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The map label for this gene is mcp4 [H]

Identifier: 78224021

GI number: 78224021

Start: 3201197

End: 3202909

Strand: Reverse

Name: mcp4 [H]

Synonym: Gmet_2825

Alternate gene names: 78224021

Gene position: 3202909-3201197 (Counterclockwise)

Preceding gene: 78224022

Following gene: 78224020

Centisome position: 80.12

GC content: 59.25

Gene sequence:

>1713_bases
ATGAGAGTAACCAGGTACAAGAATTGGAAGATCCGGAACAAAATCATGTTCATAACAGTCCTCAGCGTCATACTGATGCT
GGGAGGGCTCTTCTCCTTTCTCCTGCCGAAACTCGAGACGAAGATCACCACAGAGAAGCGGGACGCAACGCGGCATGTGG
TGGAAACGGCCATGGCAGTCCTCGAAGTGGAGAACGAGCTGGTCAAGAGCGGCAAGGAGCCCCTCGCAGAGGCCCAGCTC
AAGGCTGCGAATATCCTCTCGAAGATGCGCTATGAGAAAAAGGAATACCTCTGGATCAATGACCTGGGAAATCCCCCCAA
AATGATCATGCATCCAACCCTCTCGGCACTCGATGGCAAGGTGCTGAATGACCCCAAGTTCAACAAGGCGACCGGCATGA
TCGAGGGAACGGACGGGAAGGAGATACCCCTCGACGGCAAGAACCTCTTTGTTGCCTTTGCGGAGGTGGTTCAGAAGGCG
GGGCACGGCTTCGTAAACTACGAATGGAACAAGCCCAAGGAGGGTGGGGGCACAACCTCCGAACTCTACCCCAAACTGTC
CTATGTCAAGAAGTTCGAGCCGTGGGGATGGGTGGTCGGAAGTGGCATTTACATCGACGACGTGGAAAAGGACATCAGCA
AGGTCCGGTGGATGTTCCTGGCCCTGAATGGCCTCATGGCCCTCATAAGCCTCCTCCTCGCCTATTTTGTGAGCCGAGGG
GTCACCCGGACCCTCGGCTACGTCGACACGAACCTGGATGATATGTCCAAGGGTGGCGGAGACCTCACCCGGCGCCTCGC
CGTGGAGCGGGAAGATGAAACCGGCTCGCTGGCCCGCTCTTTCAACCGTTTCCTCGACAACATGAAGGAGATCGTCCAGC
GGATCAATCAGAACGCCGTGGATGTGGCCTCATCGGCGGACCACCTCAACGAGACCGCGGGTCATATCGCCAGCGGGACG
GAGCGTGCTTCGACCCAGTCCACATCGGTGGCTATATCGTGCGAGGAGATGGCAGCCACCTCTTCCGAGATAGCCCACAA
CTGCATCCGGACCGTCGAGATAGCCAACCGTGCAACCCAGACAGCCCAGGACGGATCCCTGGTGGTGAGCCACGCGGTCA
GCAGCATCCAGCGCATTGCCCACAAGGTCCAGGAGTCGGCAAAAACCGTCGAATCCCTGGGTGTCAGGTCCGAACAGATC
GGCAATATCGTGGGGACCATCGAGGACATCGCCGACCAGACCAACCTCCTGGCCCTGAATGCGGCCATCGAGGCGGCACG
GGCCGGTGAACAGGGGCGCGGCTTCGCCGTGGTGGCCGATGAGGTGAGGGCCCTTGCGGAGCGCACCACCAAGGCCACCC
GCGAAATCTGCGAGATGATCAAGAGCATCCAGCAGGAGACCAAATTCGCCGTGGCCGCCATGGAGGAAGGGGTGCAAGAG
GTGGAAAAGGGGACTGCGGAAGCGGGCCGGTCAGGAGAGGCCCTCGAGGAAATTCTGGCCCAGGTGGCGGAGCTCACGAG
CCAGATCAACCAGATAGCAACTGCCGCCGAGCAGCAGAGCGCCACCACCAATGAGATCAGCAAGAGCATGTACGAGATAA
CCGCAGTGATATCCGATGCCTCGGGCAGCTCACAGAATACGGCCAATGCCGCAAGCCAGCTGGCCGGCATGGCAGACGAG
CTGAAGCGGATCGTGGCCCAGTTCAGGATGTAA

Upstream 100 bases:

>100_bases
GGATGATCGACTTTGTCCTTTCCGCCGAACGAATTGCCGACAAACTTGCCGAGCTCTTTAAATAAATCCATCCAACCGCA
TCCCAAAGGGGGAAAGGCAC

Downstream 100 bases:

>100_bases
CCGGCTCCGGATGGATGTCTTGACGGAACCACTCGGGGGCACAGCACTGTATGCCGGAGCTTAACATTGAGGAATTCAAA
CGGCGGCTCAGCATCTTTGT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 570; Mature: 570

Protein sequence:

>570_residues
MRVTRYKNWKIRNKIMFITVLSVILMLGGLFSFLLPKLETKITTEKRDATRHVVETAMAVLEVENELVKSGKEPLAEAQL
KAANILSKMRYEKKEYLWINDLGNPPKMIMHPTLSALDGKVLNDPKFNKATGMIEGTDGKEIPLDGKNLFVAFAEVVQKA
GHGFVNYEWNKPKEGGGTTSELYPKLSYVKKFEPWGWVVGSGIYIDDVEKDISKVRWMFLALNGLMALISLLLAYFVSRG
VTRTLGYVDTNLDDMSKGGGDLTRRLAVEREDETGSLARSFNRFLDNMKEIVQRINQNAVDVASSADHLNETAGHIASGT
ERASTQSTSVAISCEEMAATSSEIAHNCIRTVEIANRATQTAQDGSLVVSHAVSSIQRIAHKVQESAKTVESLGVRSEQI
GNIVGTIEDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAERTTKATREICEMIKSIQQETKFAVAAMEEGVQE
VEKGTAEAGRSGEALEEILAQVAELTSQINQIATAAEQQSATTNEISKSMYEITAVISDASGSSQNTANAASQLAGMADE
LKRIVAQFRM

Sequences:

>Translated_570_residues
MRVTRYKNWKIRNKIMFITVLSVILMLGGLFSFLLPKLETKITTEKRDATRHVVETAMAVLEVENELVKSGKEPLAEAQL
KAANILSKMRYEKKEYLWINDLGNPPKMIMHPTLSALDGKVLNDPKFNKATGMIEGTDGKEIPLDGKNLFVAFAEVVQKA
GHGFVNYEWNKPKEGGGTTSELYPKLSYVKKFEPWGWVVGSGIYIDDVEKDISKVRWMFLALNGLMALISLLLAYFVSRG
VTRTLGYVDTNLDDMSKGGGDLTRRLAVEREDETGSLARSFNRFLDNMKEIVQRINQNAVDVASSADHLNETAGHIASGT
ERASTQSTSVAISCEEMAATSSEIAHNCIRTVEIANRATQTAQDGSLVVSHAVSSIQRIAHKVQESAKTVESLGVRSEQI
GNIVGTIEDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAERTTKATREICEMIKSIQQETKFAVAAMEEGVQE
VEKGTAEAGRSGEALEEILAQVAELTSQINQIATAAEQQSATTNEISKSMYEITAVISDASGSSQNTANAASQLAGMADE
LKRIVAQFRM
>Mature_570_residues
MRVTRYKNWKIRNKIMFITVLSVILMLGGLFSFLLPKLETKITTEKRDATRHVVETAMAVLEVENELVKSGKEPLAEAQL
KAANILSKMRYEKKEYLWINDLGNPPKMIMHPTLSALDGKVLNDPKFNKATGMIEGTDGKEIPLDGKNLFVAFAEVVQKA
GHGFVNYEWNKPKEGGGTTSELYPKLSYVKKFEPWGWVVGSGIYIDDVEKDISKVRWMFLALNGLMALISLLLAYFVSRG
VTRTLGYVDTNLDDMSKGGGDLTRRLAVEREDETGSLARSFNRFLDNMKEIVQRINQNAVDVASSADHLNETAGHIASGT
ERASTQSTSVAISCEEMAATSSEIAHNCIRTVEIANRATQTAQDGSLVVSHAVSSIQRIAHKVQESAKTVESLGVRSEQI
GNIVGTIEDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAERTTKATREICEMIKSIQQETKFAVAAMEEGVQE
VEKGTAEAGRSGEALEEILAQVAELTSQINQIATAAEQQSATTNEISKSMYEITAVISDASGSSQNTANAASQLAGMADE
LKRIVAQFRM

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=387, Percent_Identity=30.4909560723514, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1787690, Length=359, Percent_Identity=29.8050139275766, Blast_Score=129, Evalue=5e-31,
Organism=Escherichia coli, GI1788194, Length=336, Percent_Identity=29.1666666666667, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1788195, Length=393, Percent_Identity=27.4809160305344, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1789453, Length=276, Percent_Identity=27.536231884058, Blast_Score=101, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 62218; Mature: 62218

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVTRYKNWKIRNKIMFITVLSVILMLGGLFSFLLPKLETKITTEKRDATRHVVETAMAV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LEVENELVKSGKEPLAEAQLKAANILSKMRYEKKEYLWINDLGNPPKMIMHPTLSALDGK
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEECCCHHHHCCC
VLNDPKFNKATGMIEGTDGKEIPLDGKNLFVAFAEVVQKAGHGFVNYEWNKPKEGGGTTS
CCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHH
ELYPKLSYVKKFEPWGWVVGSGIYIDDVEKDISKVRWMFLALNGLMALISLLLAYFVSRG
HHHHHHHHHHHCCCCCEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VTRTLGYVDTNLDDMSKGGGDLTRRLAVEREDETGSLARSFNRFLDNMKEIVQRINQNAV
HHHHHHHHCCCHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
DVASSADHLNETAGHIASGTERASTQSTSVAISCEEMAATSSEIAHNCIRTVEIANRATQ
HHHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
TAQDGSLVVSHAVSSIQRIAHKVQESAKTVESLGVRSEQIGNIVGTIEDIADQTNLLALN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEHHH
AAIEAARAGEQGRGFAVVADEVRALAERTTKATREICEMIKSIQQETKFAVAAMEEGVQE
HHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEKGTAEAGRSGEALEEILAQVAELTSQINQIATAAEQQSATTNEISKSMYEITAVISDA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
SGSSQNTANAASQLAGMADELKRIVAQFRM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRVTRYKNWKIRNKIMFITVLSVILMLGGLFSFLLPKLETKITTEKRDATRHVVETAMAV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LEVENELVKSGKEPLAEAQLKAANILSKMRYEKKEYLWINDLGNPPKMIMHPTLSALDGK
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEECCCHHHHCCC
VLNDPKFNKATGMIEGTDGKEIPLDGKNLFVAFAEVVQKAGHGFVNYEWNKPKEGGGTTS
CCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHH
ELYPKLSYVKKFEPWGWVVGSGIYIDDVEKDISKVRWMFLALNGLMALISLLLAYFVSRG
HHHHHHHHHHHCCCCCEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VTRTLGYVDTNLDDMSKGGGDLTRRLAVEREDETGSLARSFNRFLDNMKEIVQRINQNAV
HHHHHHHHCCCHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
DVASSADHLNETAGHIASGTERASTQSTSVAISCEEMAATSSEIAHNCIRTVEIANRATQ
HHHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
TAQDGSLVVSHAVSSIQRIAHKVQESAKTVESLGVRSEQIGNIVGTIEDIADQTNLLALN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEHHH
AAIEAARAGEQGRGFAVVADEVRALAERTTKATREICEMIKSIQQETKFAVAAMEEGVQE
HHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEKGTAEAGRSGEALEEILAQVAELTSQINQIATAAEQQSATTNEISKSMYEITAVISDA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
SGSSQNTANAASQLAGMADELKRIVAQFRM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]