Click here to switch to the map view.

The map label for this gene is 78223998

Identifier: 78223998

GI number: 78223998

Start: 3165428

End: 3165811

Strand: Reverse

Name: 78223998

Synonym: Gmet_2802

Alternate gene names: NA

Gene position: 3165811-3165428 (Counterclockwise)

Preceding gene: 78224000

Following gene: 78223997

Centisome position: 79.2

GC content: 50.26

Gene sequence:

>384_bases
ATGAGAGCATCTGGAGAAAAAATGAATGCGCGGGTAAAACTGAAACCGGGGCAGAAAGGAACCAAGAAATTGCTGGCGCA
ATACGGTGATTCTCTGGTTTGCGTCCGTTACCGGTATGACGTTGAAAAACGCAAGCAGGTGAAGACCGTCGAGCTCATTG
TAAGCGAGACTGACTGGACGCCACCGCCACCAAAATATCCTGAAAGCGCACTGGTACCGCTGCGGGTCGGGGTGACAGAA
AAGGCATTACAGGAACAGGTGAGAGTATTAGGTGGGCGATGGGATCGGGCGCAGCAGGTTTGGTTCGTCAGGTATGGGTG
TATCGCTGGTACGAAACTGGAAAAGTTAATAGTAGTAGAAACCAGGATGAACACTGCTAAATAG

Upstream 100 bases:

>100_bases
GTGGCAAACTTAGCGCGGCGCGGGTTACGGTGTTAAATAGAAAGTTCTCATAAAGTCTCTTTGTGGAGGCTGATATTCGT
GCTATAAGACACAAAAATTC

Downstream 100 bases:

>100_bases
ACGTGGCTTATAATAATATAAACAATGGAGGTTTATGGATATATAAACTTATTTCTAATACTAGAAACATGTTTATATTG
TCATAAACCAGACTCTAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MRASGEKMNARVKLKPGQKGTKKLLAQYGDSLVCVRYRYDVEKRKQVKTVELIVSETDWTPPPPKYPESALVPLRVGVTE
KALQEQVRVLGGRWDRAQQVWFVRYGCIAGTKLEKLIVVETRMNTAK

Sequences:

>Translated_127_residues
MRASGEKMNARVKLKPGQKGTKKLLAQYGDSLVCVRYRYDVEKRKQVKTVELIVSETDWTPPPPKYPESALVPLRVGVTE
KALQEQVRVLGGRWDRAQQVWFVRYGCIAGTKLEKLIVVETRMNTAK
>Mature_127_residues
MRASGEKMNARVKLKPGQKGTKKLLAQYGDSLVCVRYRYDVEKRKQVKTVELIVSETDWTPPPPKYPESALVPLRVGVTE
KALQEQVRVLGGRWDRAQQVWFVRYGCIAGTKLEKLIVVETRMNTAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14489; Mature: 14489

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRASGEKMNARVKLKPGQKGTKKLLAQYGDSLVCVRYRYDVEKRKQVKTVELIVSETDWT
CCCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHEEEEEEEECCCCC
PPPPKYPESALVPLRVGVTEKALQEQVRVLGGRWDRAQQVWFVRYGCIAGTKLEKLIVVE
CCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHEEEEEEECCCCCCCEEEEEEEE
TRMNTAK
ECCCCCC
>Mature Secondary Structure
MRASGEKMNARVKLKPGQKGTKKLLAQYGDSLVCVRYRYDVEKRKQVKTVELIVSETDWT
CCCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHEEEEEEEECCCCC
PPPPKYPESALVPLRVGVTEKALQEQVRVLGGRWDRAQQVWFVRYGCIAGTKLEKLIVVE
CCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHEEEEEEECCCCCCCEEEEEEEE
TRMNTAK
ECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA