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The map label for this gene is rfaF [C]

Identifier: 78224077

GI number: 78224077

Start: 3262218

End: 3263330

Strand: Reverse

Name: rfaF [C]

Synonym: Gmet_2881

Alternate gene names: 78224077

Gene position: 3263330-3262218 (Counterclockwise)

Preceding gene: 78224078

Following gene: 78224076

Centisome position: 81.64

GC content: 64.15

Gene sequence:

>1113_bases
ATGACACTGAGAAACGTCCGCACCGACTGTATCCATCTCGATGGCTACAAGCCGTGTCCTCCCCACAAGAGGAACGGCGT
CGTCTGTGGCAACTGTGCCGAGTACCGCCCGGCCCGCTCCCGGATTCTCATCTTGAAGGTGGGGGCCGCTGGCGAGGTGA
TCCGCAACACGCCGATCCTCCACCGGCTCCGCGCTCTCTACCCCGGCGCCGAGATCACGTGGATGACCGACTACCCCGAC
TTCATCCCCCGCTCCTTTGTCCAGAGGGTGCTGAAGTTCGACTGGAAGAACGCCCTGCTGGTTCAGGAGCAGGAGTACGA
CCTGCTCCTGAGTCTCGACAAGGACACCCAGGTCTGCGCCGTGGCGAATCGGGTCCGGGCGGCGGTGAAGAAGGGGTTCC
TCCTGGGCCCGCAGGGGAAGATCGTCCCCGCCGACGACGATGCCCGCCGCAAGTGGCTGACCGGGATCTTCGACGACCTG
ATGAAGGAGAACACCCGGCACTATGTGGAGGAGACCTTCGAGATCTGCGGTTGGGAGTGGGCGGGGGAGCGCTACATCCT
GGAGAACGTCCCCCGGGTCCCACTTTCGTTCCCCCGGACGGAGGGGCGGCCGCTGATTGGCCTCAACACTGGCGCCGGCA
GCATCTGGCCGACCCGCATCTGGCCCGAGGATAGTTGGCGGGATCTGGCAGCGGCGTTGCAGACGCGGGGGTACGACGTC
CTTCTTCTCGGCGGCCCCGATGAACACGAAAAGAATCTGCGGCTTGCGCGGGAGAGTGGAGCCCGCTACGAAGGGCTGAA
GAACTTCCTGGAGTTCTCGGGGTTGGTCGGCTGCTGTGACCTGGTGGTAACCGCCGTCACCATGGCGCTCCACATCGCCA
TCGCCCTGGAGCGCCGGATCGTGCTGCTGGACAACATCTTTAACGCTTCCGAGTTTTATCTCTACGGGCTCGGCTCCATT
GTGCAACCGGAGCTCGACTGTCTCGCCTGCTACAAGCGCGCCTTCGACGGGGGCTGCCCGGTGGAGGACTGCATGGAGCT
GATCAGCGTGGCGGATGTGGCGGCGGCGGTGGAAACGAACCTATCCGCACAGGAGCCGGTTTCAAGCCCATGA

Upstream 100 bases:

>100_bases
TGAAAATAGCAGGTAGAAAAGTGCCAGCCTCTATGTTATGGGACTTCTTCGGCTTTGCCGACTATGTCCTTGCAGTGAAA
AATTGAATTAGGATACCGAT

Downstream 100 bases:

>100_bases
TGCAGGCAAGACCAAAAATCCTGGCGCTTTACCCGCGGTTGCCGTCGATGGCGAGGGCGGCTGGTGAGAAGACGGCATTC
AAGTTCGTTGAGACCCTCCA

Product: ADP-heptose:LPS heptosyltransferase-like

Products: NA

Alternate protein names: ADP-HeptoseLPS Heptosyltransferase-Like; Heptosyltransferase; ADP-Heptose-LPS Heptosyltransferase II; Glycosyl Transferase Family Protein; Family 9 Glycosyl Transferase; Glycosyl Transferase

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MTLRNVRTDCIHLDGYKPCPPHKRNGVVCGNCAEYRPARSRILILKVGAAGEVIRNTPILHRLRALYPGAEITWMTDYPD
FIPRSFVQRVLKFDWKNALLVQEQEYDLLLSLDKDTQVCAVANRVRAAVKKGFLLGPQGKIVPADDDARRKWLTGIFDDL
MKENTRHYVEETFEICGWEWAGERYILENVPRVPLSFPRTEGRPLIGLNTGAGSIWPTRIWPEDSWRDLAAALQTRGYDV
LLLGGPDEHEKNLRLARESGARYEGLKNFLEFSGLVGCCDLVVTAVTMALHIAIALERRIVLLDNIFNASEFYLYGLGSI
VQPELDCLACYKRAFDGGCPVEDCMELISVADVAAAVETNLSAQEPVSSP

Sequences:

>Translated_370_residues
MTLRNVRTDCIHLDGYKPCPPHKRNGVVCGNCAEYRPARSRILILKVGAAGEVIRNTPILHRLRALYPGAEITWMTDYPD
FIPRSFVQRVLKFDWKNALLVQEQEYDLLLSLDKDTQVCAVANRVRAAVKKGFLLGPQGKIVPADDDARRKWLTGIFDDL
MKENTRHYVEETFEICGWEWAGERYILENVPRVPLSFPRTEGRPLIGLNTGAGSIWPTRIWPEDSWRDLAAALQTRGYDV
LLLGGPDEHEKNLRLARESGARYEGLKNFLEFSGLVGCCDLVVTAVTMALHIAIALERRIVLLDNIFNASEFYLYGLGSI
VQPELDCLACYKRAFDGGCPVEDCMELISVADVAAAVETNLSAQEPVSSP
>Mature_369_residues
TLRNVRTDCIHLDGYKPCPPHKRNGVVCGNCAEYRPARSRILILKVGAAGEVIRNTPILHRLRALYPGAEITWMTDYPDF
IPRSFVQRVLKFDWKNALLVQEQEYDLLLSLDKDTQVCAVANRVRAAVKKGFLLGPQGKIVPADDDARRKWLTGIFDDLM
KENTRHYVEETFEICGWEWAGERYILENVPRVPLSFPRTEGRPLIGLNTGAGSIWPTRIWPEDSWRDLAAALQTRGYDVL
LLGGPDEHEKNLRLARESGARYEGLKNFLEFSGLVGCCDLVVTAVTMALHIAIALERRIVLLDNIFNASEFYLYGLGSIV
QPELDCLACYKRAFDGGCPVEDCMELISVADVAAAVETNLSAQEPVSSP

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 41495; Mature: 41364

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRNVRTDCIHLDGYKPCPPHKRNGVVCGNCAEYRPARSRILILKVGAAGEVIRNTPIL
CCCCCCCCCEEEECCCCCCCCCCCCCEEECCCHHCCCCCCEEEEEEECCCCHHHHCCHHH
HRLRALYPGAEITWMTDYPDFIPRSFVQRVLKFDWKNALLVQEQEYDLLLSLDKDTQVCA
HHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCHHHH
VANRVRAAVKKGFLLGPQGKIVPADDDARRKWLTGIFDDLMKENTRHYVEETFEICGWEW
HHHHHHHHHHCCCEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AGERYILENVPRVPLSFPRTEGRPLIGLNTGAGSIWPTRIWPEDSWRDLAAALQTRGYDV
CCCEEHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEE
LLLGGPDEHEKNLRLARESGARYEGLKNFLEFSGLVGCCDLVVTAVTMALHIAIALERRI
EEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
VLLDNIFNASEFYLYGLGSIVQPELDCLACYKRAFDGGCPVEDCMELISVADVAAAVETN
EEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
LSAQEPVSSP
CCCCCCCCCC
>Mature Secondary Structure 
TLRNVRTDCIHLDGYKPCPPHKRNGVVCGNCAEYRPARSRILILKVGAAGEVIRNTPIL
CCCCCCCCEEEECCCCCCCCCCCCCEEECCCHHCCCCCCEEEEEEECCCCHHHHCCHHH
HRLRALYPGAEITWMTDYPDFIPRSFVQRVLKFDWKNALLVQEQEYDLLLSLDKDTQVCA
HHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCHHHH
VANRVRAAVKKGFLLGPQGKIVPADDDARRKWLTGIFDDLMKENTRHYVEETFEICGWEW
HHHHHHHHHHCCCEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AGERYILENVPRVPLSFPRTEGRPLIGLNTGAGSIWPTRIWPEDSWRDLAAALQTRGYDV
CCCEEHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEE
LLLGGPDEHEKNLRLARESGARYEGLKNFLEFSGLVGCCDLVVTAVTMALHIAIALERRI
EEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
VLLDNIFNASEFYLYGLGSIVQPELDCLACYKRAFDGGCPVEDCMELISVADVAAAVETN
EEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
LSAQEPVSSP
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA