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The map label for this gene is perM [H]

Identifier: 78223970

GI number: 78223970

Start: 3139095

End: 3140141

Strand: Reverse

Name: perM [H]

Synonym: Gmet_2774

Alternate gene names: 78223970

Gene position: 3140141-3139095 (Counterclockwise)

Preceding gene: 78223971

Following gene: 78223969

Centisome position: 78.55

GC content: 61.7

Gene sequence:

>1047_bases
ATGGGAGAGAGAGCACCGGCCGCGCAGAGGGGGATCATGTGGTTCCTTGCGGCCGCGGCCGTGATAGCCGCGGGCTATGC
CGTCAGCCACACCCTTTCCTGCTTTCTCCTCTCCTTTGTCCTCGCCTATCTCCTCGATCCGGCCGTGGTCCTCCTGGAGC
GGCGGGGCCTTCGCCGCAGTTGGGGGATCGTCGCCCTCTACCTGGTCCTCACGGTCCTCTCGCTCTTCTTTGTCGCCTTC
ATTGTCCCCTTTGCCAGCATCCGTTGGGAGGCGTTCCTCAAGGGACTTCCCGCCTACCTCCAGAAGGGGAAGGCGATCGT
CCTCTCCTGGAAGATGCAGGCTCTTCCCGCCGGTGCCGACGATGAGTGGCGCTGGCTCTTCGAGACGGCAACCGGCCAGA
TCGACAAGATGGCGGCACGCCTGGGCGCCGGCGTCTATGAGGCAGCCACGGGTTTTGTCTTCAACCTGTTCAACCTGGTC
CTGGCCCCCATTCTCATCTTCTTCATGCTCTGGTACAAGAATGAGATCAAGACCGGGATCATCACGTGGCTTCCCCGTTC
CCGGCGCGAAGCGGTCCTCACCCTGGGGCGGGAGATCAACGCCAGCGTCGGCGGCTACATCCGGGGACAGCTCATCGTTT
CGGCCATCGTGGCAATCCTTTCCATCATCGCCCTCTTCATTCTCGGTATCGATTATCCCTTCCTGAACGGCATCTTCGCC
GGCCTCGCGTCGGTTCTCCCCTTCATCGGGGTGATCCTGGCAACGCTTCCCCCGCTGTTCTTCGCCTATGTCCAGTACCA
GAGCGGTTTCGTGCTCTTGAAAGTCATCGGGGCCTTCGCGGTGATCTACTTCCTTGAGGGATACGTGGTGAAGCCTCTGG
TGTTCAAGGAGTCCATGGACCTCAACCCTCTCGTGACGATTATGGTCGTCATGCTCTTCGGAGAACTCATGGGGTTCTGG
GGGATCCTGCTCGCCATCCCCATCGCCGCGGCGGTCAGGATCGTCGCGGACCACGTGCGGCGCGGCGATCTTTCGGGAGG
GGCGTAA

Upstream 100 bases:

>100_bases
ATCAGGCGCTGGCTCGAAGAGCATGATCTCTTCGGAGCTGAAGAGGAATTCTAGGAGCCTGCCGGCCAGCGATGGCGGCA
TCACGGGAACGGGGACAACC

Downstream 100 bases:

>100_bases
GGTGCGCCCCCGGGACGCGGCCCATATCGCCTGGTTCCTGGCCGCCACCCTCGGGGTGGTGCTCCTGGCGGGTCACGTGG
CCCGCCACAGCCTTTCGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MGERAPAAQRGIMWFLAAAAVIAAGYAVSHTLSCFLLSFVLAYLLDPAVVLLERRGLRRSWGIVALYLVLTVLSLFFVAF
IVPFASIRWEAFLKGLPAYLQKGKAIVLSWKMQALPAGADDEWRWLFETATGQIDKMAARLGAGVYEAATGFVFNLFNLV
LAPILIFFMLWYKNEIKTGIITWLPRSRREAVLTLGREINASVGGYIRGQLIVSAIVAILSIIALFILGIDYPFLNGIFA
GLASVLPFIGVILATLPPLFFAYVQYQSGFVLLKVIGAFAVIYFLEGYVVKPLVFKESMDLNPLVTIMVVMLFGELMGFW
GILLAIPIAAAVRIVADHVRRGDLSGGA

Sequences:

>Translated_348_residues
MGERAPAAQRGIMWFLAAAAVIAAGYAVSHTLSCFLLSFVLAYLLDPAVVLLERRGLRRSWGIVALYLVLTVLSLFFVAF
IVPFASIRWEAFLKGLPAYLQKGKAIVLSWKMQALPAGADDEWRWLFETATGQIDKMAARLGAGVYEAATGFVFNLFNLV
LAPILIFFMLWYKNEIKTGIITWLPRSRREAVLTLGREINASVGGYIRGQLIVSAIVAILSIIALFILGIDYPFLNGIFA
GLASVLPFIGVILATLPPLFFAYVQYQSGFVLLKVIGAFAVIYFLEGYVVKPLVFKESMDLNPLVTIMVVMLFGELMGFW
GILLAIPIAAAVRIVADHVRRGDLSGGA
>Mature_347_residues
GERAPAAQRGIMWFLAAAAVIAAGYAVSHTLSCFLLSFVLAYLLDPAVVLLERRGLRRSWGIVALYLVLTVLSLFFVAFI
VPFASIRWEAFLKGLPAYLQKGKAIVLSWKMQALPAGADDEWRWLFETATGQIDKMAARLGAGVYEAATGFVFNLFNLVL
APILIFFMLWYKNEIKTGIITWLPRSRREAVLTLGREINASVGGYIRGQLIVSAIVAILSIIALFILGIDYPFLNGIFAG
LASVLPFIGVILATLPPLFFAYVQYQSGFVLLKVIGAFAVIYFLEGYVVKPLVFKESMDLNPLVTIMVVMLFGELMGFWG
ILLAIPIAAAVRIVADHVRRGDLSGGA

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=346, Percent_Identity=28.9017341040462, Blast_Score=122, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38163; Mature: 38032

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGERAPAAQRGIMWFLAAAAVIAAGYAVSHTLSCFLLSFVLAYLLDPAVVLLERRGLRRS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
WGIVALYLVLTVLSLFFVAFIVPFASIRWEAFLKGLPAYLQKGKAIVLSWKMQALPAGAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEEEHHHCCCCCC
DEWRWLFETATGQIDKMAARLGAGVYEAATGFVFNLFNLVLAPILIFFMLWYKNEIKTGI
CCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITWLPRSRREAVLTLGREINASVGGYIRGQLIVSAIVAILSIIALFILGIDYPFLNGIFA
HHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
GLASVLPFIGVILATLPPLFFAYVQYQSGFVLLKVIGAFAVIYFLEGYVVKPLVFKESMD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LNPLVTIMVVMLFGELMGFWGILLAIPIAAAVRIVADHVRRGDLSGGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GERAPAAQRGIMWFLAAAAVIAAGYAVSHTLSCFLLSFVLAYLLDPAVVLLERRGLRRS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH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CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]