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The map label for this gene is 78224093

Identifier: 78224093

GI number: 78224093

Start: 3279565

End: 3280656

Strand: Reverse

Name: 78224093

Synonym: Gmet_2897

Alternate gene names: NA

Gene position: 3280656-3279565 (Counterclockwise)

Preceding gene: 78224094

Following gene: 78224092

Centisome position: 82.07

GC content: 55.86

Gene sequence:

>1092_bases
ATGAAAACAATACGAAGCATCGGTAGATTTGCTGTGCTGGCGGCCATGGCGGCGCTCTTTGCCGGGTGTGCCGGGCAGCA
GGTGAAGAGTGAGCAGCGCTTTTTCTGGCCGCCTCTGCCCGAGCGGCCCCGCATCGAGTGGCTGAATGCCTACAGCAGTC
AGAACGATTTTCCGAAGAGTGCCACTGAGAAGTTCTTGACGACTATTATTGGTGAAGAAGAAGGGATATCACTCTCCAAG
CCGATCACCGTCCGTTCCGATGGCCGGGGCAAGGTCTACGTGGGTGACCCGGGGGCGCCGGGAGTCTATGTGTTCGATTT
TGTAAACAATATCATGCGACCCTTTGGCAAGGCCGAGGCCGAGGCACGCATTGAGCAGCCGGTCGGAATTGCCATCGACG
AAAACGGACGTATTTATGTCTCCGACACGAAGAAGGCTGCCATTATGGTGTTCCATCAGGATGAAACCCCGGCAGCGCTT
ATCAATTTGAAGGGAATGGTTGAAAAGATAGGGGACATTGCCTATGACCGGATCGGGAAACACCTCCTGGCGTTGGACGT
GCGCGGGCATAAGGTGCTGGTGTTGTCCCTGAGAGGAGAGCTTCTTTCAAGCTTTGGCAACCGCGGCACCAAGCCCGGCG
AATTCAACTTCCCCAGTGCGCTGACCGTTAACAACAAAGGCGAGATCATTGTGGCGGATGCCATGAATGCCCGCATCCAG
ATCTTCTCCAGCGATGGCAAATTCCTCAGGATGTTCGGCCAGCGGGGGGATTCGCCCGGGACCCTGCAACTGATCAAGGG
GGTTGCGGTTGATTCCGACGACAACATCTACGTAACCGACGGCAAGGGGCATAAGTTCGAGATCTTCAGCACGACGGGCG
ATTATCTGCTGACGGTTGGGGGGGCCTTCTCGGCGCTTACCACCGGCAAGACCGCGCCCGGCGGATTTGTCATCCCCCAG
GGGATCGACATCGACAAGGACAACATGATTTATGTGGTTGATCAACTCAACCGCCGTTTTCAGGTATTTCGCTATATTTC
CGATTCCTATCTGAAGGCGAATCCCATCCCCGGCTACACCCCTTCTCCCTGA

Upstream 100 bases:

>100_bases
CCAGATGTGTCATAATAAGTGAGGCCGGGACTGGGGATTGGGGACCAGGGACCGGGAAAGCCAGTACTGCTCAGTAAATC
TCATGGAGTGAGGGGAAAAT

Downstream 100 bases:

>100_bases
TGGCAGAAGCGGCCCTCCACCACGTTACTCTGGGTGGTGGAGGGCCGCATTGTGCCGCTCAAATCTCTCTTCTCCACCTT
TCCAGCCTGCCGGATCCTGT

Product: NHL repeat-containing protein

Products: NA

Alternate protein names: NHL Repeat-Containing Protein; NHL Repeat Protein; PA14 Domain-Containing Protein; Fibronectin Type III Domain Protein; Tetratricopeptide Repeat-Containing Protein; SMP-30/Gluconolaconase/LRE Domain Protein; NHL Repeat Domain-Containing Protein; PKD Domain Containing Protein; Cell Surface Protein; NHL Repeat Domain Protein; Surface Layer Protein

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MKTIRSIGRFAVLAAMAALFAGCAGQQVKSEQRFFWPPLPERPRIEWLNAYSSQNDFPKSATEKFLTTIIGEEEGISLSK
PITVRSDGRGKVYVGDPGAPGVYVFDFVNNIMRPFGKAEAEARIEQPVGIAIDENGRIYVSDTKKAAIMVFHQDETPAAL
INLKGMVEKIGDIAYDRIGKHLLALDVRGHKVLVLSLRGELLSSFGNRGTKPGEFNFPSALTVNNKGEIIVADAMNARIQ
IFSSDGKFLRMFGQRGDSPGTLQLIKGVAVDSDDNIYVTDGKGHKFEIFSTTGDYLLTVGGAFSALTTGKTAPGGFVIPQ
GIDIDKDNMIYVVDQLNRRFQVFRYISDSYLKANPIPGYTPSP

Sequences:

>Translated_363_residues
MKTIRSIGRFAVLAAMAALFAGCAGQQVKSEQRFFWPPLPERPRIEWLNAYSSQNDFPKSATEKFLTTIIGEEEGISLSK
PITVRSDGRGKVYVGDPGAPGVYVFDFVNNIMRPFGKAEAEARIEQPVGIAIDENGRIYVSDTKKAAIMVFHQDETPAAL
INLKGMVEKIGDIAYDRIGKHLLALDVRGHKVLVLSLRGELLSSFGNRGTKPGEFNFPSALTVNNKGEIIVADAMNARIQ
IFSSDGKFLRMFGQRGDSPGTLQLIKGVAVDSDDNIYVTDGKGHKFEIFSTTGDYLLTVGGAFSALTTGKTAPGGFVIPQ
GIDIDKDNMIYVVDQLNRRFQVFRYISDSYLKANPIPGYTPSP
>Mature_363_residues
MKTIRSIGRFAVLAAMAALFAGCAGQQVKSEQRFFWPPLPERPRIEWLNAYSSQNDFPKSATEKFLTTIIGEEEGISLSK
PITVRSDGRGKVYVGDPGAPGVYVFDFVNNIMRPFGKAEAEARIEQPVGIAIDENGRIYVSDTKKAAIMVFHQDETPAAL
INLKGMVEKIGDIAYDRIGKHLLALDVRGHKVLVLSLRGELLSSFGNRGTKPGEFNFPSALTVNNKGEIIVADAMNARIQ
IFSSDGKFLRMFGQRGDSPGTLQLIKGVAVDSDDNIYVTDGKGHKFEIFSTTGDYLLTVGGAFSALTTGKTAPGGFVIPQ
GIDIDKDNMIYVVDQLNRRFQVFRYISDSYLKANPIPGYTPSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32454739, Length=264, Percent_Identity=29.1666666666667, Blast_Score=122, Evalue=7e-28,
Organism=Homo sapiens, GI32454737, Length=264, Percent_Identity=29.1666666666667, Blast_Score=122, Evalue=7e-28,
Organism=Homo sapiens, GI194248079, Length=264, Percent_Identity=26.5151515151515, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI194248081, Length=264, Percent_Identity=26.5151515151515, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI84993742, Length=310, Percent_Identity=28.3870967741935, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17553622, Length=204, Percent_Identity=31.3725490196078, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71980713, Length=241, Percent_Identity=29.4605809128631, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71980716, Length=241, Percent_Identity=29.4605809128631, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17554338, Length=141, Percent_Identity=29.7872340425532, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24655386, Length=221, Percent_Identity=33.0316742081448, Blast_Score=125, Evalue=4e-29,
Organism=Drosophila melanogaster, GI22024206, Length=221, Percent_Identity=33.0316742081448, Blast_Score=125, Evalue=4e-29,
Organism=Drosophila melanogaster, GI221330419, Length=221, Percent_Identity=33.0316742081448, Blast_Score=125, Evalue=4e-29,
Organism=Drosophila melanogaster, GI221330033, Length=236, Percent_Identity=26.6949152542373, Blast_Score=92, Evalue=7e-19,
Organism=Drosophila melanogaster, GI221330031, Length=236, Percent_Identity=26.6949152542373, Blast_Score=92, Evalue=7e-19,
Organism=Drosophila melanogaster, GI24586266, Length=236, Percent_Identity=26.6949152542373, Blast_Score=92, Evalue=7e-19,
Organism=Drosophila melanogaster, GI24586264, Length=236, Percent_Identity=26.6949152542373, Blast_Score=92, Evalue=7e-19,
Organism=Drosophila melanogaster, GI22026822, Length=236, Percent_Identity=26.6949152542373, Blast_Score=92, Evalue=7e-19,
Organism=Drosophila melanogaster, GI45552407, Length=244, Percent_Identity=23.7704918032787, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI19549884, Length=244, Percent_Identity=23.7704918032787, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17136846, Length=244, Percent_Identity=23.7704918032787, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39712; Mature: 39712

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51125 NHL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIRSIGRFAVLAAMAALFAGCAGQQVKSEQRFFWPPLPERPRIEWLNAYSSQNDFPKS
CCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCEECCCCCCCCCHHHHHHHCCCCCCCHH
ATEKFLTTIIGEEEGISLSKPITVRSDGRGKVYVGDPGAPGVYVFDFVNNIMRPFGKAEA
HHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEECCCCCCCEEHHHHHHHHHHHCCCCCH
EARIEQPVGIAIDENGRIYVSDTKKAAIMVFHQDETPAALINLKGMVEKIGDIAYDRIGK
HHHHCCCEEEEECCCCEEEEECCCCEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHCC
HLLALDVRGHKVLVLSLRGELLSSFGNRGTKPGEFNFPSALTVNNKGEIIVADAMNARIQ
EEEEEEECCCEEEEEEECHHHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCEEE
IFSSDGKFLRMFGQRGDSPGTLQLIKGVAVDSDDNIYVTDGKGHKFEIFSTTGDYLLTVG
EECCCCCEEHHHHCCCCCCCCEEEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEC
GAFSALTTGKTAPGGFVIPQGIDIDKDNMIYVVDQLNRRFQVFRYISDSYLKANPIPGYT
CCHHHHCCCCCCCCCEECCCCCCCCCCCEEEEEEHHCHHHHHHHHHHHCCEECCCCCCCC
PSP
CCC
>Mature Secondary Structure
MKTIRSIGRFAVLAAMAALFAGCAGQQVKSEQRFFWPPLPERPRIEWLNAYSSQNDFPKS
CCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCEECCCCCCCCCHHHHHHHCCCCCCCHH
ATEKFLTTIIGEEEGISLSKPITVRSDGRGKVYVGDPGAPGVYVFDFVNNIMRPFGKAEA
HHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEECCCCCCCEEHHHHHHHHHHHCCCCCH
EARIEQPVGIAIDENGRIYVSDTKKAAIMVFHQDETPAALINLKGMVEKIGDIAYDRIGK
HHHHCCCEEEEECCCCEEEEECCCCEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHCC
HLLALDVRGHKVLVLSLRGELLSSFGNRGTKPGEFNFPSALTVNNKGEIIVADAMNARIQ
EEEEEEECCCEEEEEEECHHHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCEEE
IFSSDGKFLRMFGQRGDSPGTLQLIKGVAVDSDDNIYVTDGKGHKFEIFSTTGDYLLTVG
EECCCCCEEHHHHCCCCCCCCEEEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEC
GAFSALTTGKTAPGGFVIPQGIDIDKDNMIYVVDQLNRRFQVFRYISDSYLKANPIPGYT
CCHHHHCCCCCCCCCEECCCCCCCCCCCEEEEEEHHCHHHHHHHHHHHCCEECCCCCCCC
PSP
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA