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The map label for this gene is 78223926

Identifier: 78223926

GI number: 78223926

Start: 3085781

End: 3087106

Strand: Reverse

Name: 78223926

Synonym: Gmet_2730

Alternate gene names: NA

Gene position: 3087106-3085781 (Counterclockwise)

Preceding gene: 78223927

Following gene: 78223923

Centisome position: 77.23

GC content: 64.86

Gene sequence:

>1326_bases
ATGAAACGAAAAACCCTTCCAAAACTCCTCTATGCCGACGCCAAGGGGAACATCTTCGACCACCCCGACCTCTGCATGGC
CGGCATGAGCGGCCCCGAGGCGGTGCTCCCCGAGGGGGTTGAGCTGATTCCGCTCCCCGAGGGGAGCCGGCTCTTCACCA
TCCCCGATACCCCGCCAGTTGCCTGGGACGAGAAGCAGCGGAAATTCGTGACCGTGCCCACGGTCCGGGAGGGGCGGCGA
AACCTGCCGGTGCAGGCGGTGTCGGCCTTCATGGCGCCGGGGTACGTGCGGACGCTGCTTCCCGCTTGCGATTACGGCAG
GAAGAAGGTGCACCTGCCGCTCTGGTCCTACACCGCCGTGGGGTGGGACGAGGAGCGGGACTGCTTCGTGGTGGCCGCCT
CAAGGGTGGATACCAACGACAACTGGAACCCGAACAACTACGACGACCGGAAGCTGGATCCCCTGGTGCGACAGCGGCTG
GCGGAGATGCCCAACAACCGCCTCCTGGAGCAGCTTGCCCGCTGCGCCGTGGATTACCACTGCTTCGCCGCCAAGAACCT
TTTCTTCCGCCGCTGGGAGGCGCCGCTACCCACGTCGCCGGCCTGCAACTCCCGGTGCCTGGGGTGCATCAGCCTCCAGC
CCTCGGACTGCTGCCCGTCCAATCACGAGCGGATCGGCTTCGTCCCCACGCCCGAGGAGATCGTGGAGCTGGCCCTGCCG
CACCTGGAGCAGGCGCCGGAGCCCATCGTCTCCTACGGCCAGGGGTGCGAGGGGGATCCCATCATGCAGGCCGACACCGT
GGCCGAGGCGACCCGGCGGCTGAAGAAGGCCACCAGCCGGGGAATCGTGAACTTCAACTCCAACGGCTCCTTCCTCGACC
GGATCGCCATGCTCTGCGACGCGGGGATGGACTCTATGCGCTTTTCCATGAATTCGGTGCGGGAGGAGTTTTACGACAAA
TACTACCGGCCGGTGGGGTACCGCTTCGCCGACGTGAAGGAATCGGTGCGGCTGGCCAAGGAACGGGGGCTTTTCGTGAT
GATCAACTACCTGGTCTCGCCAGGGCTCTCCGACAATGCCGACGAGGTGGAGGCGCTCCTGCGGTTCATCGGCGACACCG
GCCTGGACATGATCCAGATGCGGAACCTCTCCATCGATCCCGACTTCTACAATAAACGGATGGGGGTCACGGGACGGGGG
ATCGGCATGTACCGGATGCTGGAGCGGGTGAAGCGGGAGTTTCCCCGGATCCAGTACGGCTACTACAACCGGACCCGGGA
GAACTTCTACCCCGAGGGACTGGAGAAGAGCTGGCCGATCCGCTGA

Upstream 100 bases:

>100_bases
TCGTCATCCTCGGCGCCGGAGCGCTGGGGTATTTTCTTCATTTTTCCTGAAAGATCATGGCCGGTTGGCAACGCTCACCG
GTCCGTGGTAAGGTAACGCC

Downstream 100 bases:

>100_bases
CTTCGACTTTCCAACGCTGTTGAACGAAAAAGAGGCTTCCCGAACAGGAAGCCTCTTTCTGCGCGTAACGAATGGGCGTG
TCGGTTCAGTTCTTGTTCCG

Product: radical SAM family protein

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Radical SAM Family Protein; Elongator /MiaB/NifB; Radical Sam Domain Protein; Radical SAM Domain Family Protein

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MKRKTLPKLLYADAKGNIFDHPDLCMAGMSGPEAVLPEGVELIPLPEGSRLFTIPDTPPVAWDEKQRKFVTVPTVREGRR
NLPVQAVSAFMAPGYVRTLLPACDYGRKKVHLPLWSYTAVGWDEERDCFVVAASRVDTNDNWNPNNYDDRKLDPLVRQRL
AEMPNNRLLEQLARCAVDYHCFAAKNLFFRRWEAPLPTSPACNSRCLGCISLQPSDCCPSNHERIGFVPTPEEIVELALP
HLEQAPEPIVSYGQGCEGDPIMQADTVAEATRRLKKATSRGIVNFNSNGSFLDRIAMLCDAGMDSMRFSMNSVREEFYDK
YYRPVGYRFADVKESVRLAKERGLFVMINYLVSPGLSDNADEVEALLRFIGDTGLDMIQMRNLSIDPDFYNKRMGVTGRG
IGMYRMLERVKREFPRIQYGYYNRTRENFYPEGLEKSWPIR

Sequences:

>Translated_441_residues
MKRKTLPKLLYADAKGNIFDHPDLCMAGMSGPEAVLPEGVELIPLPEGSRLFTIPDTPPVAWDEKQRKFVTVPTVREGRR
NLPVQAVSAFMAPGYVRTLLPACDYGRKKVHLPLWSYTAVGWDEERDCFVVAASRVDTNDNWNPNNYDDRKLDPLVRQRL
AEMPNNRLLEQLARCAVDYHCFAAKNLFFRRWEAPLPTSPACNSRCLGCISLQPSDCCPSNHERIGFVPTPEEIVELALP
HLEQAPEPIVSYGQGCEGDPIMQADTVAEATRRLKKATSRGIVNFNSNGSFLDRIAMLCDAGMDSMRFSMNSVREEFYDK
YYRPVGYRFADVKESVRLAKERGLFVMINYLVSPGLSDNADEVEALLRFIGDTGLDMIQMRNLSIDPDFYNKRMGVTGRG
IGMYRMLERVKREFPRIQYGYYNRTRENFYPEGLEKSWPIR
>Mature_441_residues
MKRKTLPKLLYADAKGNIFDHPDLCMAGMSGPEAVLPEGVELIPLPEGSRLFTIPDTPPVAWDEKQRKFVTVPTVREGRR
NLPVQAVSAFMAPGYVRTLLPACDYGRKKVHLPLWSYTAVGWDEERDCFVVAASRVDTNDNWNPNNYDDRKLDPLVRQRL
AEMPNNRLLEQLARCAVDYHCFAAKNLFFRRWEAPLPTSPACNSRCLGCISLQPSDCCPSNHERIGFVPTPEEIVELALP
HLEQAPEPIVSYGQGCEGDPIMQADTVAEATRRLKKATSRGIVNFNSNGSFLDRIAMLCDAGMDSMRFSMNSVREEFYDK
YYRPVGYRFADVKESVRLAKERGLFVMINYLVSPGLSDNADEVEALLRFIGDTGLDMIQMRNLSIDPDFYNKRMGVTGRG
IGMYRMLERVKREFPRIQYGYYNRTRENFYPEGLEKSWPIR

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50281; Mature: 50281

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKTLPKLLYADAKGNIFDHPDLCMAGMSGPEAVLPEGVELIPLPEGSRLFTIPDTPPV
CCCCCCCHHHEECCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCC
AWDEKQRKFVTVPTVREGRRNLPVQAVSAFMAPGYVRTLLPACDYGRKKVHLPLWSYTAV
CCCCCCCEEEECCCHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEEEEEEC
GWDEERDCFVVAASRVDTNDNWNPNNYDDRKLDPLVRQRLAEMPNNRLLEQLARCAVDYH
CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
CFAAKNLFFRRWEAPLPTSPACNSRCLGCISLQPSDCCPSNHERIGFVPTPEEIVELALP
HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCHHHHHHHHHH
HLEQAPEPIVSYGQGCEGDPIMQADTVAEATRRLKKATSRGIVNFNSNGSFLDRIAMLCD
HHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHH
AGMDSMRFSMNSVREEFYDKYYRPVGYRFADVKESVRLAKERGLFVMINYLVSPGLSDNA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCH
DEVEALLRFIGDTGLDMIQMRNLSIDPDFYNKRMGVTGRGIGMYRMLERVKREFPRIQYG
HHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEC
YYNRTRENFYPEGLEKSWPIR
CCCCCHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRKTLPKLLYADAKGNIFDHPDLCMAGMSGPEAVLPEGVELIPLPEGSRLFTIPDTPPV
CCCCCCCHHHEECCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCC
AWDEKQRKFVTVPTVREGRRNLPVQAVSAFMAPGYVRTLLPACDYGRKKVHLPLWSYTAV
CCCCCCCEEEECCCHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEEEEEEC
GWDEERDCFVVAASRVDTNDNWNPNNYDDRKLDPLVRQRLAEMPNNRLLEQLARCAVDYH
CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
CFAAKNLFFRRWEAPLPTSPACNSRCLGCISLQPSDCCPSNHERIGFVPTPEEIVELALP
HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCHHHHHHHHHH
HLEQAPEPIVSYGQGCEGDPIMQADTVAEATRRLKKATSRGIVNFNSNGSFLDRIAMLCD
HHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHH
AGMDSMRFSMNSVREEFYDKYYRPVGYRFADVKESVRLAKERGLFVMINYLVSPGLSDNA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCH
DEVEALLRFIGDTGLDMIQMRNLSIDPDFYNKRMGVTGRGIGMYRMLERVKREFPRIQYG
HHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEC
YYNRTRENFYPEGLEKSWPIR
CCCCCHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA