| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78223952
Identifier: 78223952
GI number: 78223952
Start: 3115023
End: 3115298
Strand: Reverse
Name: 78223952
Synonym: Gmet_2756
Alternate gene names: NA
Gene position: 3115298-3115023 (Counterclockwise)
Preceding gene: 78223953
Following gene: 78223951
Centisome position: 77.93
GC content: 53.62
Gene sequence:
>276_bases ATGGGAAGCAGCAGACAAATGGGGCTCAGGCTTGATGAAACCGACAGCATGAACCTGAAGCGGATTGCTCAACGGGAAGG ACGCAACGAGCAGGACGTGCTCCGGGACTCGTTGCGTATGTACGTGCGGCACGCCGATGAGCAGAAGGAGTTCTTCGATT TGGTTGAGCGGGGCTGGTACGAACTTCGTTCCGGGTTGGGCACGGTCGTTTCGGAAAATGATGAATTCTTCGATACTTTA AGAAGAGAGCTGCGGAATGGCAAAACGTCCGCTTAA
Upstream 100 bases:
>100_bases ATCGTCCGACGTTGGCCCTCTGGATAGTGGAGATAGATATCTTGTCGGCTGGTATGCGGTGATGTGTATCGGTATTAATG ATACCGGGAAGGTGAAATGT
Downstream 100 bases:
>100_bases GCGTTCGCTGGAAAAAGCTCCTCTGCGCAAACAACTTTGCCGGTGTCGATGCGCCCTATCTGCTTGCCGGCCAACAGGTG GTGCTGAAAGAGTTGTATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MGSSRQMGLRLDETDSMNLKRIAQREGRNEQDVLRDSLRMYVRHADEQKEFFDLVERGWYELRSGLGTVVSENDEFFDTL RRELRNGKTSA
Sequences:
>Translated_91_residues MGSSRQMGLRLDETDSMNLKRIAQREGRNEQDVLRDSLRMYVRHADEQKEFFDLVERGWYELRSGLGTVVSENDEFFDTL RRELRNGKTSA >Mature_90_residues GSSRQMGLRLDETDSMNLKRIAQREGRNEQDVLRDSLRMYVRHADEQKEFFDLVERGWYELRSGLGTVVSENDEFFDTLR RELRNGKTSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10744; Mature: 10613
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSSRQMGLRLDETDSMNLKRIAQREGRNEQDVLRDSLRMYVRHADEQKEFFDLVERGWY CCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH ELRSGLGTVVSENDEFFDTLRRELRNGKTSA HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GSSRQMGLRLDETDSMNLKRIAQREGRNEQDVLRDSLRMYVRHADEQKEFFDLVERGWY CCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH ELRSGLGTVVSENDEFFDTLRRELRNGKTSA HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA