Click here to switch to the map view.

The map label for this gene is 78224141

Identifier: 78224141

GI number: 78224141

Start: 3335818

End: 3336261

Strand: Reverse

Name: 78224141

Synonym: Gmet_2945

Alternate gene names: NA

Gene position: 3336261-3335818 (Counterclockwise)

Preceding gene: 78224142

Following gene: 78224139

Centisome position: 83.46

GC content: 63.51

Gene sequence:

>444_bases
ATGGAAACGTCACGTGTTGAAGAATGGTTTGAGCGGGGGGTAGAGGCCCTGGGGCATGACCAGGTCTATCTGGCGCGGAG
CTGTTTCGAGCACGTTGCTCGGGTGAATCAGCATCCCGCCGCCAGTTCGTACCTTGCCCTTTGTCAGGCGAAAACCCGCG
GGAAGTTCAGCGACGCCATTGCGCTGGCCCGGGAGTCCATTGCCCGTGAGCCCCACAATCCGCTCCTCTATCAGAACCTT
GGCCGCATCTATCAGTTGGCCGGCATGAGGATGGATGCGGTGGAGGTCCTGCGCGAGGGGGTACGGCGCGGGGCCGGGGA
GGAGGCCGTTGCCGAACTGAACCGGATCGGCACCCGGAAGCAGCCGCCCTTCCGACGGCTCCATCGCAATCATCCCCTCA
ACAAGTATGTGGGGAAGCTCCTGGCGCGGCTCAGGCTGCGGTAG

Upstream 100 bases:

>100_bases
TGGCGGGTTGGGAGATATCGTTATATCGCTGGCTTGAATCTTGAATTAGGCAGGTTGAATCAAGTTCTGTCAGGGTTGCA
ACGGAACCGCGAGGCGCATC

Downstream 100 bases:

>100_bases
ACGGGGAGAATAAGCAAAGGGCGTCCGGATGGCCGGGCGCCCTTTGCTTTTTAGGTCTGCTAGAAGACAAAACCGAGGGT
TACCTGGAATTTGTCGTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: Dihydrofolate Reductase; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Domain Protein; TPR Domain-Containing Protein

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
METSRVEEWFERGVEALGHDQVYLARSCFEHVARVNQHPAASSYLALCQAKTRGKFSDAIALARESIAREPHNPLLYQNL
GRIYQLAGMRMDAVEVLREGVRRGAGEEAVAELNRIGTRKQPPFRRLHRNHPLNKYVGKLLARLRLR

Sequences:

>Translated_147_residues
METSRVEEWFERGVEALGHDQVYLARSCFEHVARVNQHPAASSYLALCQAKTRGKFSDAIALARESIAREPHNPLLYQNL
GRIYQLAGMRMDAVEVLREGVRRGAGEEAVAELNRIGTRKQPPFRRLHRNHPLNKYVGKLLARLRLR
>Mature_147_residues
METSRVEEWFERGVEALGHDQVYLARSCFEHVARVNQHPAASSYLALCQAKTRGKFSDAIALARESIAREPHNPLLYQNL
GRIYQLAGMRMDAVEVLREGVRRGAGEEAVAELNRIGTRKQPPFRRLHRNHPLNKYVGKLLARLRLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16829; Mature: 16829

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METSRVEEWFERGVEALGHDQVYLARSCFEHVARVNQHPAASSYLALCQAKTRGKFSDAI
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHH
ALARESIAREPHNPLLYQNLGRIYQLAGMRMDAVEVLREGVRRGAGEEAVAELNRIGTRK
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
QPPFRRLHRNHPLNKYVGKLLARLRLR
CCHHHHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
METSRVEEWFERGVEALGHDQVYLARSCFEHVARVNQHPAASSYLALCQAKTRGKFSDAI
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHH
ALARESIAREPHNPLLYQNLGRIYQLAGMRMDAVEVLREGVRRGAGEEAVAELNRIGTRK
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
QPPFRRLHRNHPLNKYVGKLLARLRLR
CCHHHHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA