| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78224033
Identifier: 78224033
GI number: 78224033
Start: 3216592
End: 3217302
Strand: Direct
Name: 78224033
Synonym: Gmet_2837
Alternate gene names: NA
Gene position: 3216592-3217302 (Clockwise)
Preceding gene: 161723102
Following gene: 78224034
Centisome position: 80.47
GC content: 57.67
Gene sequence:
>711_bases ATGCCGGAGAAACTGCTCGTGCCATCCATTGAACAGAGGCTCGCTGCAATGGTCGAGGTGTCCCGCCGGATGAGGGGTAA AACCGAGGCCGAAAAACGTATGGGGCGCAAGCCGACGATCACCATTTCACGGGAGTTCGGCTGCGAGGGGTATCCCGTGG CCGAGCAGCTCAGGGAGCTTCTCGAACACTCCACCAGGGAGCCCTGGGTCGTGATGGACAAGGCGCTTCTCGAAGAAGCC GCCAAACATCATGACATTTCCGAGACGGTTCTCCAATCCCTCGGCCAACGCCCCCGCTTCCTCGACGACATGATCTCCAC TCTCATGCCGCGCTGGAAAACCGAGCGGGACCACTACAAACTCCTCTGCGACCAGATCGTCTCCCTGGCCGAGGTGGGCA ACGTAATCATCATCGGGAGGGGAAGCTCCATCATCACCCAGCAGATGAACAACTGCCTCCATTTCCGCATCTATGCCTCC CACCATTTCAAAGTCCGCTCCATTGCGCGGCGCGCAAAGATTTCGATCCAGGACGCAGAGCTTCTGGTGGAAAAAATGCA GAAGGAACGGGTCAAGTTCATTCGCAGCTTCCTCGACCGGGACATTGCCGACCTGAACCTCTACCACATGGCCTTCAATA ACGACAAGAACTCGGAGGCCCAGATAGCCCGGGCCATCTTCGACTATCTCTGCCAGAAGATCGCAGGCTGA
Upstream 100 bases:
>100_bases CACAGGAACTCAACCCCCTTGACTAGAGGCCGGCACAGGGCACAATTGACACAGGGGTCCGCAACAGCATAAACAGAAAC GCGGACCGAAGGAGGATGCC
Downstream 100 bases:
>100_bases TTCCGAACCGCGCCAATCGAGGGAGGGCGGTGCCCGGCGCCGCTCTCCCCTTGCGCTCCCGGACGTCACCGTCTATACTC CCGCCATGCTCACGTTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MPEKLLVPSIEQRLAAMVEVSRRMRGKTEAEKRMGRKPTITISREFGCEGYPVAEQLRELLEHSTREPWVVMDKALLEEA AKHHDISETVLQSLGQRPRFLDDMISTLMPRWKTERDHYKLLCDQIVSLAEVGNVIIIGRGSSIITQQMNNCLHFRIYAS HHFKVRSIARRAKISIQDAELLVEKMQKERVKFIRSFLDRDIADLNLYHMAFNNDKNSEAQIARAIFDYLCQKIAG
Sequences:
>Translated_236_residues MPEKLLVPSIEQRLAAMVEVSRRMRGKTEAEKRMGRKPTITISREFGCEGYPVAEQLRELLEHSTREPWVVMDKALLEEA AKHHDISETVLQSLGQRPRFLDDMISTLMPRWKTERDHYKLLCDQIVSLAEVGNVIIIGRGSSIITQQMNNCLHFRIYAS HHFKVRSIARRAKISIQDAELLVEKMQKERVKFIRSFLDRDIADLNLYHMAFNNDKNSEAQIARAIFDYLCQKIAG >Mature_235_residues PEKLLVPSIEQRLAAMVEVSRRMRGKTEAEKRMGRKPTITISREFGCEGYPVAEQLRELLEHSTREPWVVMDKALLEEAA KHHDISETVLQSLGQRPRFLDDMISTLMPRWKTERDHYKLLCDQIVSLAEVGNVIIIGRGSSIITQQMNNCLHFRIYASH HFKVRSIARRAKISIQDAELLVEKMQKERVKFIRSFLDRDIADLNLYHMAFNNDKNSEAQIARAIFDYLCQKIAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27365; Mature: 27234
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEKLLVPSIEQRLAAMVEVSRRMRGKTEAEKRMGRKPTITISREFGCEGYPVAEQLREL CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHH LEHSTREPWVVMDKALLEEAAKHHDISETVLQSLGQRPRFLDDMISTLMPRWKTERDHYK HHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHH LLCDQIVSLAEVGNVIIIGRGSSIITQQMNNCLHFRIYASHHFKVRSIARRAKISIQDAE HHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCHHHHH LLVEKMQKERVKFIRSFLDRDIADLNLYHMAFNNDKNSEAQIARAIFDYLCQKIAG HHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PEKLLVPSIEQRLAAMVEVSRRMRGKTEAEKRMGRKPTITISREFGCEGYPVAEQLREL CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHH LEHSTREPWVVMDKALLEEAAKHHDISETVLQSLGQRPRFLDDMISTLMPRWKTERDHYK HHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHH LLCDQIVSLAEVGNVIIIGRGSSIITQQMNNCLHFRIYASHHFKVRSIARRAKISIQDAE HHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCHHHHH LLVEKMQKERVKFIRSFLDRDIADLNLYHMAFNNDKNSEAQIARAIFDYLCQKIAG HHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA