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The map label for this gene is 78223878

Identifier: 78223878

GI number: 78223878

Start: 3029684

End: 3030427

Strand: Reverse

Name: 78223878

Synonym: Gmet_2682

Alternate gene names: NA

Gene position: 3030427-3029684 (Counterclockwise)

Preceding gene: 78223879

Following gene: 78223877

Centisome position: 75.81

GC content: 54.97

Gene sequence:

>744_bases
GTGAAACGTCTACTTGTGCTGATCGTCATGGCGCTCTTTTCCCTCACAGCCTGTGCCGTAACCGACGCCTCCCGGAAGCA
AGCATCCTATCACTTTCAAATGGGTCTTTCCTATCTAGGGGAAAACGATGCGACCCGTGCCCTTATCGAACTCGCTGAAG
CGGAGAAGCTAACCCCCGATGATCCCGCCCTCCTGAACAGCCTCGGCCTCGCCTATTTCTACAAAAAACGGTACGATCTC
GCCGAACTCAAGTATCGTAGGGCTATCGAGCTGAAGCCCGATTATTCCGAGGCCAGGAACAACCTGGGGGTGAACTACCT
GGAGATGCAGCGGTGGGATGATGCCGTGGCCCAGTTCACGTTGGTTCTGGCCGATCTGTTCTTCATCAACCATGAGGACG
CCCGGATTAACCTCGGTCTCGCCTATCTGGGCAAGGGCGATTATCCGAAGTCACTCGACATTCTGCGTCAGGCGGTTGCA
ACCTCTCCCCAGAACATTGTCGCCCGGGTTGGCCTCGGCCGGGTATACTTTGCCATGGACCGCAACGATCTGGCGATTCA
GGAATTCACCAAGGCCGTTGAGCTTAACAAGAATTATCAGAACGGATACTACTATCTTGCCCTTGCCCATCTGAAGGGTA
AAGACTATGTGTCTGCAGCCGATGCGTTCCGCGAGGCGATCCGGATAGCACCCGATTCGGAGAAGGGGCGTCTTTCCCGG
GAATATCTGGAATCAATGCGCTGA

Upstream 100 bases:

>100_bases
CAAATCTGTTACGGTTCACGGGGCGTGAACAGGCTTTCTGAGCCGGTTTTCGCTCCTCACAGACAGCTCTGCTTTCAATT
TCCCGGCTTGAGGTGATAAC

Downstream 100 bases:

>100_bases
GAGGTTCACTTGTCTGACGCGCTCACCCCCGGGAAAGGGGGAACATCCATTGGTATCCTGCTGCGAGAGACCCGCGAGTC
CCGTGGGGAGTCGCGGGAGG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Type IV Pilus Biogenesis/Stability Protein PilW; Tetratricopeptide Repeat Domain Protein; TPR Domain Containing Protein; TPR Domain Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Protein; Peptidase; Social Gliding Motility Protein Tgl; Tetratricopeptide Tpr_1 Repeat-Containing Protein; TPR Repeat; TPR Repeat-Containing Methyltransferase; TPR Repeat Domain Protein; Sporulation Domain-Containing Protein; Zn-Dependent Protease; Protein Kinase; Glycosyl Transferase Family Protein

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKRLLVLIVMALFSLTACAVTDASRKQASYHFQMGLSYLGENDATRALIELAEAEKLTPDDPALLNSLGLAYFYKKRYDL
AELKYRRAIELKPDYSEARNNLGVNYLEMQRWDDAVAQFTLVLADLFFINHEDARINLGLAYLGKGDYPKSLDILRQAVA
TSPQNIVARVGLGRVYFAMDRNDLAIQEFTKAVELNKNYQNGYYYLALAHLKGKDYVSAADAFREAIRIAPDSEKGRLSR
EYLESMR

Sequences:

>Translated_247_residues
MKRLLVLIVMALFSLTACAVTDASRKQASYHFQMGLSYLGENDATRALIELAEAEKLTPDDPALLNSLGLAYFYKKRYDL
AELKYRRAIELKPDYSEARNNLGVNYLEMQRWDDAVAQFTLVLADLFFINHEDARINLGLAYLGKGDYPKSLDILRQAVA
TSPQNIVARVGLGRVYFAMDRNDLAIQEFTKAVELNKNYQNGYYYLALAHLKGKDYVSAADAFREAIRIAPDSEKGRLSR
EYLESMR
>Mature_247_residues
MKRLLVLIVMALFSLTACAVTDASRKQASYHFQMGLSYLGENDATRALIELAEAEKLTPDDPALLNSLGLAYFYKKRYDL
AELKYRRAIELKPDYSEARNNLGVNYLEMQRWDDAVAQFTLVLADLFFINHEDARINLGLAYLGKGDYPKSLDILRQAVA
TSPQNIVARVGLGRVYFAMDRNDLAIQEFTKAVELNKNYQNGYYYLALAHLKGKDYVSAADAFREAIRIAPDSEKGRLSR
EYLESMR

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28074; Mature: 28074

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLLVLIVMALFSLTACAVTDASRKQASYHFQMGLSYLGENDATRALIELAEAEKLTPD
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
DPALLNSLGLAYFYKKRYDLAELKYRRAIELKPDYSEARNNLGVNYLEMQRWDDAVAQFT
CHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHH
LVLADLFFINHEDARINLGLAYLGKGDYPKSLDILRQAVATSPQNIVARVGLGRVYFAMD
HHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEC
RNDLAIQEFTKAVELNKNYQNGYYYLALAHLKGKDYVSAADAFREAIRIAPDSEKGRLSR
CCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHH
EYLESMR
HHHHHCC
>Mature Secondary Structure
MKRLLVLIVMALFSLTACAVTDASRKQASYHFQMGLSYLGENDATRALIELAEAEKLTPD
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
DPALLNSLGLAYFYKKRYDLAELKYRRAIELKPDYSEARNNLGVNYLEMQRWDDAVAQFT
CHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHH
LVLADLFFINHEDARINLGLAYLGKGDYPKSLDILRQAVATSPQNIVARVGLGRVYFAMD
HHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEC
RNDLAIQEFTKAVELNKNYQNGYYYLALAHLKGKDYVSAADAFREAIRIAPDSEKGRLSR
CCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHH
EYLESMR
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA