLSLPRLGESEYKKCI
CCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHH
DDALDSSTVLIAVGTSRENLESKWVRYEWDSFYNDVLSGVKPQGRLFVYYEKMSTKELPR
HHHCCCCEEEEEECCCHHHHHHHHHEEHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHH
TLRQNQAFPHGLDHLNELSEYIMRALPASPVPKFQDLAICTNCGHQFDQRDPPHCSYHPE
HHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
PALHVKSLGARDDYREVYRFPCCDSFAFAAIDWARGGTDVPPSRFPGCKQGRCIAG
CCHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA