Click here to switch to the map view.

The map label for this gene is 78224079

Identifier: 78224079

GI number: 78224079

Start: 3264165

End: 3265241

Strand: Direct

Name: 78224079

Synonym: Gmet_2883

Alternate gene names: NA

Gene position: 3264165-3265241 (Clockwise)

Preceding gene: 78224071

Following gene: 78224105

Centisome position: 81.66

GC content: 58.4

Gene sequence:

>1077_bases
ATGCGCGGCGCCGAGACAAAAACCGAAGCTCTGTTCTGTTATCTCTCCCCTGAGTCGTACGTCCCGAAGGACCACCCCTT
GCGGTCGATCAGGGCGATGGTGGATAAGGCCCTTGCAGAGCTCAGCCCGCAATTCGAGGCCATGTACTCCCACACCGGCC
GGCCCTCGATTCCTCCTGAGCAGTTGCTTAAAGCACTTCTGCTTCAGGCGCTGTACACCATCAGGAGTAACCGTCTGCTG
GTGGAGCAGATCAGCTACAGCATCCTGTTCCGCTGGTTTGTGGGATTGGCCCTGGACGAGAAGGTCTGGGACCACTCCTC
GTTTTCCACCAACCTGGAGCGGTTGATCGATACCGACGTGGCACGGCTGCTCTTGGCAAAAGTAGTTGAGCAGGCCCGAA
GGGCAAAGCTGTTGTCCGACGAGCACTTCAGCGTTGACGGCACCCTCATCGAGGCGTGGGCTTCTATCAAGAGCTTTCGG
CCCAAGGATGGACCAAAGCCTCCAGTGGGTCGTAACACGGAGCGTGATTTCCACGGCGAAAAGCTCAAAAACGACACCCA
TGCCTCCACCACCGATCCGGATGCGCGGATTGCCAGGAGAAGCTCGGGCAAAGAGGCGAAGCTCAGTTACCACGGGCACG
CTCTCATGGAGAACCGCAACGGGATCATCGTCGATGCCAGAATCACCCACGCAACCGGTACCGCTGAGCGGGATACCGCA
GTCGAGATGATCGCAGACGTCGCCGGTAACAAGCGGATCACCATGGGCGGCGACAAGGGCTACGACACCAAAGAGTGCGT
CAAAGATCTGCGAGCACTCAAGGTAACCCCTCACATTGCTCAGAACACCGCTAACCGCCGCTCAGCCATCGATGGCAGGA
CTACCCGCCACGAAGGCTACAAAACCAGCCTGAGGATTCGCAAGCGGATCGAAGAGGCCTTCGGCTGGCTCAAGACTGTC
GGCAATCTCCGCAAGACCCGGCATCGGGGAATAGCGAAAGTCGACTGGTACTTCACCATGGCCATTGCGGCATACAATCT
GGTCCGGCTGCGCAATCTCGGGACGAAAACGGCATAA

Upstream 100 bases:

>100_bases
CCTAGCAGGTTGTTGAAAAACTAAACCTTTTTGATTCAATAAGTTAGCGAACTGTGCTATATTTTTACGCGTAACAATCT
GAATTTACAGGAGAAAAGTT

Downstream 100 bases:

>100_bases
TCAGGGGAATAATGCGACTCTTGGTGGCAAAGCCCGCCCGAAAAGGCCAAATCAAGGTAAAAAGCAAAGTTTCAAAGAAC
GAATAGGGCGAGATCAATGC

Product: transposase IS4

Products: NA

Alternate protein names: Transposase IS4 Family Protein; ISBma2 Transposase; ISGsu3 Transposase; IS4 Family Transposase; IS5 Family Transposase N-Terminal Domain Protein; Transposase Is4 Family Protein; ISPsy22 Transposase Truncated; Transposase Or Inactivated Derivative; Transposase And Inactivated Derivative; IS5 Family Transposase; ISMca1 Transposase; IS5 Family Transposase N-Terminal Domain; Transposase IS4 Family; Transposase Fragment IS5 Family; Transposase For IS; Acyl-CoA N-Acyltransferase Domain; Transposase-Related Protein; Transposase Mutator Type; ISGsu2 Transposase; Prevent-Host-Death Family Protein; Transposase For Insertion Sequence NGRIS-8b; Transposase Fragment

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MRGAETKTEALFCYLSPESYVPKDHPLRSIRAMVDKALAELSPQFEAMYSHTGRPSIPPEQLLKALLLQALYTIRSNRLL
VEQISYSILFRWFVGLALDEKVWDHSSFSTNLERLIDTDVARLLLAKVVEQARRAKLLSDEHFSVDGTLIEAWASIKSFR
PKDGPKPPVGRNTERDFHGEKLKNDTHASTTDPDARIARRSSGKEAKLSYHGHALMENRNGIIVDARITHATGTAERDTA
VEMIADVAGNKRITMGGDKGYDTKECVKDLRALKVTPHIAQNTANRRSAIDGRTTRHEGYKTSLRIRKRIEEAFGWLKTV
GNLRKTRHRGIAKVDWYFTMAIAAYNLVRLRNLGTKTA

Sequences:

>Translated_358_residues
MRGAETKTEALFCYLSPESYVPKDHPLRSIRAMVDKALAELSPQFEAMYSHTGRPSIPPEQLLKALLLQALYTIRSNRLL
VEQISYSILFRWFVGLALDEKVWDHSSFSTNLERLIDTDVARLLLAKVVEQARRAKLLSDEHFSVDGTLIEAWASIKSFR
PKDGPKPPVGRNTERDFHGEKLKNDTHASTTDPDARIARRSSGKEAKLSYHGHALMENRNGIIVDARITHATGTAERDTA
VEMIADVAGNKRITMGGDKGYDTKECVKDLRALKVTPHIAQNTANRRSAIDGRTTRHEGYKTSLRIRKRIEEAFGWLKTV
GNLRKTRHRGIAKVDWYFTMAIAAYNLVRLRNLGTKTA
>Mature_358_residues
MRGAETKTEALFCYLSPESYVPKDHPLRSIRAMVDKALAELSPQFEAMYSHTGRPSIPPEQLLKALLLQALYTIRSNRLL
VEQISYSILFRWFVGLALDEKVWDHSSFSTNLERLIDTDVARLLLAKVVEQARRAKLLSDEHFSVDGTLIEAWASIKSFR
PKDGPKPPVGRNTERDFHGEKLKNDTHASTTDPDARIARRSSGKEAKLSYHGHALMENRNGIIVDARITHATGTAERDTA
VEMIADVAGNKRITMGGDKGYDTKECVKDLRALKVTPHIAQNTANRRSAIDGRTTRHEGYKTSLRIRKRIEEAFGWLKTV
GNLRKTRHRGIAKVDWYFTMAIAAYNLVRLRNLGTKTA

Specific function: Unknown

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40407; Mature: 40407

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGAETKTEALFCYLSPESYVPKDHPLRSIRAMVDKALAELSPQFEAMYSHTGRPSIPPE
CCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHH
QLLKALLLQALYTIRSNRLLVEQISYSILFRWFVGLALDEKVWDHSSFSTNLERLIDTDV
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ARLLLAKVVEQARRAKLLSDEHFSVDGTLIEAWASIKSFRPKDGPKPPVGRNTERDFHGE
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH
KLKNDTHASTTDPDARIARRSSGKEAKLSYHGHALMENRNGIIVDARITHATGTAERDTA
HHCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCEEEECCCCEEEEEEEEECCCCCCHHHH
VEMIADVAGNKRITMGGDKGYDTKECVKDLRALKVTPHIAQNTANRRSAIDGRTTRHEGY
HHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCHHHHCCCHHHHHCCCCCCCCCCH
KTSLRIRKRIEEAFGWLKTVGNLRKTRHRGIAKVDWYFTMAIAAYNLVRLRNLGTKTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRGAETKTEALFCYLSPESYVPKDHPLRSIRAMVDKALAELSPQFEAMYSHTGRPSIPPE
CCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHH
QLLKALLLQALYTIRSNRLLVEQISYSILFRWFVGLALDEKVWDHSSFSTNLERLIDTDV
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ARLLLAKVVEQARRAKLLSDEHFSVDGTLIEAWASIKSFRPKDGPKPPVGRNTERDFHGE
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH
KLKNDTHASTTDPDARIARRSSGKEAKLSYHGHALMENRNGIIVDARITHATGTAERDTA
HHCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCEEEECCCCEEEEEEEEECCCCCCHHHH
VEMIADVAGNKRITMGGDKGYDTKECVKDLRALKVTPHIAQNTANRRSAIDGRTTRHEGY
HHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCHHHHCCCHHHHHCCCCCCCCCCH
KTSLRIRKRIEEAFGWLKTVGNLRKTRHRGIAKVDWYFTMAIAAYNLVRLRNLGTKTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA