| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is cysD [H]
Identifier: 78224055
GI number: 78224055
Start: 3238071
End: 3238976
Strand: Direct
Name: cysD [H]
Synonym: Gmet_2859
Alternate gene names: 78224055
Gene position: 3238071-3238976 (Clockwise)
Preceding gene: 78224054
Following gene: 78224056
Centisome position: 81.0
GC content: 60.6
Gene sequence:
>906_bases ATGAGAACCACGCTGACCCACCTGCAGCAGCTCGAAGCAGAAAGCATCCACATCATCCGAGAGGTGGTGGCCGAATTTGC CAACCCGGTGATGCTCTACTCCATCGGCAAGGATTCGGCGGTCATGCTGCACCTGGCACGCAAGGCCTTTTACCCGGCGC CGCCGCCGTTTCCCCTGCTGCACGTGGATACCACCTGGAAGTTCCGCGACATGATCCAATTCCGCGACCGGATGGCGGCC GAATGCGGCTTCGACCTGATCGTCCATGTGAACAAAGAGGGGGTGGAACAGGGGATTTCCCCATTCACCCACGGTTCAGC CCTCTACACCGATATCATGAAGACCGAGGGGTTGAAGCAGGCACTGGACAAGTACCGGTTCGACGCCGCCTTCGGTGGTG CCCGCCGTGACGAAGAAAAATCGCGGGCCAAGGAGAGGATCTTCTCCTTCCGCAGCGCCAACCACCGCTGGGATCCCAAA AACCAGCGCCCGGAACTCTGGAACCTTTACAACACCCGTATCAAGCAGGGGGAAAGCATCCGGGTCTTCCCGCTCTCCAA CTGGACCGAGTTGGATGTCTGGCAGTACATCCACCTGGAGAATATCCCGATCGTCCCCCTCTACTATGCTGCGGTGCGGC CGGTGGTGGAGCGCGACGGCATGCTGATCATGGTGGACGACGAACGCCTGGAACTCAAGCCGGGCGAGACCGTGCAGCAC AAGTCGGTACGCTTCCGCACCCTCGGCTGCTACCCCCTCACCGGCGCAGTGGAGTCAACGGCTGACACCCTCCCCAAGAT CATCCAGGAGATGCTCCTGACCCGCACCTCCGAGCGCCAGGGGCGACTCATCGACCACGACCAAGCGGGCTCAATGGAGA AGAAGAAGCAGGAGGGGTATTTCTAA
Upstream 100 bases:
>100_bases ATCCCCGAGCCGGACGATGGTGGTGGGAGAATCCGGAGCATAAAGAGTGCGGGTTGCACCGGCACTGATGGAAGGCACAA TCGTCTACGAGGATAACGAC
Downstream 100 bases:
>100_bases TGGCACATCAATCGGAACTGATCGAAAAGGATATCCTCGCCTATCTCAAAAGCCAGGAGGAGAAATCGCTGCTCCGCTTC ATCACCTGCGGCAGCGTTGA
Product: sulfate adenylyltransferase subunit 2
Products: NA
Alternate protein names: ATP-sulfurylase small subunit; Sulfate adenylate transferase; SAT [H]
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MRTTLTHLQQLEAESIHIIREVVAEFANPVMLYSIGKDSAVMLHLARKAFYPAPPPFPLLHVDTTWKFRDMIQFRDRMAA ECGFDLIVHVNKEGVEQGISPFTHGSALYTDIMKTEGLKQALDKYRFDAAFGGARRDEEKSRAKERIFSFRSANHRWDPK NQRPELWNLYNTRIKQGESIRVFPLSNWTELDVWQYIHLENIPIVPLYYAAVRPVVERDGMLIMVDDERLELKPGETVQH KSVRFRTLGCYPLTGAVESTADTLPKIIQEMLLTRTSERQGRLIDHDQAGSMEKKKQEGYF
Sequences:
>Translated_301_residues MRTTLTHLQQLEAESIHIIREVVAEFANPVMLYSIGKDSAVMLHLARKAFYPAPPPFPLLHVDTTWKFRDMIQFRDRMAA ECGFDLIVHVNKEGVEQGISPFTHGSALYTDIMKTEGLKQALDKYRFDAAFGGARRDEEKSRAKERIFSFRSANHRWDPK NQRPELWNLYNTRIKQGESIRVFPLSNWTELDVWQYIHLENIPIVPLYYAAVRPVVERDGMLIMVDDERLELKPGETVQH KSVRFRTLGCYPLTGAVESTADTLPKIIQEMLLTRTSERQGRLIDHDQAGSMEKKKQEGYF >Mature_301_residues MRTTLTHLQQLEAESIHIIREVVAEFANPVMLYSIGKDSAVMLHLARKAFYPAPPPFPLLHVDTTWKFRDMIQFRDRMAA ECGFDLIVHVNKEGVEQGISPFTHGSALYTDIMKTEGLKQALDKYRFDAAFGGARRDEEKSRAKERIFSFRSANHRWDPK NQRPELWNLYNTRIKQGESIRVFPLSNWTELDVWQYIHLENIPIVPLYYAAVRPVVERDGMLIMVDDERLELKPGETVQH KSVRFRTLGCYPLTGAVESTADTLPKIIQEMLLTRTSERQGRLIDHDQAGSMEKKKQEGYF
Specific function: First step in the sulfate activation pathway. This reaction occurs early in the reductive branch of the cysteine biosynthetic pathway. [C]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789109, Length=297, Percent_Identity=76.4309764309764, Blast_Score=480, Evalue=1e-137,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002500 - InterPro: IPR014729 - InterPro: IPR011784 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =2.7.7.4 [H]
Molecular weight: Translated: 34866; Mature: 34866
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTTLTHLQQLEAESIHIIREVVAEFANPVMLYSIGKDSAVMLHLARKAFYPAPPPFPLL CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEE HVDTTWKFRDMIQFRDRMAAECGFDLIVHVNKEGVEQGISPFTHGSALYTDIMKTEGLKQ EECCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCCCCCCCHHHHHHHHHHHHHHH ALDKYRFDAAFGGARRDEEKSRAKERIFSFRSANHRWDPKNQRPELWNLYNTRIKQGESI HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCE RVFPLSNWTELDVWQYIHLENIPIVPLYYAAVRPVVERDGMLIMVDDERLELKPGETVQH EEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCCCCC KSVRFRTLGCYPLTGAVESTADTLPKIIQEMLLTRTSERQGRLIDHDQAGSMEKKKQEGY CCEEEEEECCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCC F C >Mature Secondary Structure MRTTLTHLQQLEAESIHIIREVVAEFANPVMLYSIGKDSAVMLHLARKAFYPAPPPFPLL CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEE HVDTTWKFRDMIQFRDRMAAECGFDLIVHVNKEGVEQGISPFTHGSALYTDIMKTEGLKQ EECCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCCCCCCCHHHHHHHHHHHHHHH ALDKYRFDAAFGGARRDEEKSRAKERIFSFRSANHRWDPKNQRPELWNLYNTRIKQGESI HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCE RVFPLSNWTELDVWQYIHLENIPIVPLYYAAVRPVVERDGMLIMVDDERLELKPGETVQH EEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCCCCC KSVRFRTLGCYPLTGAVESTADTLPKIIQEMLLTRTSERQGRLIDHDQAGSMEKKKQEGY CCEEEEEECCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCC F C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA