Click here to switch to the map view.

The map label for this gene is yrrI [H]

Identifier: 78223969

GI number: 78223969

Start: 3138041

End: 3139093

Strand: Reverse

Name: yrrI [H]

Synonym: Gmet_2773

Alternate gene names: 78223969

Gene position: 3139093-3138041 (Counterclockwise)

Preceding gene: 78223970

Following gene: 78223968

Centisome position: 78.53

GC content: 63.25

Gene sequence:

>1053_bases
GTGCGCCCCCGGGACGCGGCCCATATCGCCTGGTTCCTGGCCGCCACCCTCGGGGTGGTGCTCCTGGCGGGTCACGTGGC
CCGCCACAGCCTTTCGGCAATCCTCACCTCCCTCGTCATCGCCTACCTGCTGAACCCCTTCATGAAGTGCCTGGAGCGCA
AGGGGCTCGGCCGTATCCCCGCCATCGCCATCCTCTACCTCTGCATCGCGGTGATTATGTTCTTTTCGCTCTTTGCGCTT
ATCCCGTACCTGAACCATCAGCTGGAAGCGTTTCCCCGGGCAGTCCCCCGCTACGTACAGAACCTGGAGAGGGTCATGGA
GGTGTGGAAGGCACGGCTTTCCCCCTATTACGGCAGCGACGAGGGGACATGGCTCATCGCCAGTGCCCAGGATTCCCTGA
AAAAACTGGCCCTGGACGTGTCGGGCAAGGGATACCAGGAGTTGAAGGCGGCCCTCTTCGGACTGTTCAACCTGGTCCTG
GCGCCGATCCTCGTCTTCTTCATGCTTTCCTCCAAGCAGTTCTTCAAGGATCTGATCCTCCGCTTCGTCCCCCACCGGGA
GCGCCACTCCTTCCGGGAGGTGGGGGGGCGGATCAAGGATTCCCTGGAGCGGTTCGTCATGGCCCAGTTCTTCGATTGCC
TCCTGGTGGGTATCCTGTCGGCCCTGGCCCTCTACCTCCTCGGGATCGAGTTTCCGCTCCTGAACGGCTTCGTGGCCGGG
TTCGCGTCGGTGGTCCCCTACGTGGGAGTGATGGTGGCGGTGATCCCCCCGGCTCTCATGGGGTACGCCGAGACCGGGGA
CCTCATGATCATTCCCAAGGTCTGCGCCGCCTACTTCGTCATCAACGTCATTATCGAGGGGAACCTCATCAAGCCGCTCC
TCATGCGGGGAACCCTGCGCCTGAACCCCCTGGCGGTGGTCTTCGCCCTTATGGCCCTGGGGGAGCTCATGGGGTTCTGG
GGGGTGGTGCTGGCGGTGCCGGTGGCGGCGGTGGTGAAGATCTGCGCCGTGGAGCTGAAGGGGTATCTGGTGGGAGGTGA
GAGGGATGCATAA

Upstream 100 bases:

>100_bases
ATGGGGTTCTGGGGGATCCTGCTCGCCATCCCCATCGCCGCGGCGGTCAGGATCGTCGCGGACCACGTGCGGCGCGGCGA
TCTTTCGGGAGGGGCGTAAG

Downstream 100 bases:

>100_bases
GACGATGTTCGGCATTACCGGGATGCACTGCGCCGGGTGCGCGGCCCGGATCGAGAAGGAGATCGGCCTGATGGACGGGG
TCGTCATGGCGGTGGTGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MRPRDAAHIAWFLAATLGVVLLAGHVARHSLSAILTSLVIAYLLNPFMKCLERKGLGRIPAIAILYLCIAVIMFFSLFAL
IPYLNHQLEAFPRAVPRYVQNLERVMEVWKARLSPYYGSDEGTWLIASAQDSLKKLALDVSGKGYQELKAALFGLFNLVL
APILVFFMLSSKQFFKDLILRFVPHRERHSFREVGGRIKDSLERFVMAQFFDCLLVGILSALALYLLGIEFPLLNGFVAG
FASVVPYVGVMVAVIPPALMGYAETGDLMIIPKVCAAYFVINVIIEGNLIKPLLMRGTLRLNPLAVVFALMALGELMGFW
GVVLAVPVAAVVKICAVELKGYLVGGERDA

Sequences:

>Translated_350_residues
MRPRDAAHIAWFLAATLGVVLLAGHVARHSLSAILTSLVIAYLLNPFMKCLERKGLGRIPAIAILYLCIAVIMFFSLFAL
IPYLNHQLEAFPRAVPRYVQNLERVMEVWKARLSPYYGSDEGTWLIASAQDSLKKLALDVSGKGYQELKAALFGLFNLVL
APILVFFMLSSKQFFKDLILRFVPHRERHSFREVGGRIKDSLERFVMAQFFDCLLVGILSALALYLLGIEFPLLNGFVAG
FASVVPYVGVMVAVIPPALMGYAETGDLMIIPKVCAAYFVINVIIEGNLIKPLLMRGTLRLNPLAVVFALMALGELMGFW
GVVLAVPVAAVVKICAVELKGYLVGGERDA
>Mature_350_residues
MRPRDAAHIAWFLAATLGVVLLAGHVARHSLSAILTSLVIAYLLNPFMKCLERKGLGRIPAIAILYLCIAVIMFFSLFAL
IPYLNHQLEAFPRAVPRYVQNLERVMEVWKARLSPYYGSDEGTWLIASAQDSLKKLALDVSGKGYQELKAALFGLFNLVL
APILVFFMLSSKQFFKDLILRFVPHRERHSFREVGGRIKDSLERFVMAQFFDCLLVGILSALALYLLGIEFPLLNGFVAG
FASVVPYVGVMVAVIPPALMGYAETGDLMIIPKVCAAYFVINVIIEGNLIKPLLMRGTLRLNPLAVVFALMALGELMGFW
GVVLAVPVAAVVKICAVELKGYLVGGERDA

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=307, Percent_Identity=26.3843648208469, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI87082271, Length=345, Percent_Identity=26.0869565217391, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38577; Mature: 38577

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPRDAAHIAWFLAATLGVVLLAGHVARHSLSAILTSLVIAYLLNPFMKCLERKGLGRIP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
AIAILYLCIAVIMFFSLFALIPYLNHQLEAFPRAVPRYVQNLERVMEVWKARLSPYYGSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EGTWLIASAQDSLKKLALDVSGKGYQELKAALFGLFNLVLAPILVFFMLSSKQFFKDLIL
CCCEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RFVPHRERHSFREVGGRIKDSLERFVMAQFFDCLLVGILSALALYLLGIEFPLLNGFVAG
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FASVVPYVGVMVAVIPPALMGYAETGDLMIIPKVCAAYFVINVIIEGNLIKPLLMRGTLR
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
LNPLAVVFALMALGELMGFWGVVLAVPVAAVVKICAVELKGYLVGGERDA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC
>Mature Secondary Structure
MRPRDAAHIAWFLAATLGVVLLAGHVARHSLSAILTSLVIAYLLNPFMKCLERKGLGRIP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
AIAILYLCIAVIMFFSLFALIPYLNHQLEAFPRAVPRYVQNLERVMEVWKARLSPYYGSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EGTWLIASAQDSLKKLALDVSGKGYQELKAALFGLFNLVLAPILVFFMLSSKQFFKDLIL
CCCEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RFVPHRERHSFREVGGRIKDSLERFVMAQFFDCLLVGILSALALYLLGIEFPLLNGFVAG
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FASVVPYVGVMVAVIPPALMGYAETGDLMIIPKVCAAYFVINVIIEGNLIKPLLMRGTLR
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
LNPLAVVFALMALGELMGFWGVVLAVPVAAVVKICAVELKGYLVGGERDA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]