| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is ilvK [H]
Identifier: 78224049
GI number: 78224049
Start: 3231731
End: 3232804
Strand: Reverse
Name: ilvK [H]
Synonym: Gmet_2853
Alternate gene names: 78224049
Gene position: 3232804-3231731 (Counterclockwise)
Preceding gene: 78224057
Following gene: 78224048
Centisome position: 80.87
GC content: 61.17
Gene sequence:
>1074_bases ATGGAGATCAGAATCGCGCCGCTCCCGGAGGGCCGGAAAAAGCCCAAGTACACCGACGAATCCCAGCTCGGTTTCGGCAA GCTCTTTACCGACCGGATGTTTATGGTCGAGTGGAAAATCGGCCAGGGGTGGGTCGATGCCCGGATTGAGCCCTATGCCC CCTTCGTCCTCGATCCGGCCTGCTCTGTTCTTCACTATGCCCAGGAGATCTTCGAGGGGCTCAAGGCCTACAAGTGGGCC GACGGCACCATCACCCTCTTCCGCCCCGAGATGAACGCTCGACGTTTCAACCACTCAGCCGATCGCCTCTGCATGCCAGA GGTGCCGGAGGAGCTTTTCCTTGACGGCATCGAGAAGCTCGTGGCGTTGGAGCGCGACTGGATTCCCTCGTCGGAAGGGA CCTCCCTCTACATCCGTCCCACCATGATCGGCGTGGACCCGGTCCTGGGGGTGAAGCCCGCTGATCACTACTACTTCTAC GTGATCCTCTCTCCTGTTGGTGCGTATTACTCCGCGGGGTTCAACCCCATCAAGATCATGGTGGAGGACCAGTACGTCCG CTCCGTCCCCGGCGGCACCGGGGAGGCCAAGACCGGCGGCAATTACGCCTGCTCCCTCAAGGCCGGCCTTGAGGCGAAGA AAAAGGGGTATGACCAGGTCCTCTGGCTCGACGGGGTCCACCGTCGCTATATTGAGGAAGTGGGGGCCATGAATATGCTC TTCGCCTATGGGAAGACCATTGTCACCGCTTCTCTCACCGGCACGATCCTGAACGGCGTCACCCGCGACTCCACCCTGAA GCTGGCTGCGAGCCTCGGCTACACCATCGAGGAGCGCCTCATCGACGTGAATGAGCTCATGGCGGACATTCGTGCCGGCA AGGTGACCGAGGCTTTCGGCAGCGGCACTGCTGCAGTCATCAGCCCGGTCGGCGTTCTTGCGTACAAGGACGAAGTCTGT ACGGTCGGCAATGGCGGCGTGGGGCCGATTACCCAGCAGCTCTACGATACTCTGACCGGCATTCAGACCGGCAAGGTTCC CGACACCTTCGGCTGGACCCGCAAGATCGCATGA
Upstream 100 bases:
>100_bases TGCCGGGGGAAACCCCTTGCCCCCTGTGGTATTCATGTGATAAACCGTAAAGAGTTTCATATTACGACGCTCCGCGCCGA ATCAATGGAGGTTTCAGCAG
Downstream 100 bases:
>100_bases TTCAGAGGGAATGGGCGGCGGAAACGCCGCCTTTTCTTTTGTCCCCACTTTCTGCTACTATTGAGGCAGCGGAGATATCA TTCGCACATCTCTATGAAGG
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT 2; Vegetative protein 85; VEG85 [H]
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MEIRIAPLPEGRKKPKYTDESQLGFGKLFTDRMFMVEWKIGQGWVDARIEPYAPFVLDPACSVLHYAQEIFEGLKAYKWA DGTITLFRPEMNARRFNHSADRLCMPEVPEELFLDGIEKLVALERDWIPSSEGTSLYIRPTMIGVDPVLGVKPADHYYFY VILSPVGAYYSAGFNPIKIMVEDQYVRSVPGGTGEAKTGGNYACSLKAGLEAKKKGYDQVLWLDGVHRRYIEEVGAMNML FAYGKTIVTASLTGTILNGVTRDSTLKLAASLGYTIEERLIDVNELMADIRAGKVTEAFGSGTAAVISPVGVLAYKDEVC TVGNGGVGPITQQLYDTLTGIQTGKVPDTFGWTRKIA
Sequences:
>Translated_357_residues MEIRIAPLPEGRKKPKYTDESQLGFGKLFTDRMFMVEWKIGQGWVDARIEPYAPFVLDPACSVLHYAQEIFEGLKAYKWA DGTITLFRPEMNARRFNHSADRLCMPEVPEELFLDGIEKLVALERDWIPSSEGTSLYIRPTMIGVDPVLGVKPADHYYFY VILSPVGAYYSAGFNPIKIMVEDQYVRSVPGGTGEAKTGGNYACSLKAGLEAKKKGYDQVLWLDGVHRRYIEEVGAMNML FAYGKTIVTASLTGTILNGVTRDSTLKLAASLGYTIEERLIDVNELMADIRAGKVTEAFGSGTAAVISPVGVLAYKDEVC TVGNGGVGPITQQLYDTLTGIQTGKVPDTFGWTRKIA >Mature_357_residues MEIRIAPLPEGRKKPKYTDESQLGFGKLFTDRMFMVEWKIGQGWVDARIEPYAPFVLDPACSVLHYAQEIFEGLKAYKWA DGTITLFRPEMNARRFNHSADRLCMPEVPEELFLDGIEKLVALERDWIPSSEGTSLYIRPTMIGVDPVLGVKPADHYYFY VILSPVGAYYSAGFNPIKIMVEDQYVRSVPGGTGEAKTGGNYACSLKAGLEAKKKGYDQVLWLDGVHRRYIEEVGAMNML FAYGKTIVTASLTGTILNGVTRDSTLKLAASLGYTIEERLIDVNELMADIRAGKVTEAFGSGTAAVISPVGVLAYKDEVC TVGNGGVGPITQQLYDTLTGIQTGKVPDTFGWTRKIA
Specific function: Transaminates branched-chain amino acids and ketoglutarate [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI38176287, Length=352, Percent_Identity=41.1931818181818, Blast_Score=254, Evalue=6e-68, Organism=Homo sapiens, GI296010906, Length=352, Percent_Identity=41.1931818181818, Blast_Score=254, Evalue=7e-68, Organism=Homo sapiens, GI296010904, Length=352, Percent_Identity=41.1931818181818, Blast_Score=254, Evalue=8e-68, Organism=Homo sapiens, GI50658084, Length=330, Percent_Identity=40.3030303030303, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI296010902, Length=352, Percent_Identity=36.6477272727273, Blast_Score=207, Evalue=9e-54, Organism=Homo sapiens, GI296010900, Length=352, Percent_Identity=36.6477272727273, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI258614015, Length=284, Percent_Identity=38.3802816901408, Blast_Score=196, Evalue=3e-50, Organism=Escherichia coli, GI48994963, Length=319, Percent_Identity=32.6018808777429, Blast_Score=124, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17568601, Length=370, Percent_Identity=38.3783783783784, Blast_Score=257, Evalue=7e-69, Organism=Caenorhabditis elegans, GI17565728, Length=349, Percent_Identity=33.5243553008596, Blast_Score=190, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6322608, Length=356, Percent_Identity=41.8539325842697, Blast_Score=268, Evalue=1e-72, Organism=Saccharomyces cerevisiae, GI6322002, Length=357, Percent_Identity=41.4565826330532, Blast_Score=263, Evalue=4e-71, Organism=Drosophila melanogaster, GI24641779, Length=355, Percent_Identity=38.8732394366197, Blast_Score=249, Evalue=1e-66,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 39353; Mature: 39353
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIRIAPLPEGRKKPKYTDESQLGFGKLFTDRMFMVEWKIGQGWVDARIEPYAPFVLDPA CEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEEEECCCEECCCCCCCCCEEECHH CSVLHYAQEIFEGLKAYKWADGTITLFRPEMNARRFNHSADRLCMPEVPEELFLDGIEKL HHHHHHHHHHHHHHHHEEECCCEEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHH VALERDWIPSSEGTSLYIRPTMIGVDPVLGVKPADHYYFYVILSPVGAYYSAGFNPIKIM HHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEECCHHHHHHCCCCEEEEE VEDQYVRSVPGGTGEAKTGGNYACSLKAGLEAKKKGYDQVLWLDGVHRRYIEEVGAMNML EECHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHCCCCEEEEECHHHHHHHHHHHHHHHH FAYGKTIVTASLTGTILNGVTRDSTLKLAASLGYTIEERLIDVNELMADIRAGKVTEAFG HHHCCEEEEEEHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHC SGTAAVISPVGVLAYKDEVCTVGNGGVGPITQQLYDTLTGIQTGKVPDTFGWTRKIA CCCCHHHCCCEEEEECCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEIRIAPLPEGRKKPKYTDESQLGFGKLFTDRMFMVEWKIGQGWVDARIEPYAPFVLDPA CEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEEEECCCEECCCCCCCCCEEECHH CSVLHYAQEIFEGLKAYKWADGTITLFRPEMNARRFNHSADRLCMPEVPEELFLDGIEKL HHHHHHHHHHHHHHHHEEECCCEEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHH VALERDWIPSSEGTSLYIRPTMIGVDPVLGVKPADHYYFYVILSPVGAYYSAGFNPIKIM HHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEECCHHHHHHCCCCEEEEE VEDQYVRSVPGGTGEAKTGGNYACSLKAGLEAKKKGYDQVLWLDGVHRRYIEEVGAMNML EECHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHCCCCEEEEECHHHHHHHHHHHHHHHH FAYGKTIVTASLTGTILNGVTRDSTLKLAASLGYTIEERLIDVNELMADIRAGKVTEAFG HHHCCEEEEEEHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHC SGTAAVISPVGVLAYKDEVCTVGNGGVGPITQQLYDTLTGIQTGKVPDTFGWTRKIA CCCCHHHCCCEEEEECCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 7934828; 9298659 [H]